RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TRMT1Q9NXH9 659 aaKnown RBP16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 USP16Q9Y5T5 823 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 PSMA5P28066 241 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 MTX1Q13505 466 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 NBPF6Q5VWK0 638 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 NBPF4Q96M43 638 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
SCNN1A-215ENST00000540037 AIMP1Q12904 312 aaKnown RBP16.44■□□□□ 0.22
SCNN1A-215ENST00000540037 CEP135Q66GS9 1140 aa16.44■□□□□ 0.22
SCNN1A-215ENST00000540037 PODXL2Q9NZ53 605 aa16.44■□□□□ 0.22
SCNN1A-215ENST00000540037 OGFRQ9NZT2 677 aa16.44■□□□□ 0.22
SCNN1A-215ENST00000540037 COL15A1P39059 1388 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 KIF20AO95235 890 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 CCDC129Q6ZRS4 1044 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 LRRC8AQ8IWT6 810 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 CEMIPQ8WUJ3 1361 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 RESTQ13127 1097 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 IQCB1Q15051 598 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 SYTL4Q96C24 671 aaPredicted RBP16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 AGLP35573 1532 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 NPHP1O15259 732 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 ZNF771Q7L3S4 317 aaPredicted RBP16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 FEZ1Q99689 392 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
SCNN1A-215ENST00000540037 TNRQ92752 1358 aa16.42■□□□□ 0.22
SCNN1A-215ENST00000540037 LRRC59Q96AG4 307 aaKnown RBP16.42■□□□□ 0.22
SCNN1A-215ENST00000540037 SEC62Q99442 399 aaKnown RBP16.42■□□□□ 0.22
SCNN1A-215ENST00000540037 GOLPH3LQ9H4A5 285 aa16.42■□□□□ 0.22
SCNN1A-215ENST00000540037 TEFQ10587 303 aa16.41■□□□□ 0.22
SCNN1A-215ENST00000540037 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
SCNN1A-215ENST00000540037 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
SCNN1A-215ENST00000540037 G3BP1Q13283 466 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCNN1A-215ENST00000540037 KMT5BQ4FZB7 885 aa16.41■□□□□ 0.22
SCNN1A-215ENST00000540037 Q6ZUG5 572 aa16.41■□□□□ 0.22
SCNN1A-215ENST00000540037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.41■□□□□ 0.22
SCNN1A-215ENST00000540037 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
SCNN1A-215ENST00000540037 DIP2BQ9P265 1576 aa16.41■□□□□ 0.22
SCNN1A-215ENST00000540037 H3BQV1 296 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 TAF5LO75529 589 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 SKILP12757 684 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 RNF20Q5VTR2 975 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 GTF3C6Q969F1 213 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 CCDC9Q9Y3X0 531 aaKnown RBP16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 PAXBP1Q9Y5B6 917 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 GOLGA6L19H0YKK7 550 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 CEBPAP49715 358 aaPredicted RBP16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 ANKRD1Q15327 319 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 SLFNL1Q499Z3 407 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 KIF18AQ8NI77 898 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 DBF4Q9UBU7 674 aaPredicted RBP16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 MED23Q9ULK4 1368 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 ST7Q9NRC1 585 aa16.4■□□□□ 0.22
SCNN1A-215ENST00000540037 SCRN1Q12765 414 aa16.39■□□□□ 0.21
SCNN1A-215ENST00000540037 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
SCNN1A-215ENST00000540037 CCAR1Q8IX12 1150 aaKnown RBP16.39■□□□□ 0.21
SCNN1A-215ENST00000540037 CGNQ9P2M7 1197 aaKnown RBP16.39■□□□□ 0.21
SCNN1A-215ENST00000540037 GRM8O00222 908 aa16.38■□□□□ 0.21
SCNN1A-215ENST00000540037 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
SCNN1A-215ENST00000540037 GUCY1B3Q02153 619 aa16.38■□□□□ 0.21
SCNN1A-215ENST00000540037 ELF2Q15723 593 aa16.38■□□□□ 0.21
SCNN1A-215ENST00000540037 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
SCNN1A-215ENST00000540037 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
SCNN1A-215ENST00000540037 CCDC69A6NI79 296 aa16.38■□□□□ 0.21
SCNN1A-215ENST00000540037 SLFN14P0C7P3 912 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 CCZ1BP86790 482 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 CCZ1P86791 482 aaPredicted RBP16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 PTPN14Q15678 1187 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 EPHA10Q5JZY3 1008 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 DHX40Q8IX18 779 aaKnown RBP16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 SNRKQ9NRH2 765 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 HIP1O00291 1037 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 SYCP1Q15431 976 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 A0A0G2JLW4 131 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 GIGYF1O75420 1035 aaPredicted RBP16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 CYP21A2P08686 494 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 SNW1Q13573 536 aaKnown RBP16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 FBXO38Q6PIJ6 1188 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 NYAP1Q6ZVC0 841 aa16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 RBM33Q96EV2 1170 aaKnown RBP16.37■□□□□ 0.21
SCNN1A-215ENST00000540037 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 BECN2A8MW95 431 aa16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 CCT2P78371 535 aaKnown RBP16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 LRRN4CLQ8ND94 238 aa16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 USP28Q96RU2 1077 aa16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 NCOA5Q9HCD5 579 aaKnown RBP16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 ERBB3P21860 1342 aa16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 HOXB7P09629 217 aa16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
SCNN1A-215ENST00000540037 ZBTB22O15209 634 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 CDC25BP30305 580 aa16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 RBM6P78332 1123 aaKnown RBP16.35■□□□□ 0.21
SCNN1A-215ENST00000540037 STOX1Q6ZVD7 989 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms