RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PHF14O94880 888 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 PRIM1P49642 420 aaKnown RBP7.84□□□□□ -1.15
PTPRO-208ENST00000542557 ADCK5Q3MIX3 580 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 UBE3BQ7Z3V4 1068 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 KLHDC4Q8TBB5 520 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 ZCRB1Q8TBF4 217 aaKnown RBP7.84□□□□□ -1.15
PTPRO-208ENST00000542557 CHAMP1Q96JM3 812 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 BOLA2Q9H3K6 86 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 DBNLQ9UJU6 430 aaKnown RBP7.84□□□□□ -1.15
PTPRO-208ENST00000542557 NSFL1CQ9UNZ2 370 aaKnown RBP7.84□□□□□ -1.15
PTPRO-208ENST00000542557 A0A087WZG4 1122 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 H7C1W4 665 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 SYT1P21579 422 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 ANKRD1Q15327 319 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 HS1BP3Q53T59 392 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 PDLIM2Q96JY6 352 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 RBSNQ9H1K0 784 aa7.84□□□□□ -1.15
PTPRO-208ENST00000542557 SPEF2Q9C093 1822 aa7.84□□□□□ -1.16
PTPRO-208ENST00000542557 LARGE1O95461 756 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 F13A1P00488 732 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 KCNJ4P48050 445 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 USPL1Q5W0Q7 1092 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 GPR108Q9NPR9 543 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 PRDM11Q9NQV5 511 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 TOGARAM1Q9Y4F4 1720 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 SYCE3A1L190 88 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 NBPF26B4DH59 902 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 TFCP2Q12800 502 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 TAF7LQ5H9L4 462 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 NBPF14Q5TI25 921 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 NBPF10Q6P3W6 841 aaKnown RBP7.83□□□□□ -1.16
PTPRO-208ENST00000542557 NBPF15Q8N660 670 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 CARD10Q9BWT7 1032 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 NHSL1Q5SYE7 1610 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 PALLDQ8WX93 1383 aa7.83□□□□□ -1.16
PTPRO-208ENST00000542557 STRCQ7RTU9 1775 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 CPA1P15085 419 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 GJB2P29033 226 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 ST3GAL1Q11201 340 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 KRT32Q14532 448 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 CSPP1Q1MSJ5 1256 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 USP48Q86UV5 1035 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 CCDC83Q8IWF9 413 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 HAUS7Q99871 368 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 CWC25Q9NXE8 425 aaPredicted RBP7.82□□□□□ -1.16
PTPRO-208ENST00000542557 ATP5J2-PTCD1G3V325 749 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 PTCD1O75127 700 aaKnown RBP7.82□□□□□ -1.16
PTPRO-208ENST00000542557 TAF5LO75529 589 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 RPS6KB1P23443 525 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 PIP4K2AP48426 406 aaPredicted RBP7.82□□□□□ -1.16
PTPRO-208ENST00000542557 FOXO4P98177 505 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 BLOC1S2Q6QNY1 142 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 TOM1L2Q6ZVM7 507 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 ATG3Q9NT62 314 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 MTMR6Q9Y217 621 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 SH3TC1Q8TE82 1336 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 TCHHQ07283 1943 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 ZNF609O15014 1411 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 ATXN8OSP0DMR3 200 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 IL2RBP14784 551 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 UBE2HP62256 183 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 ME3Q16798 604 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 ZNF589Q86UQ0 364 aaPredicted RBP7.82□□□□□ -1.16
PTPRO-208ENST00000542557 CCDC191Q8NCU4 936 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 TPCN1Q9ULQ1 816 aa7.82□□□□□ -1.16
PTPRO-208ENST00000542557 GADD45BO75293 160 aaPredicted RBP7.81□□□□□ -1.16
PTPRO-208ENST00000542557 LMBR1LQ6UX01 489 aa7.81□□□□□ -1.16
PTPRO-208ENST00000542557 ZSCAN30Q86W11 494 aa7.81□□□□□ -1.16
PTPRO-208ENST00000542557 DBNDD2Q9BQY9 259 aa7.81□□□□□ -1.16
PTPRO-208ENST00000542557 TSPY26PQ9H489 355 aa7.81□□□□□ -1.16
PTPRO-208ENST00000542557 U3KPZ7 1027 aaPredicted RBP7.81□□□□□ -1.16
PTPRO-208ENST00000542557 CIAO1O76071 339 aa7.81□□□□□ -1.16
PTPRO-208ENST00000542557 LETM1O95202 739 aaPredicted RBP7.81□□□□□ -1.16
PTPRO-208ENST00000542557 PDCP20941 246 aa7.81□□□□□ -1.16
PTPRO-208ENST00000542557 IL15P40933 162 aaPredicted RBP7.81□□□□□ -1.16
PTPRO-208ENST00000542557 CCDC183Q5T5S1 534 aa7.81□□□□□ -1.16
PTPRO-208ENST00000542557 CNPY2Q9Y2B0 182 aa7.81□□□□□ -1.16
PTPRO-208ENST00000542557 TTLL7Q6ZT98 887 aa7.8□□□□□ -1.16
PTPRO-208ENST00000542557 ATG9AQ7Z3C6 839 aa7.8□□□□□ -1.16
PTPRO-208ENST00000542557 KBTBD3Q8NAB2 608 aa7.8□□□□□ -1.16
PTPRO-208ENST00000542557 FAM184AQ8NB25 1140 aa7.8□□□□□ -1.16
PTPRO-208ENST00000542557 JARID2Q92833 1246 aaPredicted RBP7.8□□□□□ -1.16
PTPRO-208ENST00000542557 LARP6Q9BRS8 491 aaKnown RBP7.8□□□□□ -1.16
PTPRO-208ENST00000542557 GDPD2Q9HCC8 539 aa7.8□□□□□ -1.16
PTPRO-208ENST00000542557 MCMDC2Q4G0Z9 681 aa7.8□□□□□ -1.16
PTPRO-208ENST00000542557 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.8□□□□□ -1.16
PTPRO-208ENST00000542557 EDC3Q96F86 508 aaKnown RBP7.8□□□□□ -1.16
PTPRO-208ENST00000542557 LRP6O75581 1613 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 HSPA2P54652 639 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 PDE4CQ08493 712 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 TOB2Q14106 344 aaPredicted RBP7.79□□□□□ -1.16
PTPRO-208ENST00000542557 ISCA1Q9BUE6 129 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 SLAIN2Q9P270 581 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 PLCH1Q4KWH8 1693 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 EYA2O00167 538 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 A1BGP04217 495 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 TRIM28Q13263 835 aaKnown RBP7.79□□□□□ -1.16
PTPRO-208ENST00000542557 DNAJC2Q99543 621 aaKnown RBP7.79□□□□□ -1.16
PTPRO-208ENST00000542557 ZMYND15Q9H091 742 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 HELLSQ9NRZ9 838 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms