RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 DUSP27Q5VZP5 1158 aa26.48■■□□□ 1.83
SSH1-207ENST00000547862 MBIPQ9NS73 344 aa26.48■■□□□ 1.83
SSH1-207ENST00000547862 BBOX1O75936 387 aa26.47■■□□□ 1.83
SSH1-207ENST00000547862 SP8Q8IXZ3 490 aa26.47■■□□□ 1.83
SSH1-207ENST00000547862 AIDAQ96BJ3 306 aa26.47■■□□□ 1.83
SSH1-207ENST00000547862 DBF4Q9UBU7 674 aaPredicted RBP26.47■■□□□ 1.83
SSH1-207ENST00000547862 HOXB7P09629 217 aa26.46■■□□□ 1.83
SSH1-207ENST00000547862 ANKRD13DQ6ZTN6 518 aa26.46■■□□□ 1.83
SSH1-207ENST00000547862 PAXIP1Q6ZW49 1069 aaPredicted RBP26.46■■□□□ 1.83
SSH1-207ENST00000547862 FAM89AQ96GI7 184 aa26.46■■□□□ 1.83
SSH1-207ENST00000547862 CFAP44Q96MT7 982 aa26.46■■□□□ 1.83
SSH1-207ENST00000547862 PRKRIP1Q9H875 184 aaPredicted RBP26.46■■□□□ 1.83
SSH1-207ENST00000547862 ZNRF3Q9ULT6 936 aa26.46■■□□□ 1.83
SSH1-207ENST00000547862 RAD17O75943 681 aa26.45■■□□□ 1.82
SSH1-207ENST00000547862 CXCL9Q07325 125 aa26.45■■□□□ 1.82
SSH1-207ENST00000547862 RTFDC1Q9BY42 306 aaPredicted RBP26.45■■□□□ 1.82
SSH1-207ENST00000547862 GPRC5DQ9NZD1 345 aa26.45■■□□□ 1.82
SSH1-207ENST00000547862 TRAF5O00463 557 aa26.44■■□□□ 1.82
SSH1-207ENST00000547862 GMPSP49915 693 aaPredicted RBP26.44■■□□□ 1.82
SSH1-207ENST00000547862 GRM1Q13255 1194 aa26.44■■□□□ 1.82
SSH1-207ENST00000547862 DEFB115Q30KQ5 88 aa26.44■■□□□ 1.82
SSH1-207ENST00000547862 USP50Q70EL3 339 aaPredicted RBP26.44■■□□□ 1.82
SSH1-207ENST00000547862 APAF1O14727 1248 aa26.43■■□□□ 1.82
SSH1-207ENST00000547862 CIAPIN1Q6FI81 312 aa26.43■■□□□ 1.82
SSH1-207ENST00000547862 ISCA1Q9BUE6 129 aa26.43■■□□□ 1.82
SSH1-207ENST00000547862 BCL2L13Q9BXK5 485 aa26.43■■□□□ 1.82
SSH1-207ENST00000547862 VPS33BQ9H267 617 aa26.43■■□□□ 1.82
SSH1-207ENST00000547862 ADARB2Q9NS39 739 aaKnown RBP26.43■■□□□ 1.82
SSH1-207ENST00000547862 HYPKQ9NX55 129 aa26.43■■□□□ 1.82
SSH1-207ENST00000547862 RASSF10A6NK89 507 aa26.42■■□□□ 1.82
SSH1-207ENST00000547862 ELL2O00472 640 aaPredicted RBP26.42■■□□□ 1.82
SSH1-207ENST00000547862 KIAA2012Q0VF49 1180 aa26.42■■□□□ 1.82
SSH1-207ENST00000547862 THSD7BQ9C0I4 1608 aa26.41■■□□□ 1.82
SSH1-207ENST00000547862 RIC3Q7Z5B4 369 aa26.41■■□□□ 1.82
SSH1-207ENST00000547862 CELF1Q92879 486 aaKnown RBP26.41■■□□□ 1.82
SSH1-207ENST00000547862 GOLGA2Q08379 1002 aa26.4■■□□□ 1.82
SSH1-207ENST00000547862 WDR33Q9C0J8 1336 aaKnown RBP26.39■■□□□ 1.82
SSH1-207ENST00000547862 SPEF2Q9C093 1822 aa26.39■■□□□ 1.82
SSH1-207ENST00000547862 PHAXQ9H814 394 aaKnown RBP26.39■■□□□ 1.82
SSH1-207ENST00000547862 YDJCA8MPS7 323 aa26.38■■□□□ 1.81
SSH1-207ENST00000547862 IRS4O14654 1257 aaPredicted RBP26.38■■□□□ 1.81
SSH1-207ENST00000547862 TMC4Q7Z404 712 aa26.38■■□□□ 1.81
SSH1-207ENST00000547862 IFT57Q9NWB7 429 aa26.38■■□□□ 1.81
SSH1-207ENST00000547862 SHTN1A0MZ66 631 aa26.37■■□□□ 1.81
SSH1-207ENST00000547862 RIMBP2O15034 1052 aa26.37■■□□□ 1.81
SSH1-207ENST00000547862 CTCFP49711 727 aaPredicted RBP26.37■■□□□ 1.81
SSH1-207ENST00000547862 TNIP1Q15025 636 aa26.37■■□□□ 1.81
SSH1-207ENST00000547862 MYD88Q99836 296 aa26.37■■□□□ 1.81
SSH1-207ENST00000547862 DBNDD1Q9H9R9 158 aa26.37■■□□□ 1.81
SSH1-207ENST00000547862 NSFL1CQ9UNZ2 370 aaKnown RBP26.37■■□□□ 1.81
SSH1-207ENST00000547862 C6orf229H3BNL8 230 aa26.36■■□□□ 1.81
SSH1-207ENST00000547862 ZNF853P0CG23 659 aa26.36■■□□□ 1.81
SSH1-207ENST00000547862 GNAI1P63096 354 aa26.36■■□□□ 1.81
SSH1-207ENST00000547862 TRPM4Q8TD43 1214 aa26.36■■□□□ 1.81
SSH1-207ENST00000547862 GPR101Q96P66 508 aaPredicted RBP26.36■■□□□ 1.81
SSH1-207ENST00000547862 GLIS2Q9BZE0 524 aaPredicted RBP26.36■■□□□ 1.81
SSH1-207ENST00000547862 LBX1P52954 281 aa26.35■■□□□ 1.81
SSH1-207ENST00000547862 CALD1Q05682 793 aaKnown RBP26.35■■□□□ 1.81
SSH1-207ENST00000547862 SF3B3Q15393 1217 aaKnown RBP26.35■■□□□ 1.81
SSH1-207ENST00000547862 CYP4F22Q6NT55 531 aa26.35■■□□□ 1.81
SSH1-207ENST00000547862 ZNF408Q9H9D4 720 aa26.35■■□□□ 1.81
SSH1-207ENST00000547862 GPSM2P81274 684 aa26.34■■□□□ 1.81
SSH1-207ENST00000547862 WASHC4Q2M389 1173 aa26.34■■□□□ 1.81
SSH1-207ENST00000547862 CAPNS2Q96L46 248 aa26.34■■□□□ 1.81
SSH1-207ENST00000547862 WBP1LQ9NX94 342 aa26.34■■□□□ 1.81
SSH1-207ENST00000547862 CDHR2Q9BYE9 1310 aa26.34■■□□□ 1.81
SSH1-207ENST00000547862 CST9Q5W186 159 aa26.33■■□□□ 1.81
SSH1-207ENST00000547862 JARID2Q92833 1246 aaPredicted RBP26.33■■□□□ 1.81
SSH1-207ENST00000547862 ZBTB12Q9Y330 459 aaPredicted RBP26.33■■□□□ 1.81
SSH1-207ENST00000547862 SCN9AQ15858 1988 aa26.33■■□□□ 1.8
SSH1-207ENST00000547862 MYH3P11055 1940 aa26.32■■□□□ 1.8
SSH1-207ENST00000547862 CELF2O95319 508 aaKnown RBP26.32■■□□□ 1.8
SSH1-207ENST00000547862 MICALL2Q8IY33 904 aa26.32■■□□□ 1.8
SSH1-207ENST00000547862 C8orf58Q8NAV2 365 aa26.32■■□□□ 1.8
SSH1-207ENST00000547862 CCDC85AQ96PX6 553 aaPredicted RBP26.32■■□□□ 1.8
SSH1-207ENST00000547862 PRDM10Q9NQV6 1147 aa26.32■■□□□ 1.8
SSH1-207ENST00000547862 PSMD14O00487 310 aa26.31■■□□□ 1.8
SSH1-207ENST00000547862 DOK7Q18PE1 504 aa26.31■■□□□ 1.8
SSH1-207ENST00000547862 SEC31BQ9NQW1 1179 aa26.31■■□□□ 1.8
SSH1-207ENST00000547862 POLLQ9UGP5 575 aa26.31■■□□□ 1.8
SSH1-207ENST00000547862 CNOT7Q9UIV1 285 aaKnown RBP26.31■■□□□ 1.8
SSH1-207ENST00000547862 ECE2O60344 883 aa26.3■■□□□ 1.8
SSH1-207ENST00000547862 HSPA8P11142 646 aaKnown RBP26.3■■□□□ 1.8
SSH1-207ENST00000547862 ECE1P42892 770 aa26.3■■□□□ 1.8
SSH1-207ENST00000547862 HIRAP54198 1017 aaPredicted RBP26.3■■□□□ 1.8
SSH1-207ENST00000547862 ZBTB38Q8NAP3 1195 aaPredicted RBP26.3■■□□□ 1.8
SSH1-207ENST00000547862 TLL2Q9Y6L7 1015 aa26.3■■□□□ 1.8
SSH1-207ENST00000547862 POLR2AP24928 1970 aaKnown RBP26.29■■□□□ 1.8
SSH1-207ENST00000547862 H7C1D1 291 aa26.29■■□□□ 1.8
SSH1-207ENST00000547862 MAP2K1Q02750 393 aaPredicted RBP26.29■■□□□ 1.8
SSH1-207ENST00000547862 TRIM28Q13263 835 aaKnown RBP26.29■■□□□ 1.8
SSH1-207ENST00000547862 RPS8P62241 208 aaKnown RBP26.28■■□□□ 1.8
SSH1-207ENST00000547862 EYA3Q99504 573 aa26.28■■□□□ 1.8
SSH1-207ENST00000547862 AOC2O75106 756 aa26.27■■□□□ 1.8
SSH1-207ENST00000547862 UFL1O94874 794 aa26.27■■□□□ 1.8
SSH1-207ENST00000547862 TBC1D10BQ4KMP7 808 aaPredicted RBP26.27■■□□□ 1.8
SSH1-207ENST00000547862 SAMD7Q7Z3H4 446 aa26.27■■□□□ 1.8
SSH1-207ENST00000547862 TSR2Q969E8 191 aaKnown RBP26.27■■□□□ 1.8
SSH1-207ENST00000547862 CWC25Q9NXE8 425 aaPredicted RBP26.27■■□□□ 1.8
SSH1-207ENST00000547862 PSME4Q14997 1843 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms