RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 DDX54Q8TDD1 881 aaKnown RBP22.25■■□□□ 1.15
COPS7A-215ENST00000543155 TPCN1Q9ULQ1 816 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 MTMR6Q9Y217 621 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 SHANK3Q9BYB0 1731 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 NBPF26B4DH59 902 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 ERVV-2B6SEH9 535 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 RPS6KB1P23443 525 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 CSPP1Q1MSJ5 1256 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 TSGA10IPQ3SY00 556 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 NBPF14Q5TI25 921 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 NBPF10Q6P3W6 841 aaKnown RBP22.25■■□□□ 1.15
COPS7A-215ENST00000543155 BRINP3Q76B58 766 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 NBPF15Q8N660 670 aa22.25■■□□□ 1.15
COPS7A-215ENST00000543155 ABCA3Q99758 1704 aa22.24■■□□□ 1.15
COPS7A-215ENST00000543155 COL5A2P05997 1499 aaPredicted RBP22.24■■□□□ 1.15
COPS7A-215ENST00000543155 TAF5LO75529 589 aa22.24■■□□□ 1.15
COPS7A-215ENST00000543155 PDIA4P13667 645 aaKnown RBP22.24■■□□□ 1.15
COPS7A-215ENST00000543155 UBE2HP62256 183 aa22.24■■□□□ 1.15
COPS7A-215ENST00000543155 EDC3Q96F86 508 aaKnown RBP22.24■■□□□ 1.15
COPS7A-215ENST00000543155 PRDM11Q9NQV5 511 aa22.24■■□□□ 1.15
COPS7A-215ENST00000543155 H7C1W4 665 aa22.24■■□□□ 1.15
COPS7A-215ENST00000543155 TOM1L2Q6ZVM7 507 aa22.24■■□□□ 1.15
COPS7A-215ENST00000543155 FOXO4P98177 505 aa22.23■■□□□ 1.15
COPS7A-215ENST00000543155 CCDC183Q5T5S1 534 aa22.23■■□□□ 1.15
COPS7A-215ENST00000543155 USPL1Q5W0Q7 1092 aa22.23■■□□□ 1.15
COPS7A-215ENST00000543155 LMBR1LQ6UX01 489 aa22.23■■□□□ 1.15
COPS7A-215ENST00000543155 HAUS7Q99871 368 aa22.23■■□□□ 1.15
COPS7A-215ENST00000543155 DBNDD2Q9BQY9 259 aa22.23■■□□□ 1.15
COPS7A-215ENST00000543155 NECAB1Q8N987 351 aa22.22■■□□□ 1.15
COPS7A-215ENST00000543155 CWC25Q9NXE8 425 aaPredicted RBP22.22■■□□□ 1.15
COPS7A-215ENST00000543155 KRT32Q14532 448 aa22.22■■□□□ 1.15
COPS7A-215ENST00000543155 ZNF609O15014 1411 aa22.21■■□□□ 1.15
COPS7A-215ENST00000543155 LETM1O95202 739 aaPredicted RBP22.21■■□□□ 1.15
COPS7A-215ENST00000543155 NKX1-1Q15270 411 aaPredicted RBP22.21■■□□□ 1.15
COPS7A-215ENST00000543155 DNAJC2Q99543 621 aaKnown RBP22.21■■□□□ 1.15
COPS7A-215ENST00000543155 MSNP26038 577 aaKnown RBP22.21■■□□□ 1.15
COPS7A-215ENST00000543155 FIBPO43427 364 aa22.2■■□□□ 1.14
COPS7A-215ENST00000543155 TTLL7Q6ZT98 887 aa22.2■■□□□ 1.14
COPS7A-215ENST00000543155 NAP1L5Q96NT1 182 aaPredicted RBP22.2■■□□□ 1.14
COPS7A-215ENST00000543155 CHMP3Q9Y3E7 222 aa22.2■■□□□ 1.14
COPS7A-215ENST00000543155 TNS2Q63HR2 1409 aa22.2■■□□□ 1.14
COPS7A-215ENST00000543155 VPS37CA5D8V6 355 aaPredicted RBP22.19■■□□□ 1.14
COPS7A-215ENST00000543155 RNF214Q8ND24 703 aa22.19■■□□□ 1.14
COPS7A-215ENST00000543155 GPR108Q9NPR9 543 aa22.19■■□□□ 1.14
COPS7A-215ENST00000543155 TAF6LQ9Y6J9 622 aa22.19■■□□□ 1.14
COPS7A-215ENST00000543155 U3KPZ7 1027 aaPredicted RBP22.19■■□□□ 1.14
COPS7A-215ENST00000543155 PDCP20941 246 aa22.19■■□□□ 1.14
COPS7A-215ENST00000543155 TOB2Q14106 344 aaPredicted RBP22.19■■□□□ 1.14
COPS7A-215ENST00000543155 PALLDQ8WX93 1383 aa22.18■■□□□ 1.14
COPS7A-215ENST00000543155 IL2RBP14784 551 aa22.18■■□□□ 1.14
COPS7A-215ENST00000543155 COL9A3Q14050 684 aaPredicted RBP22.18■■□□□ 1.14
COPS7A-215ENST00000543155 KLHL34Q8N239 644 aa22.18■■□□□ 1.14
COPS7A-215ENST00000543155 SOS2Q07890 1332 aaPredicted RBP22.18■■□□□ 1.14
COPS7A-215ENST00000543155 SH3TC1Q8TE82 1336 aa22.18■■□□□ 1.14
COPS7A-215ENST00000543155 DNM1Q05193 864 aaKnown RBP22.18■■□□□ 1.14
COPS7A-215ENST00000543155 MCMDC2Q4G0Z9 681 aa22.18■■□□□ 1.14
COPS7A-215ENST00000543155 LARP1BQ659C4 914 aaKnown RBP22.18■■□□□ 1.14
COPS7A-215ENST00000543155 ATG9AQ7Z3C6 839 aa22.18■■□□□ 1.14
COPS7A-215ENST00000543155 FAM184AQ8NB25 1140 aa22.18■■□□□ 1.14
COPS7A-215ENST00000543155 CCDC191Q8NCU4 936 aa22.18■■□□□ 1.14
COPS7A-215ENST00000543155 KBTBD3Q8NAB2 608 aa22.17■■□□□ 1.14
COPS7A-215ENST00000543155 CARD10Q9BWT7 1032 aa22.17■■□□□ 1.14
COPS7A-215ENST00000543155 NDUFB9Q9Y6M9 179 aa22.17■■□□□ 1.14
COPS7A-215ENST00000543155 SPEF2Q9C093 1822 aa22.17■■□□□ 1.14
COPS7A-215ENST00000543155 A1BGP04217 495 aa22.16■■□□□ 1.14
COPS7A-215ENST00000543155 IL15P40933 162 aaPredicted RBP22.16■■□□□ 1.14
COPS7A-215ENST00000543155 TICAM2Q86XR7 235 aa22.16■■□□□ 1.14
COPS7A-215ENST00000543155 TCEANC2Q96MN5 208 aa22.16■■□□□ 1.14
COPS7A-215ENST00000543155 NOL7Q9UMY1 257 aaKnown RBP22.16■■□□□ 1.14
COPS7A-215ENST00000543155 TOGARAM1Q9Y4F4 1720 aa22.16■■□□□ 1.14
COPS7A-215ENST00000543155 HSPA2P54652 639 aa22.16■■□□□ 1.14
COPS7A-215ENST00000543155 DDX46Q7L014 1031 aaKnown RBP22.16■■□□□ 1.14
COPS7A-215ENST00000543155 NEK1Q96PY6 1258 aa22.15■■□□□ 1.14
COPS7A-215ENST00000543155 CCDC39Q9UFE4 941 aa22.15■■□□□ 1.14
COPS7A-215ENST00000543155 UVSSAQ2YD98 709 aa22.15■■□□□ 1.14
COPS7A-215ENST00000543155 ZBTB3Q9H5J0 574 aa22.15■■□□□ 1.14
COPS7A-215ENST00000543155 DTNBO60941 627 aa22.14■■□□□ 1.13
COPS7A-215ENST00000543155 CCDC129Q6ZRS4 1044 aa22.14■■□□□ 1.13
COPS7A-215ENST00000543155 NEUROD6Q96NK8 337 aa22.13■■□□□ 1.13
COPS7A-215ENST00000543155 SEC62Q99442 399 aaKnown RBP22.13■■□□□ 1.13
COPS7A-215ENST00000543155 ATG3Q9NT62 314 aa22.13■■□□□ 1.13
COPS7A-215ENST00000543155 PAG1Q9NWQ8 432 aa22.13■■□□□ 1.13
COPS7A-215ENST00000543155 LAMA4Q16363 1823 aa22.13■■□□□ 1.13
COPS7A-215ENST00000543155 EYA2O00167 538 aa22.13■■□□□ 1.13
COPS7A-215ENST00000543155 CIAO1O76071 339 aa22.13■■□□□ 1.13
COPS7A-215ENST00000543155 CDC37L1Q7L3B6 337 aa22.13■■□□□ 1.13
COPS7A-215ENST00000543155 HELLSQ9NRZ9 838 aa22.13■■□□□ 1.13
COPS7A-215ENST00000543155 KRT85P78386 507 aa22.12■■□□□ 1.13
COPS7A-215ENST00000543155 GOLIM4O00461 696 aa22.11■■□□□ 1.13
COPS7A-215ENST00000543155 CHGBP05060 677 aa22.11■■□□□ 1.13
COPS7A-215ENST00000543155 CYP21A2P08686 494 aa22.11■■□□□ 1.13
COPS7A-215ENST00000543155 MCM5P33992 734 aa22.11■■□□□ 1.13
COPS7A-215ENST00000543155 GTF3C6Q969F1 213 aa22.11■■□□□ 1.13
COPS7A-215ENST00000543155 ELP1O95163 1332 aa22.11■■□□□ 1.13
COPS7A-215ENST00000543155 TPRNQ4KMQ1 711 aa22.1■■□□□ 1.13
COPS7A-215ENST00000543155 SLAIN2Q9P270 581 aa22.1■■□□□ 1.13
COPS7A-215ENST00000543155 ZKSCAN5Q9Y2L8 839 aa22.1■■□□□ 1.13
COPS7A-215ENST00000543155 CCDC9Q9Y3X0 531 aaKnown RBP22.1■■□□□ 1.13
COPS7A-215ENST00000543155 STK3Q13188 491 aa22.1■■□□□ 1.13
COPS7A-215ENST00000543155 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms