RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 KCNA6P17658 529 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 TCERG1LQ5VWI1 586 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 CHST3Q7LGC8 479 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 ZBTB43O43298 467 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 KIF5CO60282 957 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 HCLS1P14317 486 aaPredicted RBP14.77□□□□□ -0.05
CHD4-211ENST00000544484 NMIQ13287 307 aaPredicted RBP14.77□□□□□ -0.05
CHD4-211ENST00000544484 CNPY2Q9Y2B0 182 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 HLA-DOAP06340 250 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 ZSCAN22P10073 491 aaPredicted RBP14.77□□□□□ -0.05
CHD4-211ENST00000544484 IL15P40933 162 aaPredicted RBP14.77□□□□□ -0.05
CHD4-211ENST00000544484 UBE2HP62256 183 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 Q6ZUG5 572 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 LINS1Q8NG48 757 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 NLRP3Q96P20 1036 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 CABP5Q9NP86 173 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 A0A1W2PP64 1363 aa14.77□□□□□ -0.05
CHD4-211ENST00000544484 ST5P78524 1137 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 CALML4Q96GE6 196 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 STX1AQ16623 288 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 JAKMIP3Q5VZ66 844 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 CEP85Q6P2H3 762 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 KIF18AQ8NI77 898 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 SBNO2Q9Y2G9 1366 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 NPATQ14207 1427 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 IL2RBP14784 551 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 DZIP3Q86Y13 1208 aaKnown RBP14.76□□□□□ -0.05
CHD4-211ENST00000544484 CCDC12Q8WUD4 166 aaPredicted RBP14.76□□□□□ -0.05
CHD4-211ENST00000544484 ALG1Q9BT22 464 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.76□□□□□ -0.05
CHD4-211ENST00000544484 HSP90AA4PQ58FG1 418 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 PDCL2Q8N4E4 241 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 CCDC102BQ68D86 513 aa14.76□□□□□ -0.05
CHD4-211ENST00000544484 NUP160Q12769 1436 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 ZFYP08048 801 aaPredicted RBP14.75□□□□□ -0.05
CHD4-211ENST00000544484 TSPY3P0CV98 308 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 TSPY8P0CW00 308 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 CASQ1P31415 396 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 PPP4R3AQ6IN85 833 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 TNNT1P13805 278 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 MAP3K19Q56UN5 1328 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 WDR7Q9Y4E6 1490 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 POTEJP0CG39 1038 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 PICALMQ13492 652 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 IFIT1BQ5T764 474 aaKnown RBP14.75□□□□□ -0.05
CHD4-211ENST00000544484 PAG1Q9NWQ8 432 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 SAMM50Q9Y512 469 aa14.75□□□□□ -0.05
CHD4-211ENST00000544484 NAA16Q6N069 864 aaPredicted RBP14.75□□□□□ -0.05
CHD4-211ENST00000544484 CCDC40Q4G0X9 1142 aa14.74□□□□□ -0.05
CHD4-211ENST00000544484 FGFR1OPO95684 399 aaKnown RBP14.74□□□□□ -0.05
CHD4-211ENST00000544484 ITSN2Q9NZM3 1697 aa14.74□□□□□ -0.05
CHD4-211ENST00000544484 AFMP43652 599 aa14.74□□□□□ -0.05
CHD4-211ENST00000544484 ZSCAN23Q3MJ62 389 aa14.74□□□□□ -0.05
CHD4-211ENST00000544484 HOXC9P31274 260 aa14.74□□□□□ -0.05
CHD4-211ENST00000544484 ESR2Q92731 530 aa14.74□□□□□ -0.05
CHD4-211ENST00000544484 NEBLO76041 1014 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 TFCP2Q12800 502 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 KLHL40Q2TBA0 621 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 TMCO3Q6UWJ1 677 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 VPS36Q86VN1 386 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 MIGA1Q8NAN2 632 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 UTP14AQ9BVJ6 771 aaKnown RBP14.73□□□□□ -0.05
CHD4-211ENST00000544484 C19orf44Q9H6X5 657 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 JAG2Q9Y219 1238 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 ABCC1P33527 1531 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 MACROD2A1Z1Q3 448 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 YEATS4O95619 227 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 DESP17661 470 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 MARCKSP29966 332 aaPredicted RBP14.73□□□□□ -0.05
CHD4-211ENST00000544484 USP8P40818 1118 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 C8orf34Q49A92 452 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 KRT23Q9C075 422 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 ZSCAN16Q9H4T2 348 aaPredicted RBP14.73□□□□□ -0.05
CHD4-211ENST00000544484 KIAA0754O94854 1291 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 SYKP43405 635 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 RTN1Q16799 776 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 G2E3Q7L622 706 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 DCTPP1Q9H773 170 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 KIF2AO00139 706 aaPredicted RBP14.73□□□□□ -0.05
CHD4-211ENST00000544484 RBM25P49756 843 aaKnown RBP14.73□□□□□ -0.05
CHD4-211ENST00000544484 PAXIP1Q6ZW49 1069 aaPredicted RBP14.73□□□□□ -0.05
CHD4-211ENST00000544484 CRACR2AQ9BSW2 395 aa14.73□□□□□ -0.05
CHD4-211ENST00000544484 CCDC178Q5BJE1 867 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 ERICH4A6NGS2 130 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 AMPD3Q01432 767 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 USP48Q86UV5 1035 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 IRS4O14654 1257 aaPredicted RBP14.72□□□□□ -0.05
CHD4-211ENST00000544484 ZBTB40Q9NUA8 1239 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 KIF20AO95235 890 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 DNM1Q05193 864 aaKnown RBP14.72□□□□□ -0.05
CHD4-211ENST00000544484 PRC1O43663 620 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 TOM1O60784 492 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 GSTO1P78417 241 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 HEATR3Q7Z4Q2 680 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 EHMT1Q9H9B1 1298 aa14.72□□□□□ -0.05
CHD4-211ENST00000544484 BICC1Q9H694 974 aaKnown RBP14.71□□□□□ -0.05
CHD4-211ENST00000544484 LUZP1Q86V48 1076 aa14.71□□□□□ -0.05
CHD4-211ENST00000544484 TEX14Q8IWB6 1497 aa14.71□□□□□ -0.05
CHD4-211ENST00000544484 RNMTO43148 476 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms