RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 CCDC85CA6NKD9 419 aa16.07■□□□□ 0.16
SNHG1-216ENST00000541416 H7C1D1 291 aa16.07■□□□□ 0.16
SNHG1-216ENST00000541416 FMR1Q06787 632 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNHG1-216ENST00000541416 CDC37L1Q7L3B6 337 aa16.07■□□□□ 0.16
SNHG1-216ENST00000541416 TRMT112Q9UI30 125 aaKnown RBP16.07■□□□□ 0.16
SNHG1-216ENST00000541416 SH3TC1Q8TE82 1336 aa16.06■□□□□ 0.16
SNHG1-216ENST00000541416 BRPF1P55201 1214 aaPredicted RBP16.06■□□□□ 0.16
SNHG1-216ENST00000541416 RIPK4P57078 832 aa16.06■□□□□ 0.16
SNHG1-216ENST00000541416 MLLT1Q03111 559 aaPredicted RBP16.06■□□□□ 0.16
SNHG1-216ENST00000541416 GRAPQ13588 217 aa16.06■□□□□ 0.16
SNHG1-216ENST00000541416 FAM161AQ3B820 660 aa16.06■□□□□ 0.16
SNHG1-216ENST00000541416 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
SNHG1-216ENST00000541416 PGAP2Q9UHJ9 254 aa16.06■□□□□ 0.16
SNHG1-216ENST00000541416 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
SNHG1-216ENST00000541416 AOC2O75106 756 aa16.05■□□□□ 0.16
SNHG1-216ENST00000541416 RAD17O75943 681 aa16.05■□□□□ 0.16
SNHG1-216ENST00000541416 COPS6Q7L5N1 327 aa16.05■□□□□ 0.16
SNHG1-216ENST00000541416 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
SNHG1-216ENST00000541416 GLIS2Q9BZE0 524 aaPredicted RBP16.05■□□□□ 0.16
SNHG1-216ENST00000541416 ZNF408Q9H9D4 720 aa16.05■□□□□ 0.16
SNHG1-216ENST00000541416 HCLS1P14317 486 aaPredicted RBP16.04■□□□□ 0.16
SNHG1-216ENST00000541416 AIMP1Q12904 312 aaKnown RBP16.04■□□□□ 0.16
SNHG1-216ENST00000541416 NOGQ13253 232 aa16.04■□□□□ 0.16
SNHG1-216ENST00000541416 TCIRG1Q13488 830 aa16.04■□□□□ 0.16
SNHG1-216ENST00000541416 PDIA6Q15084 440 aa16.04■□□□□ 0.16
SNHG1-216ENST00000541416 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
SNHG1-216ENST00000541416 CNOT7Q9UIV1 285 aaKnown RBP16.04■□□□□ 0.16
SNHG1-216ENST00000541416 XAGE3Q8WTP9 111 aa16.03■□□□□ 0.16
SNHG1-216ENST00000541416 ANXA1P04083 346 aa16.02■□□□□ 0.16
SNHG1-216ENST00000541416 PROSER3Q2NL68 480 aa16.02■□□□□ 0.16
SNHG1-216ENST00000541416 SLC51AQ86UW1 340 aa16.02■□□□□ 0.16
SNHG1-216ENST00000541416 DPF2Q92785 391 aa16.02■□□□□ 0.16
SNHG1-216ENST00000541416 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
SNHG1-216ENST00000541416 TSKSQ9UJT2 592 aa16.02■□□□□ 0.16
SNHG1-216ENST00000541416 LAMB2P55268 1798 aa16.02■□□□□ 0.15
SNHG1-216ENST00000541416 RGS19P49795 217 aa16.01■□□□□ 0.15
SNHG1-216ENST00000541416 WASHC4Q2M389 1173 aa16.01■□□□□ 0.15
SNHG1-216ENST00000541416 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
SNHG1-216ENST00000541416 NECTIN2Q92692 538 aa16.01■□□□□ 0.15
SNHG1-216ENST00000541416 RPS12P25398 132 aaKnown RBP16■□□□□ 0.15
SNHG1-216ENST00000541416 HUNKP57058 714 aa16■□□□□ 0.15
SNHG1-216ENST00000541416 TRPM4Q8TD43 1214 aa16■□□□□ 0.15
SNHG1-216ENST00000541416 EYA3Q99504 573 aa16■□□□□ 0.15
SNHG1-216ENST00000541416 NSFL1CQ9UNZ2 370 aaKnown RBP16■□□□□ 0.15
SNHG1-216ENST00000541416 C6orf229H3BNL8 230 aa15.99■□□□□ 0.15
SNHG1-216ENST00000541416 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
SNHG1-216ENST00000541416 TMPOP42166 694 aaKnown RBP15.99■□□□□ 0.15
SNHG1-216ENST00000541416 HIRAP54198 1017 aaPredicted RBP15.99■□□□□ 0.15
SNHG1-216ENST00000541416 USP48Q86UV5 1035 aa15.99■□□□□ 0.15
SNHG1-216ENST00000541416 C2orf69Q8N8R5 385 aa15.99■□□□□ 0.15
SNHG1-216ENST00000541416 DCPSQ96C86 337 aaKnown RBP15.99■□□□□ 0.15
SNHG1-216ENST00000541416 MCOLN1Q9GZU1 580 aa15.99■□□□□ 0.15
SNHG1-216ENST00000541416 YDJCA8MPS7 323 aa15.98■□□□□ 0.15
SNHG1-216ENST00000541416 SLC34A2O95436 690 aa15.98■□□□□ 0.15
SNHG1-216ENST00000541416 DGKZQ13574 1117 aa15.98■□□□□ 0.15
SNHG1-216ENST00000541416 RALBP1Q15311 655 aa15.98■□□□□ 0.15
SNHG1-216ENST00000541416 ANKRD13DQ6ZTN6 518 aa15.98■□□□□ 0.15
SNHG1-216ENST00000541416 KRT26Q7Z3Y9 468 aa15.98■□□□□ 0.15
SNHG1-216ENST00000541416 PLBD2Q8NHP8 589 aa15.98■□□□□ 0.15
SNHG1-216ENST00000541416 CCDC102AQ96A19 550 aa15.98■□□□□ 0.15
SNHG1-216ENST00000541416 DBF4Q9UBU7 674 aaPredicted RBP15.98■□□□□ 0.15
SNHG1-216ENST00000541416 LRRC37AA6NMS7 1700 aa15.97■□□□□ 0.15
SNHG1-216ENST00000541416 PSMD14O00487 310 aa15.97■□□□□ 0.15
SNHG1-216ENST00000541416 HOXB7P09629 217 aa15.97■□□□□ 0.15
SNHG1-216ENST00000541416 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
SNHG1-216ENST00000541416 HDGFL1Q5TGJ6 251 aa15.97■□□□□ 0.15
SNHG1-216ENST00000541416 G3V3G9 751 aa15.96■□□□□ 0.15
SNHG1-216ENST00000541416 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
SNHG1-216ENST00000541416 RGMBQ6NW40 437 aa15.96■□□□□ 0.15
SNHG1-216ENST00000541416 DBNDD1Q9H9R9 158 aa15.96■□□□□ 0.15
SNHG1-216ENST00000541416 GBA2Q9HCG7 927 aaPredicted RBP15.96■□□□□ 0.15
SNHG1-216ENST00000541416 SAGE1Q9NXZ1 904 aa15.96■□□□□ 0.15
SNHG1-216ENST00000541416 CHPF2Q9P2E5 772 aa15.96■□□□□ 0.15
SNHG1-216ENST00000541416 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
SNHG1-216ENST00000541416 LAS1LQ9Y4W2 734 aaKnown RBP15.96■□□□□ 0.15
SNHG1-216ENST00000541416 CASP8AP2Q9UKL3 1982 aa15.96■□□□□ 0.15
SNHG1-216ENST00000541416 DDX60Q8IY21 1712 aaKnown RBP15.95■□□□□ 0.14
SNHG1-216ENST00000541416 CHL1O00533 1208 aa15.95■□□□□ 0.14
SNHG1-216ENST00000541416 RIMBP2O15034 1052 aa15.95■□□□□ 0.14
SNHG1-216ENST00000541416 ECE2O60344 883 aa15.95■□□□□ 0.14
SNHG1-216ENST00000541416 NEUROD2Q15784 382 aa15.95■□□□□ 0.14
SNHG1-216ENST00000541416 TBC1D10BQ4KMP7 808 aaPredicted RBP15.95■□□□□ 0.14
SNHG1-216ENST00000541416 SAMD7Q7Z3H4 446 aa15.95■□□□□ 0.14
SNHG1-216ENST00000541416 SULF1Q8IWU6 871 aa15.95■□□□□ 0.14
SNHG1-216ENST00000541416 FAM89AQ96GI7 184 aa15.95■□□□□ 0.14
SNHG1-216ENST00000541416 ZC3H12CQ9C0D7 883 aaKnown RBP15.95■□□□□ 0.14
SNHG1-216ENST00000541416 HYPKQ9NX55 129 aa15.95■□□□□ 0.14
SNHG1-216ENST00000541416 DUOX1Q9NRD9 1551 aa15.95■□□□□ 0.14
SNHG1-216ENST00000541416 ZNF157P51786 506 aaPredicted RBP15.94■□□□□ 0.14
SNHG1-216ENST00000541416 ISCA1Q9BUE6 129 aa15.94■□□□□ 0.14
SNHG1-216ENST00000541416 TAF1P21675 1872 aa15.94■□□□□ 0.14
SNHG1-216ENST00000541416 SHTN1A0MZ66 631 aa15.93■□□□□ 0.14
SNHG1-216ENST00000541416 RPS8P62241 208 aaKnown RBP15.93■□□□□ 0.14
SNHG1-216ENST00000541416 RBM26Q5T8P6 1007 aaKnown RBP15.93■□□□□ 0.14
SNHG1-216ENST00000541416 REM2Q8IYK8 340 aaPredicted RBP15.93■□□□□ 0.14
SNHG1-216ENST00000541416 CELF1Q92879 486 aaKnown RBP15.93■□□□□ 0.14
SNHG1-216ENST00000541416 ATP5J2-PTCD1G3V325 749 aa15.92■□□□□ 0.14
SNHG1-216ENST00000541416 IRS4O14654 1257 aaPredicted RBP15.92■□□□□ 0.14
SNHG1-216ENST00000541416 GPSM2P81274 684 aa15.92■□□□□ 0.14
SNHG1-216ENST00000541416 TRIM28Q13263 835 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms