RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	RBCK1	Q9BYM8	510 aa		9.46	□□□□□ -0.9
LEMD3-205	ENST00000544506	NEURL1B	A8MQ27	555 aa		9.45	□□□□□ -0.9
LEMD3-205	ENST00000544506	ADH6	P28332	368 aa		9.45	□□□□□ -0.9
LEMD3-205	ENST00000544506	MARS	P56192	900 aa	Known RBP	9.45	□□□□□ -0.9
LEMD3-205	ENST00000544506	EHHADH	Q08426	723 aa		9.45	□□□□□ -0.9
LEMD3-205	ENST00000544506	PDE12	Q6L8Q7	609 aa	Known RBP	9.45	□□□□□ -0.9
LEMD3-205	ENST00000544506	ZNF438	Q7Z4V0	828 aa		9.45	□□□□□ -0.9
LEMD3-205	ENST00000544506	FAM129B	Q96TA1	746 aa		9.45	□□□□□ -0.9
LEMD3-205	ENST00000544506	TMEM63C	Q9P1W3	806 aa		9.45	□□□□□ -0.9
LEMD3-205	ENST00000544506	GGA1	Q9UJY5	639 aa		9.45	□□□□□ -0.9
LEMD3-205	ENST00000544506	SIN3B	O75182	1162 aa		9.44	□□□□□ -0.9
LEMD3-205	ENST00000544506	XKR5	Q6UX68	686 aa		9.44	□□□□□ -0.9
LEMD3-205	ENST00000544506	FCHSD1	Q86WN1	690 aa		9.44	□□□□□ -0.9
LEMD3-205	ENST00000544506	GOLGA6L1	Q8N7Z2	621 aa		9.44	□□□□□ -0.9
LEMD3-205	ENST00000544506	CITED4	Q96RK1	184 aa		9.44	□□□□□ -0.9
LEMD3-205	ENST00000544506	ELP3	Q9H9T3	547 aa		9.44	□□□□□ -0.9
LEMD3-205	ENST00000544506	GDF2	Q9UK05	429 aa	Predicted RBP	9.44	□□□□□ -0.9
LEMD3-205	ENST00000544506	GPR182	O15218	404 aa		9.43	□□□□□ -0.9
LEMD3-205	ENST00000544506	MMP20	O60882	483 aa		9.43	□□□□□ -0.9
LEMD3-205	ENST00000544506	SLCO4C1	Q6ZQN7	724 aa		9.43	□□□□□ -0.9
LEMD3-205	ENST00000544506	TMC7	Q7Z402	723 aa		9.43	□□□□□ -0.9
LEMD3-205	ENST00000544506	TMC1	Q8TDI8	760 aa		9.43	□□□□□ -0.9
LEMD3-205	ENST00000544506	MAP3K6	O95382	1288 aa		9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	IGHA2	P01877	340 aa		9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	PDE3B	Q13370	1112 aa		9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	CCDC27	Q2M243	656 aa		9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	TMCO4	Q5TGY1	634 aa		9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	LYPD4	Q6UWN0	246 aa		9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	DHX32	Q7L7V1	743 aa	Known RBP	9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	WHAMM	Q8TF30	809 aa		9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	TNFRSF25	Q93038	417 aa		9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	UBE2O	Q9C0C9	1292 aa	Known RBP	9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	ABI2	Q9NYB9	513 aa	Predicted RBP	9.42	□□□□□ -0.9
LEMD3-205	ENST00000544506	TBC1D8B	Q0IIM8	1120 aa		9.41	□□□□□ -0.9
LEMD3-205	ENST00000544506	C1orf229	Q6ZS94	237 aa	Predicted RBP	9.41	□□□□□ -0.9
LEMD3-205	ENST00000544506	IGFLR1	Q9H665	355 aa		9.41	□□□□□ -0.9
LEMD3-205	ENST00000544506	TLR7	Q9NYK1	1049 aa	Known RBP	9.41	□□□□□ -0.9
LEMD3-205	ENST00000544506	FOXD3	Q9UJU5	478 aa	Predicted RBP	9.41	□□□□□ -0.9
LEMD3-205	ENST00000544506	TNFRSF21	O75509	655 aa		9.4	□□□□□ -0.9
LEMD3-205	ENST00000544506	CELA2B	P08218	269 aa	Predicted RBP	9.4	□□□□□ -0.9
LEMD3-205	ENST00000544506	TTC39B	Q5VTQ0	682 aa	Predicted RBP	9.4	□□□□□ -0.9
LEMD3-205	ENST00000544506	DMRTB1	Q96MA1	342 aa		9.4	□□□□□ -0.9
LEMD3-205	ENST00000544506	ASB16	Q96NS5	453 aa		9.4	□□□□□ -0.9
LEMD3-205	ENST00000544506	MDFI	Q99750	246 aa		9.4	□□□□□ -0.9
LEMD3-205	ENST00000544506	PSAP	P07602	524 aa		9.39	□□□□□ -0.91
LEMD3-205	ENST00000544506	BCR	P11274	1271 aa		9.39	□□□□□ -0.91
LEMD3-205	ENST00000544506	ZNF385C	Q66K41	422 aa	Predicted RBP	9.39	□□□□□ -0.91
LEMD3-205	ENST00000544506	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	9.39	□□□□□ -0.91
LEMD3-205	ENST00000544506	OR13H1	Q8NG92	308 aa		9.39	□□□□□ -0.91
LEMD3-205	ENST00000544506	SNX29	Q8TEQ0	813 aa		9.39	□□□□□ -0.91
LEMD3-205	ENST00000544506	DNAJB12	Q9NXW2	375 aa	Known RBP	9.39	□□□□□ -0.91
LEMD3-205	ENST00000544506	CNTN3	Q9P232	1028 aa		9.39	□□□□□ -0.91
LEMD3-205	ENST00000544506	ADARB2-AS1	A8MUL3	147 aa		9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	OIP5	O43482	229 aa		9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	CYP2E1	P05181	493 aa	Predicted RBP	9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	EPX	P11678	715 aa		9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	LOR	P23490	312 aa	Predicted RBP	9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	SOX18	P35713	384 aa		9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	ADH7	P40394	386 aa		9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	PLAUR	Q03405	335 aa		9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	C1orf127	Q8N9H9	656 aa		9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	NIF3L1	Q9GZT8	377 aa		9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	CHRD	Q9H2X0	955 aa		9.38	□□□□□ -0.91
LEMD3-205	ENST00000544506	ELOA3C	A0A087WX78	387 aa	Predicted RBP	9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	ELOA3D	A6NLF2	546 aa	Predicted RBP	9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	ZBTB42	B2RXF5	422 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	PHACTR2	O75167	634 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	NRL	P54845	237 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	GPLD1	P80108	840 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	MLLT1	Q03111	559 aa	Predicted RBP	9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	ELOA3B	Q3SY89	546 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	SVOP	Q8N4V2	548 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	GALNT6	Q8NCL4	622 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	ELOA3	Q8NG57	546 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	TRPM4	Q8TD43	1214 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	EDARADD	Q8WWZ3	215 aa		9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	ALKBH8	Q96BT7	664 aa	Known RBP	9.37	□□□□□ -0.91
LEMD3-205	ENST00000544506	PHF20L1	A8MW92	1017 aa		9.36	□□□□□ -0.91
LEMD3-205	ENST00000544506	SHISA8	B8ZZ34	492 aa		9.36	□□□□□ -0.91
LEMD3-205	ENST00000544506	TREH	O43280	583 aa		9.36	□□□□□ -0.91
LEMD3-205	ENST00000544506	HOXD8	P13378	290 aa	Predicted RBP	9.36	□□□□□ -0.91
LEMD3-205	ENST00000544506	ORC1	Q13415	861 aa		9.36	□□□□□ -0.91
LEMD3-205	ENST00000544506	NSUN5	Q96P11	429 aa	Known RBP	9.36	□□□□□ -0.91
LEMD3-205	ENST00000544506	LRRC4B	Q9NT99	713 aa		9.36	□□□□□ -0.91
LEMD3-205	ENST00000544506	KANSL3	Q9P2N6	904 aa		9.36	□□□□□ -0.91
LEMD3-205	ENST00000544506	SLC6A14	Q9UN76	642 aa		9.36	□□□□□ -0.91
LEMD3-205	ENST00000544506	MFAP1	P55081	439 aa	Known RBP	9.35	□□□□□ -0.91
LEMD3-205	ENST00000544506	MAP3K10	Q02779	954 aa		9.35	□□□□□ -0.91
LEMD3-205	ENST00000544506	DSC3	Q14574	896 aa		9.35	□□□□□ -0.91
LEMD3-205	ENST00000544506	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.35	□□□□□ -0.91
LEMD3-205	ENST00000544506	ZSCAN1	Q8NBB4	408 aa		9.35	□□□□□ -0.91
LEMD3-205	ENST00000544506	NAGPA	Q9UK23	515 aa		9.35	□□□□□ -0.91
LEMD3-205	ENST00000544506	ANKRD33B	A6NCL7	494 aa		9.34	□□□□□ -0.91
LEMD3-205	ENST00000544506	EREG	O14944	169 aa		9.34	□□□□□ -0.91
LEMD3-205	ENST00000544506	CES1	P23141	567 aa		9.34	□□□□□ -0.91
LEMD3-205	ENST00000544506	PCSK7	Q16549	785 aa		9.34	□□□□□ -0.91
LEMD3-205	ENST00000544506	HFE2	Q6ZVN8	426 aa		9.34	□□□□□ -0.91
LEMD3-205	ENST00000544506	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	9.34	□□□□□ -0.91
LEMD3-205	ENST00000544506	NEFL	P07196	543 aa		9.33	□□□□□ -0.92

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