RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 KLK14Q9P0G3 267 aa8.16□□□□□ -1.1
PRKDC-210ENST00000541488 ANKIB1Q9P2G1 1089 aa8.16□□□□□ -1.1
PRKDC-210ENST00000541488 ZMIZ1Q9ULJ6 1067 aa8.16□□□□□ -1.1
PRKDC-210ENST00000541488 TYRO3Q06418 890 aa8.15□□□□□ -1.1
PRKDC-210ENST00000541488 C20orf204Q6ZNR8 217 aa8.15□□□□□ -1.1
PRKDC-210ENST00000541488 VTI1AQ96AJ9 217 aa8.15□□□□□ -1.1
PRKDC-210ENST00000541488 GPC6Q9Y625 555 aaPredicted RBP8.15□□□□□ -1.1
PRKDC-210ENST00000541488 SSTR4P31391 388 aa8.14□□□□□ -1.11
PRKDC-210ENST00000541488 ADH7P40394 386 aa8.14□□□□□ -1.11
PRKDC-210ENST00000541488 BTLAQ7Z6A9 289 aa8.14□□□□□ -1.11
PRKDC-210ENST00000541488 STAG2Q8N3U4 1231 aa8.14□□□□□ -1.11
PRKDC-210ENST00000541488 USP21Q9UK80 565 aa8.14□□□□□ -1.11
PRKDC-210ENST00000541488 WEE1P30291 646 aa8.13□□□□□ -1.11
PRKDC-210ENST00000541488 TBC1D8BQ0IIM8 1120 aa8.13□□□□□ -1.11
PRKDC-210ENST00000541488 SPEM2Q0P670 501 aa8.13□□□□□ -1.11
PRKDC-210ENST00000541488 DGKZQ13574 1117 aa8.13□□□□□ -1.11
PRKDC-210ENST00000541488 BCS1LQ9Y276 419 aa8.13□□□□□ -1.11
PRKDC-210ENST00000541488 RAC1P63000 192 aa8.12□□□□□ -1.11
PRKDC-210ENST00000541488 RTN1Q16799 776 aa8.12□□□□□ -1.11
PRKDC-210ENST00000541488 C14orf37Q86TY3 774 aa8.12□□□□□ -1.11
PRKDC-210ENST00000541488 BHMTQ93088 406 aa8.12□□□□□ -1.11
PRKDC-210ENST00000541488 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
PRKDC-210ENST00000541488 QTRT2Q9H974 415 aaKnown RBP8.12□□□□□ -1.11
PRKDC-210ENST00000541488 KCNH4Q9UQ05 1017 aa8.12□□□□□ -1.11
PRKDC-210ENST00000541488 FKBP5Q13451 457 aaPredicted RBP8.11□□□□□ -1.11
PRKDC-210ENST00000541488 MKNK1Q9BUB5 465 aa8.11□□□□□ -1.11
PRKDC-210ENST00000541488 OAS3Q9Y6K5 1087 aaKnown RBP8.11□□□□□ -1.11
PRKDC-210ENST00000541488 LILRB5O75023 590 aa8.1□□□□□ -1.11
PRKDC-210ENST00000541488 SRPK2P78362 688 aaKnown RBP8.1□□□□□ -1.11
PRKDC-210ENST00000541488 CCDC82Q8N4S0 544 aa8.1□□□□□ -1.11
PRKDC-210ENST00000541488 ACIN1Q9UKV3 1341 aaKnown RBP8.09□□□□□ -1.11
PRKDC-210ENST00000541488 FOXO3O43524 673 aa8.09□□□□□ -1.11
PRKDC-210ENST00000541488 CD97P48960 835 aa8.09□□□□□ -1.11
PRKDC-210ENST00000541488 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
PRKDC-210ENST00000541488 SERPINA10Q9UK55 444 aa8.09□□□□□ -1.11
PRKDC-210ENST00000541488 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
PRKDC-210ENST00000541488 TGFBR3LH3BV60 316 aa8.08□□□□□ -1.12
PRKDC-210ENST00000541488 IDH3AP50213 366 aa8.08□□□□□ -1.12
PRKDC-210ENST00000541488 HIF1AQ16665 826 aa8.08□□□□□ -1.12
PRKDC-210ENST00000541488 CAPN12Q6ZSI9 719 aa8.08□□□□□ -1.12
PRKDC-210ENST00000541488 KRT25Q7Z3Z0 450 aa8.08□□□□□ -1.12
PRKDC-210ENST00000541488 PBXIP1Q96AQ6 731 aa8.08□□□□□ -1.12
PRKDC-210ENST00000541488 LRFN2Q9ULH4 789 aa8.08□□□□□ -1.12
PRKDC-210ENST00000541488 JAG1P78504 1218 aa8.07□□□□□ -1.12
PRKDC-210ENST00000541488 FAM69CQ0P6D2 419 aa8.07□□□□□ -1.12
PRKDC-210ENST00000541488 NEUROD1Q13562 356 aa8.07□□□□□ -1.12
PRKDC-210ENST00000541488 FMR1NBQ8N0W7 255 aaPredicted RBP8.07□□□□□ -1.12
PRKDC-210ENST00000541488 UBE2OQ9C0C9 1292 aaKnown RBP8.07□□□□□ -1.12
PRKDC-210ENST00000541488 ATG7O95352 703 aa8.06□□□□□ -1.12
PRKDC-210ENST00000541488 ELOAQ14241 798 aaKnown RBP8.06□□□□□ -1.12
PRKDC-210ENST00000541488 NAA30Q147X3 362 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-210ENST00000541488 SWI5Q1ZZU3 235 aa8.06□□□□□ -1.12
PRKDC-210ENST00000541488 PRR23CQ6ZRP0 262 aa8.06□□□□□ -1.12
PRKDC-210ENST00000541488 WFDC12Q8WWY7 111 aa8.06□□□□□ -1.12
PRKDC-210ENST00000541488 PNMA5Q96PV4 448 aa8.06□□□□□ -1.12
PRKDC-210ENST00000541488 SAP130Q9H0E3 1048 aa8.06□□□□□ -1.12
PRKDC-210ENST00000541488 C1orf115Q9H7X2 142 aa8.06□□□□□ -1.12
PRKDC-210ENST00000541488 DMGDHQ9UI17 866 aaKnown RBP8.06□□□□□ -1.12
PRKDC-210ENST00000541488 MICAL2O94851 1124 aa8.05□□□□□ -1.12
PRKDC-210ENST00000541488 GRNP28799 593 aaKnown RBP8.05□□□□□ -1.12
PRKDC-210ENST00000541488 IREB2P48200 963 aaKnown RBP8.05□□□□□ -1.12
PRKDC-210ENST00000541488 GP2P55259 537 aaKnown RBP8.05□□□□□ -1.12
PRKDC-210ENST00000541488 KCNQ4P56696 695 aa8.05□□□□□ -1.12
PRKDC-210ENST00000541488 OCLNQ16625 522 aa8.05□□□□□ -1.12
PRKDC-210ENST00000541488 C11orf91Q3C1V1 193 aa8.05□□□□□ -1.12
PRKDC-210ENST00000541488 COX20Q5RI15 118 aa8.05□□□□□ -1.12
PRKDC-210ENST00000541488 NFKB1P19838 968 aa8.04□□□□□ -1.12
PRKDC-210ENST00000541488 FSTP19883 344 aa8.04□□□□□ -1.12
PRKDC-210ENST00000541488 NOS3P29474 1203 aa8.04□□□□□ -1.12
PRKDC-210ENST00000541488 IER5Q5VY09 327 aa8.04□□□□□ -1.12
PRKDC-210ENST00000541488 IFT43Q96FT9 208 aa8.04□□□□□ -1.12
PRKDC-210ENST00000541488 MEGF10Q96KG7 1140 aa8.04□□□□□ -1.12
PRKDC-210ENST00000541488 KRTAP4-11Q9BYQ6 195 aa8.04□□□□□ -1.12
PRKDC-210ENST00000541488 INPP5BP32019 993 aa8.03□□□□□ -1.12
PRKDC-210ENST00000541488 TREML1Q86YW5 311 aa8.03□□□□□ -1.12
PRKDC-210ENST00000541488 RGL4Q8IZJ4 473 aa8.03□□□□□ -1.12
PRKDC-210ENST00000541488 GSX2Q9BZM3 304 aa8.03□□□□□ -1.12
PRKDC-210ENST00000541488 JPH1Q9HDC5 661 aaPredicted RBP8.03□□□□□ -1.12
PRKDC-210ENST00000541488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.03□□□□□ -1.12
PRKDC-210ENST00000541488 CXXC1Q9P0U4 656 aaPredicted RBP8.03□□□□□ -1.12
PRKDC-210ENST00000541488 SLAIN2Q9P270 581 aa8.03□□□□□ -1.12
PRKDC-210ENST00000541488 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
PRKDC-210ENST00000541488 MED26O95402 600 aa8.02□□□□□ -1.13
PRKDC-210ENST00000541488 EPB42P16452 691 aa8.02□□□□□ -1.13
PRKDC-210ENST00000541488 ARSDP51689 593 aa8.02□□□□□ -1.13
PRKDC-210ENST00000541488 CCINQ13939 588 aa8.02□□□□□ -1.13
PRKDC-210ENST00000541488 CMTR1Q8N1G2 835 aaKnown RBP8.02□□□□□ -1.13
PRKDC-210ENST00000541488 NUDT8Q8WV74 236 aa8.02□□□□□ -1.13
PRKDC-210ENST00000541488 MYO19Q96H55 970 aa8.02□□□□□ -1.13
PRKDC-210ENST00000541488 SASH3O75995 380 aa8.01□□□□□ -1.13
PRKDC-210ENST00000541488 TARSP26639 723 aaKnown RBP8.01□□□□□ -1.13
PRKDC-210ENST00000541488 SCNN1AP37088 669 aa8.01□□□□□ -1.13
PRKDC-210ENST00000541488 FAM26DQ5JW98 314 aa8.01□□□□□ -1.13
PRKDC-210ENST00000541488 DMRTC2Q8IXT2 367 aaPredicted RBP8.01□□□□□ -1.13
PRKDC-210ENST00000541488 CARNS1A5YM72 827 aa8□□□□□ -1.13
PRKDC-210ENST00000541488 KIAA1324LA8MWY0 1029 aaPredicted RBP8□□□□□ -1.13
PRKDC-210ENST00000541488 OPLAHO14841 1288 aa8□□□□□ -1.13
PRKDC-210ENST00000541488 MLLT1Q03111 559 aaPredicted RBP8□□□□□ -1.13
PRKDC-210ENST00000541488 C16orf46Q6P387 395 aa8□□□□□ -1.13
PRKDC-210ENST00000541488 DNAJB12Q9NXW2 375 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms