RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 LMNB1P20700 586 aa25.47■■□□□ 1.67
RAP1B-223ENST00000541167 GRAPQ13588 217 aa25.47■■□□□ 1.67
RAP1B-223ENST00000541167 GRAPLQ8TC17 118 aaPredicted RBP25.47■■□□□ 1.67
RAP1B-223ENST00000541167 LTBP3Q9NS15 1303 aa25.46■■□□□ 1.67
RAP1B-223ENST00000541167 H7C1W4 665 aa25.46■■□□□ 1.67
RAP1B-223ENST00000541167 RTKN2Q8IZC4 609 aa25.46■■□□□ 1.67
RAP1B-223ENST00000541167 PRELPP51888 382 aa25.45■■□□□ 1.66
RAP1B-223ENST00000541167 RARSP54136 660 aaKnown RBP25.45■■□□□ 1.66
RAP1B-223ENST00000541167 CC2D2BQ6DHV5 1058 aa25.45■■□□□ 1.66
RAP1B-223ENST00000541167 TMX4Q9H1E5 349 aaPredicted RBP25.45■■□□□ 1.66
RAP1B-223ENST00000541167 BBOX1O75936 387 aa25.44■■□□□ 1.66
RAP1B-223ENST00000541167 CCDC152Q4G0S7 254 aa25.44■■□□□ 1.66
RAP1B-223ENST00000541167 CCDC85AQ96PX6 553 aaPredicted RBP25.44■■□□□ 1.66
RAP1B-223ENST00000541167 SRCIN1Q9C0H9 1055 aa25.44■■□□□ 1.66
RAP1B-223ENST00000541167 COL4A1P02462 1669 aa25.44■■□□□ 1.66
RAP1B-223ENST00000541167 ALDH1L1O75891 902 aa25.43■■□□□ 1.66
RAP1B-223ENST00000541167 CTSWP56202 376 aa25.43■■□□□ 1.66
RAP1B-223ENST00000541167 FKBP4Q02790 459 aaKnown RBP eCLIP25.43■■□□□ 1.66
RAP1B-223ENST00000541167 SLC51AQ86UW1 340 aa25.43■■□□□ 1.66
RAP1B-223ENST00000541167 ATP6V0A2Q9Y487 856 aa25.43■■□□□ 1.66
RAP1B-223ENST00000541167 SNED1Q8TER0 1413 aa25.43■■□□□ 1.66
RAP1B-223ENST00000541167 LRRC37AA6NMS7 1700 aa25.43■■□□□ 1.66
RAP1B-223ENST00000541167 CASP7P55210 303 aa25.42■■□□□ 1.66
RAP1B-223ENST00000541167 CELF1Q92879 486 aaKnown RBP25.42■■□□□ 1.66
RAP1B-223ENST00000541167 SPEF2Q9C093 1822 aa25.42■■□□□ 1.66
RAP1B-223ENST00000541167 BRPF1P55201 1214 aaPredicted RBP25.41■■□□□ 1.66
RAP1B-223ENST00000541167 ZNF526Q8TF50 670 aaPredicted RBP25.41■■□□□ 1.66
RAP1B-223ENST00000541167 NOB1Q9ULX3 412 aaKnown RBP25.41■■□□□ 1.66
RAP1B-223ENST00000541167 GRIPAP1Q4V328 841 aa25.4■■□□□ 1.66
RAP1B-223ENST00000541167 TMC4Q7Z404 712 aa25.4■■□□□ 1.66
RAP1B-223ENST00000541167 SEC31BQ9NQW1 1179 aa25.4■■□□□ 1.66
RAP1B-223ENST00000541167 C9orf78Q9NZ63 289 aaPredicted RBP25.4■■□□□ 1.66
RAP1B-223ENST00000541167 KIF16BQ96L93 1317 aa25.39■■□□□ 1.66
RAP1B-223ENST00000541167 GRM8O00222 908 aa25.39■■□□□ 1.66
RAP1B-223ENST00000541167 SP8Q8IXZ3 490 aa25.39■■□□□ 1.66
RAP1B-223ENST00000541167 PLA2G12BQ9BX93 195 aa25.39■■□□□ 1.66
RAP1B-223ENST00000541167 ZNF277Q9NRM2 450 aaPredicted RBP25.39■■□□□ 1.66
RAP1B-223ENST00000541167 ZC3H4Q9UPT8 1303 aaKnown RBP25.38■■□□□ 1.65
RAP1B-223ENST00000541167 TTLL11Q8NHH1 800 aa25.38■■□□□ 1.65
RAP1B-223ENST00000541167 PSMD1Q99460 953 aa25.38■■□□□ 1.65
RAP1B-223ENST00000541167 API5Q9BZZ5 524 aaKnown RBP25.38■■□□□ 1.65
RAP1B-223ENST00000541167 RPS8P62241 208 aaKnown RBP25.37■■□□□ 1.65
RAP1B-223ENST00000541167 GREM2Q9H772 168 aa25.36■■□□□ 1.65
RAP1B-223ENST00000541167 GPBP1L1Q9HC44 474 aaPredicted RBP25.36■■□□□ 1.65
RAP1B-223ENST00000541167 RTL9Q8NET4 1388 aa25.35■■□□□ 1.65
RAP1B-223ENST00000541167 BCAR3O75815 825 aa25.35■■□□□ 1.65
RAP1B-223ENST00000541167 IARSP41252 1262 aaKnown RBP25.35■■□□□ 1.65
RAP1B-223ENST00000541167 DPP8Q6V1X1 898 aaPredicted RBP25.35■■□□□ 1.65
RAP1B-223ENST00000541167 MPNDQ8N594 471 aa25.35■■□□□ 1.65
RAP1B-223ENST00000541167 ANKRD18AQ8IVF6 992 aa25.34■■□□□ 1.65
RAP1B-223ENST00000541167 CDC5LQ99459 802 aaKnown RBP25.34■■□□□ 1.65
RAP1B-223ENST00000541167 FAM161AQ3B820 660 aa25.33■■□□□ 1.65
RAP1B-223ENST00000541167 DUOX1Q9NRD9 1551 aa25.32■■□□□ 1.64
RAP1B-223ENST00000541167 CCT4P50991 539 aaKnown RBP25.32■■□□□ 1.64
RAP1B-223ENST00000541167 SUPT20HQ8NEM7 779 aa25.32■■□□□ 1.64
RAP1B-223ENST00000541167 FRAT1Q92837 279 aaPredicted RBP25.32■■□□□ 1.64
RAP1B-223ENST00000541167 LTBP1Q14766 1721 aa25.32■■□□□ 1.64
RAP1B-223ENST00000541167 IPO8O15397 1037 aaKnown RBP25.31■■□□□ 1.64
RAP1B-223ENST00000541167 CSF1RP07333 972 aa25.31■■□□□ 1.64
RAP1B-223ENST00000541167 NBPF7P0C2Y1 421 aaPredicted RBP25.31■■□□□ 1.64
RAP1B-223ENST00000541167 FOXO4P98177 505 aa25.31■■□□□ 1.64
RAP1B-223ENST00000541167 ARHGAP45Q92619 1136 aa25.31■■□□□ 1.64
RAP1B-223ENST00000541167 CHMP3Q9Y3E7 222 aa25.31■■□□□ 1.64
RAP1B-223ENST00000541167 KDM2BQ8NHM5 1336 aa25.31■■□□□ 1.64
RAP1B-223ENST00000541167 ITGA6P23229 1130 aa25.3■■□□□ 1.64
RAP1B-223ENST00000541167 SUCLG2Q96I99 432 aa25.3■■□□□ 1.64
RAP1B-223ENST00000541167 RTFDC1Q9BY42 306 aaPredicted RBP25.3■■□□□ 1.64
RAP1B-223ENST00000541167 NSFL1CQ9UNZ2 370 aaKnown RBP25.3■■□□□ 1.64
RAP1B-223ENST00000541167 UTYO14607 1347 aa25.3■■□□□ 1.64
RAP1B-223ENST00000541167 PPIP5K2O43314 1243 aa25.29■■□□□ 1.64
RAP1B-223ENST00000541167 GPSM2P81274 684 aa25.29■■□□□ 1.64
RAP1B-223ENST00000541167 EPHA10Q5JZY3 1008 aa25.29■■□□□ 1.64
RAP1B-223ENST00000541167 LARGE2Q8N3Y3 721 aa25.29■■□□□ 1.64
RAP1B-223ENST00000541167 COL4A5P29400 1685 aa25.29■■□□□ 1.64
RAP1B-223ENST00000541167 IGHMBP2P38935 993 aaKnown RBP25.28■■□□□ 1.64
RAP1B-223ENST00000541167 LMBR1LQ6UX01 489 aa25.28■■□□□ 1.64
RAP1B-223ENST00000541167 JDP2Q8WYK2 163 aa25.28■■□□□ 1.64
RAP1B-223ENST00000541167 ANKRD18BA2A2Z9 1011 aa25.27■■□□□ 1.64
RAP1B-223ENST00000541167 GLTPD2A6NH11 291 aa25.27■■□□□ 1.64
RAP1B-223ENST00000541167 AOC3Q16853 763 aa25.27■■□□□ 1.64
RAP1B-223ENST00000541167 ATF7IPQ6VMQ6 1270 aa25.27■■□□□ 1.64
RAP1B-223ENST00000541167 USP44Q9H0E7 712 aa25.27■■□□□ 1.64
RAP1B-223ENST00000541167 TRIM27P14373 513 aa25.26■■□□□ 1.63
RAP1B-223ENST00000541167 DPY19L2Q6NUT2 758 aa25.26■■□□□ 1.63
RAP1B-223ENST00000541167 NMRK2Q9NPI5 230 aa25.26■■□□□ 1.63
RAP1B-223ENST00000541167 C6orf229H3BNL8 230 aa25.25■■□□□ 1.63
RAP1B-223ENST00000541167 IFIT5Q13325 482 aaKnown RBP25.25■■□□□ 1.63
RAP1B-223ENST00000541167 ZKSCAN2Q63HK3 967 aa25.25■■□□□ 1.63
RAP1B-223ENST00000541167 NIM1KQ8IY84 436 aa25.25■■□□□ 1.63
RAP1B-223ENST00000541167 KAZALD1Q96I82 304 aa25.25■■□□□ 1.63
RAP1B-223ENST00000541167 VPS33BQ9H267 617 aa25.25■■□□□ 1.63
RAP1B-223ENST00000541167 BSDC1Q9NW68 430 aaPredicted RBP25.25■■□□□ 1.63
RAP1B-223ENST00000541167 ANKIB1Q9P2G1 1089 aa25.25■■□□□ 1.63
RAP1B-223ENST00000541167 MPHOSPH8Q99549 860 aa25.24■■□□□ 1.63
RAP1B-223ENST00000541167 TNNQ9UQP3 1299 aa25.24■■□□□ 1.63
RAP1B-223ENST00000541167 WDR90Q96KV7 1748 aa25.23■■□□□ 1.63
RAP1B-223ENST00000541167 ZNF541Q9H0D2 1346 aa25.23■■□□□ 1.63
RAP1B-223ENST00000541167 KIAA2012Q0VF49 1180 aa25.23■■□□□ 1.63
RAP1B-223ENST00000541167 CCDC57Q2TAC2 916 aa25.23■■□□□ 1.63
RAP1B-223ENST00000541167 CLUAP1Q96AJ1 413 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms