RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
SMARCC2-205ENST00000548130 ZBTB38Q8NAP3 1195 aaPredicted RBP11.33□□□□□ -0.6
SMARCC2-205ENST00000548130 RPGRQ92834 1020 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-205ENST00000548130 ZBED9Q6R2W3 1325 aa11.33□□□□□ -0.6
SMARCC2-205ENST00000548130 NEURL1BA8MQ27 555 aa11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 PCCAP05165 728 aaPredicted RBP11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 NUBP1P53384 320 aa11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 RASSF7Q02833 373 aa11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 SMC4Q9NTJ3 1288 aa11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 TNRC6CQ9HCJ0 1690 aaKnown RBP11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 RIC1Q4ADV7 1423 aa11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 COL11A2P13942 1736 aaPredicted RBP11.32□□□□□ -0.6
SMARCC2-205ENST00000548130 CT47B1P0C2W7 299 aaPredicted RBP11.31□□□□□ -0.6
SMARCC2-205ENST00000548130 ALDH1B1P30837 517 aa11.31□□□□□ -0.6
SMARCC2-205ENST00000548130 ALDH1L2Q3SY69 923 aa11.31□□□□□ -0.6
SMARCC2-205ENST00000548130 SLC4A10Q6U841 1118 aa11.31□□□□□ -0.6
SMARCC2-205ENST00000548130 OLFM4Q6UX06 510 aa11.31□□□□□ -0.6
SMARCC2-205ENST00000548130 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
SMARCC2-205ENST00000548130 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
SMARCC2-205ENST00000548130 ARFGEF2Q9Y6D5 1785 aa11.31□□□□□ -0.6
SMARCC2-205ENST00000548130 BRCA1P38398 1863 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-205ENST00000548130 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-205ENST00000548130 RARSP54136 660 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-205ENST00000548130 GCKRQ14397 625 aa11.3□□□□□ -0.6
SMARCC2-205ENST00000548130 BEND3Q5T5X7 828 aa11.3□□□□□ -0.6
SMARCC2-205ENST00000548130 LINS1Q8NG48 757 aa11.3□□□□□ -0.6
SMARCC2-205ENST00000548130 C7orf43Q8WVR3 580 aa11.3□□□□□ -0.6
SMARCC2-205ENST00000548130 CRAMP1Q96RY5 1269 aa11.3□□□□□ -0.6
SMARCC2-205ENST00000548130 ANKRD36CQ5JPF3 1778 aa11.3□□□□□ -0.6
SMARCC2-205ENST00000548130 H7C1W4 665 aa11.29□□□□□ -0.6
SMARCC2-205ENST00000548130 NFKBIEO00221 500 aa11.29□□□□□ -0.6
SMARCC2-205ENST00000548130 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
SMARCC2-205ENST00000548130 DDX46Q7L014 1031 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-205ENST00000548130 UBE3BQ7Z3V4 1068 aa11.29□□□□□ -0.6
SMARCC2-205ENST00000548130 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
SMARCC2-205ENST00000548130 CCDC85AQ96PX6 553 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-205ENST00000548130 ABCC4O15439 1325 aa11.29□□□□□ -0.6
SMARCC2-205ENST00000548130 PPEF1O14829 653 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 PDE8AO60658 829 aa11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 PRELPP51888 382 aa11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 SF3B3Q15393 1217 aaKnown RBP11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 CCDC93Q567U6 631 aa11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 KIF12Q96FN5 646 aa11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 RNF181Q9P0P0 153 aa11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 NOB1Q9ULX3 412 aaKnown RBP11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 PTPRCP08575 1304 aa11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 DLEC1Q9Y238 1755 aa11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 SLX4Q8IY92 1834 aa11.28□□□□□ -0.6
SMARCC2-205ENST00000548130 HSP90B1P14625 803 aaKnown RBP11.27□□□□□ -0.61
SMARCC2-205ENST00000548130 GRAPQ13588 217 aa11.27□□□□□ -0.61
SMARCC2-205ENST00000548130 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
SMARCC2-205ENST00000548130 GRAPLQ8TC17 118 aaPredicted RBP11.27□□□□□ -0.61
SMARCC2-205ENST00000548130 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.61
SMARCC2-205ENST00000548130 SRCIN1Q9C0H9 1055 aa11.27□□□□□ -0.61
SMARCC2-205ENST00000548130 TAOK3Q9H2K8 898 aa11.27□□□□□ -0.61
SMARCC2-205ENST00000548130 SEC31BQ9NQW1 1179 aa11.27□□□□□ -0.61
SMARCC2-205ENST00000548130 BCAR3O75815 825 aa11.26□□□□□ -0.61
SMARCC2-205ENST00000548130 ALDH1L1O75891 902 aa11.26□□□□□ -0.61
SMARCC2-205ENST00000548130 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-205ENST00000548130 CASP7P55210 303 aa11.26□□□□□ -0.61
SMARCC2-205ENST00000548130 CTSWP56202 376 aa11.26□□□□□ -0.61
SMARCC2-205ENST00000548130 CCDC152Q4G0S7 254 aa11.26□□□□□ -0.61
SMARCC2-205ENST00000548130 UTRNP46939 3433 aa11.26□□□□□ -0.61
SMARCC2-205ENST00000548130 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 CACNA1FO60840 1977 aa11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 GRM8O00222 908 aa11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 BBOX1O75936 387 aa11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 LMNB1P20700 586 aa11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 ZNF526Q8TF50 670 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 ZNF277Q9NRM2 450 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 C9orf78Q9NZ63 289 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 ATP6V0A2Q9Y487 856 aa11.25□□□□□ -0.61
SMARCC2-205ENST00000548130 FKBP4Q02790 459 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 CC2D2BQ6DHV5 1058 aa11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 SP8Q8IXZ3 490 aa11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 TTLL11Q8NHH1 800 aa11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 YTHDC1Q96MU7 727 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 PLA2G12BQ9BX93 195 aa11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 API5Q9BZZ5 524 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 TMX4Q9H1E5 349 aaPredicted RBP11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 GREM2Q9H772 168 aa11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 GOLGB1Q14789 3259 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 LTBP3Q9NS15 1303 aa11.24□□□□□ -0.61
SMARCC2-205ENST00000548130 CHD4Q14839 1912 aa11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 C1QTNF8P60827 252 aa11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 RPS8P62241 208 aaKnown RBP11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 EPHA10Q5JZY3 1008 aa11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 LHX8Q68G74 356 aa11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 SUCLG2Q96I99 432 aa11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 TNNQ9UQP3 1299 aa11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 CHMP3Q9Y3E7 222 aa11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 KIF16BQ96L93 1317 aa11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
SMARCC2-205ENST00000548130 MAP3K13O43283 966 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms