RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 DDX46Q7L014 1031 aaKnown RBP21.56■■□□□ 1.04
RABGGTA-203ENST00000543002 FTSJ3Q8IY81 847 aaKnown RBP21.56■■□□□ 1.04
RABGGTA-203ENST00000543002 TMEM57Q8N5G2 664 aa21.56■■□□□ 1.04
RABGGTA-203ENST00000543002 TTLL11Q8NHH1 800 aa21.56■■□□□ 1.04
RABGGTA-203ENST00000543002 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
RABGGTA-203ENST00000543002 PLIN1O60240 522 aa21.55■■□□□ 1.04
RABGGTA-203ENST00000543002 GRIN3BO60391 1043 aa21.55■■□□□ 1.04
RABGGTA-203ENST00000543002 CSF1RP07333 972 aa21.55■■□□□ 1.04
RABGGTA-203ENST00000543002 RLBP1P12271 317 aa21.55■■□□□ 1.04
RABGGTA-203ENST00000543002 FOXO4P98177 505 aa21.55■■□□□ 1.04
RABGGTA-203ENST00000543002 SUCLG2Q96I99 432 aa21.55■■□□□ 1.04
RABGGTA-203ENST00000543002 SLX4Q8IY92 1834 aa21.54■■□□□ 1.04
RABGGTA-203ENST00000543002 ARFGEF1Q9Y6D6 1849 aa21.54■■□□□ 1.04
RABGGTA-203ENST00000543002 GRAPQ13588 217 aa21.54■■□□□ 1.04
RABGGTA-203ENST00000543002 EPHA10Q5JZY3 1008 aa21.54■■□□□ 1.04
RABGGTA-203ENST00000543002 GRAPLQ8TC17 118 aaPredicted RBP21.54■■□□□ 1.04
RABGGTA-203ENST00000543002 MYH3P11055 1940 aa21.53■■□□□ 1.04
RABGGTA-203ENST00000543002 C7orf43Q8WVR3 580 aa21.53■■□□□ 1.04
RABGGTA-203ENST00000543002 KAZALD1Q96I82 304 aa21.53■■□□□ 1.04
RABGGTA-203ENST00000543002 CCDC85AQ96PX6 553 aaPredicted RBP21.53■■□□□ 1.04
RABGGTA-203ENST00000543002 RTL9Q8NET4 1388 aa21.52■■□□□ 1.04
RABGGTA-203ENST00000543002 C21orf2O43822 256 aa21.52■■□□□ 1.03
RABGGTA-203ENST00000543002 BBOX1O75936 387 aa21.52■■□□□ 1.03
RABGGTA-203ENST00000543002 UBTFL1P0CB47 393 aaPredicted RBP21.52■■□□□ 1.03
RABGGTA-203ENST00000543002 PANK1Q8TE04 598 aa21.52■■□□□ 1.03
RABGGTA-203ENST00000543002 MEIS3Q99687 375 aa21.52■■□□□ 1.03
RABGGTA-203ENST00000543002 GREM2Q9H772 168 aa21.52■■□□□ 1.03
RABGGTA-203ENST00000543002 SEC31BQ9NQW1 1179 aa21.52■■□□□ 1.03
RABGGTA-203ENST00000543002 CACNA1SQ13698 1873 aa21.51■■□□□ 1.03
RABGGTA-203ENST00000543002 PPEF1O14829 653 aaPredicted RBP21.51■■□□□ 1.03
RABGGTA-203ENST00000543002 GNAI3P08754 354 aa21.51■■□□□ 1.03
RABGGTA-203ENST00000543002 ZNF219Q9P2Y4 722 aaPredicted RBP21.51■■□□□ 1.03
RABGGTA-203ENST00000543002 HDAC5Q9UQL6 1122 aa21.51■■□□□ 1.03
RABGGTA-203ENST00000543002 PDE3AQ14432 1141 aa21.5■■□□□ 1.03
RABGGTA-203ENST00000543002 SOGA3Q5TF21 947 aa21.5■■□□□ 1.03
RABGGTA-203ENST00000543002 LMBR1LQ6UX01 489 aa21.5■■□□□ 1.03
RABGGTA-203ENST00000543002 ITPRIPQ8IWB1 547 aa21.5■■□□□ 1.03
RABGGTA-203ENST00000543002 CELF1Q92879 486 aaKnown RBP21.5■■□□□ 1.03
RABGGTA-203ENST00000543002 RPS8P62241 208 aaKnown RBP21.49■■□□□ 1.03
RABGGTA-203ENST00000543002 FAM161AQ3B820 660 aa21.49■■□□□ 1.03
RABGGTA-203ENST00000543002 RABL6Q3YEC7 729 aaPredicted RBP21.49■■□□□ 1.03
RABGGTA-203ENST00000543002 TMC4Q7Z404 712 aa21.49■■□□□ 1.03
RABGGTA-203ENST00000543002 CDC5LQ99459 802 aaKnown RBP21.49■■□□□ 1.03
RABGGTA-203ENST00000543002 BICC1Q9H694 974 aaKnown RBP21.49■■□□□ 1.03
RABGGTA-203ENST00000543002 TAF1P21675 1872 aa21.48■■□□□ 1.03
RABGGTA-203ENST00000543002 ITGA6P23229 1130 aa21.48■■□□□ 1.03
RABGGTA-203ENST00000543002 CC2D2BQ6DHV5 1058 aa21.48■■□□□ 1.03
RABGGTA-203ENST00000543002 ARHGAP27Q6ZUM4 889 aa21.48■■□□□ 1.03
RABGGTA-203ENST00000543002 ANKRD44Q8N8A2 993 aa21.48■■□□□ 1.03
RABGGTA-203ENST00000543002 ATP6V0A2Q9Y487 856 aa21.48■■□□□ 1.03
RABGGTA-203ENST00000543002 RRP1P56182 461 aaKnown RBP21.47■■□□□ 1.03
RABGGTA-203ENST00000543002 CCDC93Q567U6 631 aa21.47■■□□□ 1.03
RABGGTA-203ENST00000543002 SP8Q8IXZ3 490 aa21.47■■□□□ 1.03
RABGGTA-203ENST00000543002 CHMP3Q9Y3E7 222 aa21.47■■□□□ 1.03
RABGGTA-203ENST00000543002 GOLGB1Q14789 3259 aaKnown RBP21.47■■□□□ 1.03
RABGGTA-203ENST00000543002 COL4A1P02462 1669 aa21.46■■□□□ 1.03
RABGGTA-203ENST00000543002 ANKRD18BA2A2Z9 1011 aa21.46■■□□□ 1.03
RABGGTA-203ENST00000543002 ZBTB7BO15156 539 aaPredicted RBP21.46■■□□□ 1.03
RABGGTA-203ENST00000543002 MVPQ14764 893 aaKnown RBP21.46■■□□□ 1.03
RABGGTA-203ENST00000543002 OLFM4Q6UX06 510 aa21.46■■□□□ 1.03
RABGGTA-203ENST00000543002 ANKRD18AQ8IVF6 992 aa21.46■■□□□ 1.03
RABGGTA-203ENST00000543002 LRRFIP2Q9Y608 721 aaKnown RBP21.46■■□□□ 1.03
RABGGTA-203ENST00000543002 IFIT5Q13325 482 aaKnown RBP21.45■■□□□ 1.02
RABGGTA-203ENST00000543002 CCDC57Q2TAC2 916 aa21.45■■□□□ 1.02
RABGGTA-203ENST00000543002 C20orf194Q5TEA3 1177 aa21.45■■□□□ 1.02
RABGGTA-203ENST00000543002 TMX4Q9H1E5 349 aaPredicted RBP21.45■■□□□ 1.02
RABGGTA-203ENST00000543002 COG6Q9Y2V7 657 aa21.45■■□□□ 1.02
RABGGTA-203ENST00000543002 GRIPAP1Q4V328 841 aa21.44■■□□□ 1.02
RABGGTA-203ENST00000543002 SLC51AQ86UW1 340 aa21.44■■□□□ 1.02
RABGGTA-203ENST00000543002 RTKN2Q8IZC4 609 aa21.44■■□□□ 1.02
RABGGTA-203ENST00000543002 NFKBIEO00221 500 aa21.43■■□□□ 1.02
RABGGTA-203ENST00000543002 GNAI2P04899 355 aa21.43■■□□□ 1.02
RABGGTA-203ENST00000543002 SNED1Q8TER0 1413 aa21.43■■□□□ 1.02
RABGGTA-203ENST00000543002 DDX19BQ9UMR2 479 aa21.43■■□□□ 1.02
RABGGTA-203ENST00000543002 IGHMBP2P38935 993 aaKnown RBP21.42■■□□□ 1.02
RABGGTA-203ENST00000543002 BSDC1Q9NW68 430 aaPredicted RBP21.42■■□□□ 1.02
RABGGTA-203ENST00000543002 LTBP3Q9NS15 1303 aa21.42■■□□□ 1.02
RABGGTA-203ENST00000543002 FER1L6Q2WGJ9 1857 aa21.42■■□□□ 1.02
RABGGTA-203ENST00000543002 TAOK3Q9H2K8 898 aa21.41■■□□□ 1.02
RABGGTA-203ENST00000543002 LRRC37AA6NMS7 1700 aa21.41■■□□□ 1.02
RABGGTA-203ENST00000543002 FKBP4Q02790 459 aaKnown RBP eCLIP21.4■■□□□ 1.02
RABGGTA-203ENST00000543002 RASSF7Q02833 373 aa21.4■■□□□ 1.02
RABGGTA-203ENST00000543002 MPHOSPH8Q99549 860 aa21.4■■□□□ 1.02
RABGGTA-203ENST00000543002 MTX1Q13505 466 aa21.39■■□□□ 1.01
RABGGTA-203ENST00000543002 TAF7LQ5H9L4 462 aa21.39■■□□□ 1.01
RABGGTA-203ENST00000543002 MPNDQ8N594 471 aa21.39■■□□□ 1.01
RABGGTA-203ENST00000543002 ZNF594Q96JF6 807 aaPredicted RBP21.39■■□□□ 1.01
RABGGTA-203ENST00000543002 PSMD1Q99460 953 aa21.39■■□□□ 1.01
RABGGTA-203ENST00000543002 CHMP4BQ9H444 224 aaKnown RBP21.39■■□□□ 1.01
RABGGTA-203ENST00000543002 DPP8Q6V1X1 898 aaPredicted RBP21.38■■□□□ 1.01
RABGGTA-203ENST00000543002 RFX5P48382 616 aaPredicted RBP21.37■■□□□ 1.01
RABGGTA-203ENST00000543002 GPSM2P81274 684 aa21.37■■□□□ 1.01
RABGGTA-203ENST00000543002 RTFDC1Q9BY42 306 aaPredicted RBP21.37■■□□□ 1.01
RABGGTA-203ENST00000543002 MINPP1Q9UNW1 487 aa21.37■■□□□ 1.01
RABGGTA-203ENST00000543002 NSFL1CQ9UNZ2 370 aaKnown RBP21.37■■□□□ 1.01
RABGGTA-203ENST00000543002 SUPT16HQ9Y5B9 1047 aaKnown RBP21.37■■□□□ 1.01
RABGGTA-203ENST00000543002 LMNB1P20700 586 aa21.36■■□□□ 1.01
RABGGTA-203ENST00000543002 PRELPP51888 382 aa21.36■■□□□ 1.01
RABGGTA-203ENST00000543002 LDHAL6AQ6ZMR3 332 aa21.36■■□□□ 1.01
RABGGTA-203ENST00000543002 C1orf115Q9H7X2 142 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms