RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-222	ENST00000542777	TAF1	P21675	1872 aa		20.88	■□□□□ 0.93
DDX11-222	ENST00000542777	CXCL9	Q07325	125 aa		20.87	■□□□□ 0.93
DDX11-222	ENST00000542777	DEFB115	Q30KQ5	88 aa		20.87	■□□□□ 0.93
DDX11-222	ENST00000542777	ISCA1	Q9BUE6	129 aa		20.87	■□□□□ 0.93
DDX11-222	ENST00000542777	MBIP	Q9NS73	344 aa		20.87	■□□□□ 0.93
DDX11-222	ENST00000542777	HYPK	Q9NX55	129 aa		20.87	■□□□□ 0.93
DDX11-222	ENST00000542777	ATP5J2-PTCD1	G3V325	749 aa		20.86	■□□□□ 0.93
DDX11-222	ENST00000542777	CAPN15	O75808	1086 aa		20.86	■□□□□ 0.93
DDX11-222	ENST00000542777	RASSF10	A6NK89	507 aa		20.85	■□□□□ 0.93
DDX11-222	ENST00000542777	FOXN1	O15353	648 aa		20.85	■□□□□ 0.93
DDX11-222	ENST00000542777	KIAA2012	Q0VF49	1180 aa		20.85	■□□□□ 0.93
DDX11-222	ENST00000542777	TMC4	Q7Z404	712 aa		20.85	■□□□□ 0.93
DDX11-222	ENST00000542777	FAM89A	Q96GI7	184 aa		20.85	■□□□□ 0.93
DDX11-222	ENST00000542777	GPRC5D	Q9NZD1	345 aa		20.85	■□□□□ 0.93
DDX11-222	ENST00000542777	DDX60	Q8IY21	1712 aa	Known RBP	20.84	■□□□□ 0.93
DDX11-222	ENST00000542777	APAF1	O14727	1248 aa		20.84	■□□□□ 0.93
DDX11-222	ENST00000542777	ZNF853	P0CG23	659 aa		20.84	■□□□□ 0.93
DDX11-222	ENST00000542777	CIAPIN1	Q6FI81	312 aa		20.84	■□□□□ 0.93
DDX11-222	ENST00000542777	ADARB2	Q9NS39	739 aa	Known RBP	20.84	■□□□□ 0.93
DDX11-222	ENST00000542777	ABT1	Q9ULW3	272 aa	Known RBP	20.84	■□□□□ 0.93
DDX11-222	ENST00000542777	GMPS	P49915	693 aa	Predicted RBP	20.83	■□□□□ 0.93
DDX11-222	ENST00000542777	FMR1	Q06787	632 aa	Known RBP eCLIP	20.83	■□□□□ 0.93
DDX11-222	ENST00000542777	SF3B3	Q15393	1217 aa	Known RBP	20.83	■□□□□ 0.93
DDX11-222	ENST00000542777	AIDA	Q96BJ3	306 aa		20.83	■□□□□ 0.93
DDX11-222	ENST00000542777	TRIM28	Q13263	835 aa	Known RBP	20.82	■□□□□ 0.92
DDX11-222	ENST00000542777	RTL5	Q5HYW3	569 aa	Predicted RBP	20.82	■□□□□ 0.92
DDX11-222	ENST00000542777	IFT57	Q9NWB7	429 aa		20.82	■□□□□ 0.92
DDX11-222	ENST00000542777	ELL2	O00472	640 aa	Predicted RBP	20.81	■□□□□ 0.92
DDX11-222	ENST00000542777	RAD17	O75943	681 aa		20.81	■□□□□ 0.92
DDX11-222	ENST00000542777	GNAI1	P63096	354 aa		20.81	■□□□□ 0.92
DDX11-222	ENST00000542777	TNIP1	Q15025	636 aa		20.81	■□□□□ 0.92
DDX11-222	ENST00000542777	RIC3	Q7Z5B4	369 aa		20.81	■□□□□ 0.92
DDX11-222	ENST00000542777	CELF1	Q92879	486 aa	Known RBP	20.81	■□□□□ 0.92
DDX11-222	ENST00000542777	BCL2L13	Q9BXK5	485 aa		20.81	■□□□□ 0.92
DDX11-222	ENST00000542777	WDR33	Q9C0J8	1336 aa	Known RBP	20.8	■□□□□ 0.92
DDX11-222	ENST00000542777	TRPM7	Q96QT4	1865 aa		20.8	■□□□□ 0.92
DDX11-222	ENST00000542777	TRAF5	O00463	557 aa		20.8	■□□□□ 0.92
DDX11-222	ENST00000542777	CTCF	P49711	727 aa	Predicted RBP	20.8	■□□□□ 0.92
DDX11-222	ENST00000542777	CALD1	Q05682	793 aa	Known RBP	20.8	■□□□□ 0.92
DDX11-222	ENST00000542777	PHAX	Q9H814	394 aa	Known RBP	20.8	■□□□□ 0.92
DDX11-222	ENST00000542777	WBP1L	Q9NX94	342 aa		20.8	■□□□□ 0.92
DDX11-222	ENST00000542777	NSFL1C	Q9UNZ2	370 aa	Known RBP	20.8	■□□□□ 0.92
DDX11-222	ENST00000542777	LRRC37A	A6NMS7	1700 aa		20.79	■□□□□ 0.92
DDX11-222	ENST00000542777	YDJC	A8MPS7	323 aa		20.79	■□□□□ 0.92
DDX11-222	ENST00000542777	IRS4	O14654	1257 aa	Predicted RBP	20.79	■□□□□ 0.92
DDX11-222	ENST00000542777	GOLGA2	Q08379	1002 aa		20.79	■□□□□ 0.92
DDX11-222	ENST00000542777	PRDM10	Q9NQV6	1147 aa		20.79	■□□□□ 0.92
DDX11-222	ENST00000542777	CDHR2	Q9BYE9	1310 aa		20.78	■□□□□ 0.92
DDX11-222	ENST00000542777	DUOX1	Q9NRD9	1551 aa		20.78	■□□□□ 0.92
DDX11-222	ENST00000542777	WASHC4	Q2M389	1173 aa		20.78	■□□□□ 0.92
DDX11-222	ENST00000542777	CST9	Q5W186	159 aa		20.78	■□□□□ 0.92
DDX11-222	ENST00000542777	C6orf229	H3BNL8	230 aa		20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	RIMBP2	O15034	1052 aa		20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	GPSM2	P81274	684 aa		20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	MAP2K1	Q02750	393 aa	Predicted RBP	20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	C8orf58	Q8NAV2	365 aa		20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	MYD88	Q99836	296 aa		20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	PGAP2	Q9UHJ9	254 aa		20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	CNOT7	Q9UIV1	285 aa	Known RBP	20.76	■□□□□ 0.91
DDX11-222	ENST00000542777	COL4A1	P02462	1669 aa		20.75	■□□□□ 0.91
DDX11-222	ENST00000542777	HIRA	P54198	1017 aa	Predicted RBP	20.75	■□□□□ 0.91
DDX11-222	ENST00000542777	RPS8	P62241	208 aa	Known RBP	20.75	■□□□□ 0.91
DDX11-222	ENST00000542777	CAPNS2	Q96L46	248 aa		20.75	■□□□□ 0.91
DDX11-222	ENST00000542777	GLIS2	Q9BZE0	524 aa	Predicted RBP	20.75	■□□□□ 0.91
DDX11-222	ENST00000542777	DBNDD1	Q9H9R9	158 aa		20.75	■□□□□ 0.91
DDX11-222	ENST00000542777	POLL	Q9UGP5	575 aa		20.75	■□□□□ 0.91
DDX11-222	ENST00000542777	TLL2	Q9Y6L7	1015 aa		20.75	■□□□□ 0.91
DDX11-222	ENST00000542777		H7C1D1	291 aa		20.74	■□□□□ 0.91
DDX11-222	ENST00000542777	HSP90B1	P14625	803 aa	Known RBP	20.74	■□□□□ 0.91
DDX11-222	ENST00000542777	ECE1	P42892	770 aa		20.74	■□□□□ 0.91
DDX11-222	ENST00000542777	LBX1	P52954	281 aa		20.74	■□□□□ 0.91
DDX11-222	ENST00000542777	CYP4F22	Q6NT55	531 aa		20.74	■□□□□ 0.91
DDX11-222	ENST00000542777	TRPM4	Q8TD43	1214 aa		20.74	■□□□□ 0.91
DDX11-222	ENST00000542777	ZC3H15	Q8WU90	426 aa	Known RBP	20.74	■□□□□ 0.91
DDX11-222	ENST00000542777	SHTN1	A0MZ66	631 aa		20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	PSMD14	O00487	310 aa		20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	CELF2	O95319	508 aa	Known RBP	20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	GRM1	Q13255	1194 aa		20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	MICALL2	Q8IY33	904 aa		20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	CCDC191	Q8NCU4	936 aa		20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	EYA3	Q99504	573 aa		20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	CHMP4A	Q9BY43	222 aa		20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	SEC31B	Q9NQW1	1179 aa		20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	ZBTB12	Q9Y330	459 aa	Predicted RBP	20.73	■□□□□ 0.91
DDX11-222	ENST00000542777	PCCA	P05165	728 aa	Predicted RBP	20.72	■□□□□ 0.91
DDX11-222	ENST00000542777	CCDC30	Q5VVM6	783 aa		20.72	■□□□□ 0.91
DDX11-222	ENST00000542777	DPF2	Q92785	391 aa		20.72	■□□□□ 0.91
DDX11-222	ENST00000542777	GPR101	Q96P66	508 aa	Predicted RBP	20.72	■□□□□ 0.91
DDX11-222	ENST00000542777	ECE2	O60344	883 aa		20.71	■□□□□ 0.91
DDX11-222	ENST00000542777	DDX58	O95786	925 aa	Known RBP	20.71	■□□□□ 0.91
DDX11-222	ENST00000542777	HSPA8	P11142	646 aa	Known RBP	20.71	■□□□□ 0.91
DDX11-222	ENST00000542777	DOK7	Q18PE1	504 aa		20.71	■□□□□ 0.91
DDX11-222	ENST00000542777	CDC37L1	Q7L3B6	337 aa		20.71	■□□□□ 0.91
DDX11-222	ENST00000542777	TBC1D16	Q8TBP0	767 aa		20.71	■□□□□ 0.91
DDX11-222	ENST00000542777	JARID2	Q92833	1246 aa	Predicted RBP	20.71	■□□□□ 0.91
DDX11-222	ENST00000542777	METTL22	Q9BUU2	404 aa	Predicted RBP	20.71	■□□□□ 0.91
DDX11-222	ENST00000542777	CWC25	Q9NXE8	425 aa	Predicted RBP	20.71	■□□□□ 0.91
DDX11-222	ENST00000542777	PDE8A	O60658	829 aa		20.7	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms