RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 PDIA6Q15084 440 aa13.46□□□□□ -0.25
VPS37C-204ENST00000538036 LRP10Q7Z4F1 713 aa13.46□□□□□ -0.25
VPS37C-204ENST00000538036 BCL2L13Q9BXK5 485 aa13.46□□□□□ -0.25
VPS37C-204ENST00000538036 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
VPS37C-204ENST00000538036 H7C1D1 291 aa13.45□□□□□ -0.26
VPS37C-204ENST00000538036 NOGQ13253 232 aa13.45□□□□□ -0.26
VPS37C-204ENST00000538036 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
VPS37C-204ENST00000538036 THUMPD2Q9BTF0 503 aaKnown RBP13.45□□□□□ -0.26
VPS37C-204ENST00000538036 GLIS2Q9BZE0 524 aaPredicted RBP13.45□□□□□ -0.26
VPS37C-204ENST00000538036 TSPYL4Q9UJ04 414 aa13.45□□□□□ -0.26
VPS37C-204ENST00000538036 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
VPS37C-204ENST00000538036 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
VPS37C-204ENST00000538036 GRAPQ13588 217 aa13.44□□□□□ -0.26
VPS37C-204ENST00000538036 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
VPS37C-204ENST00000538036 NLRP10Q86W26 655 aa13.44□□□□□ -0.26
VPS37C-204ENST00000538036 GRAPLQ8TC17 118 aaPredicted RBP13.44□□□□□ -0.26
VPS37C-204ENST00000538036 DPF2Q92785 391 aa13.44□□□□□ -0.26
VPS37C-204ENST00000538036 CNOT7Q9UIV1 285 aaKnown RBP13.44□□□□□ -0.26
VPS37C-204ENST00000538036 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
VPS37C-204ENST00000538036 RAD17O75943 681 aa13.43□□□□□ -0.26
VPS37C-204ENST00000538036 EIF2S2P20042 333 aaKnown RBP13.43□□□□□ -0.26
VPS37C-204ENST00000538036 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
VPS37C-204ENST00000538036 TCIRG1Q13488 830 aa13.43□□□□□ -0.26
VPS37C-204ENST00000538036 MCOLN1Q9GZU1 580 aa13.43□□□□□ -0.26
VPS37C-204ENST00000538036 TRMT112Q9UI30 125 aaKnown RBP13.43□□□□□ -0.26
VPS37C-204ENST00000538036 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
VPS37C-204ENST00000538036 HCLS1P14317 486 aaPredicted RBP13.42□□□□□ -0.26
VPS37C-204ENST00000538036 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
VPS37C-204ENST00000538036 COPS6Q7L5N1 327 aa13.42□□□□□ -0.26
VPS37C-204ENST00000538036 ZNF408Q9H9D4 720 aa13.42□□□□□ -0.26
VPS37C-204ENST00000538036 LMOD3Q0VAK6 560 aa13.41□□□□□ -0.26
VPS37C-204ENST00000538036 PROSER3Q2NL68 480 aa13.41□□□□□ -0.26
VPS37C-204ENST00000538036 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
VPS37C-204ENST00000538036 TRPM4Q8TD43 1214 aa13.41□□□□□ -0.26
VPS37C-204ENST00000538036 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
VPS37C-204ENST00000538036 YDJCA8MPS7 323 aa13.4□□□□□ -0.26
VPS37C-204ENST00000538036 RPS12P25398 132 aaKnown RBP13.4□□□□□ -0.26
VPS37C-204ENST00000538036 HUNKP57058 714 aa13.4□□□□□ -0.26
VPS37C-204ENST00000538036 RIPK4P57078 832 aa13.4□□□□□ -0.26
VPS37C-204ENST00000538036 DGKZQ13574 1117 aa13.4□□□□□ -0.26
VPS37C-204ENST00000538036 WASHC4Q2M389 1173 aa13.4□□□□□ -0.26
VPS37C-204ENST00000538036 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
VPS37C-204ENST00000538036 XAGE3Q8WTP9 111 aa13.4□□□□□ -0.26
VPS37C-204ENST00000538036 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
VPS37C-204ENST00000538036 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
VPS37C-204ENST00000538036 KRT26Q7Z3Y9 468 aa13.39□□□□□ -0.27
VPS37C-204ENST00000538036 C2orf69Q8N8R5 385 aa13.39□□□□□ -0.27
VPS37C-204ENST00000538036 SAGE1Q9NXZ1 904 aa13.39□□□□□ -0.27
VPS37C-204ENST00000538036 ANXA1P04083 346 aa13.38□□□□□ -0.27
VPS37C-204ENST00000538036 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
VPS37C-204ENST00000538036 RGMBQ6NW40 437 aa13.38□□□□□ -0.27
VPS37C-204ENST00000538036 DCPSQ96C86 337 aaKnown RBP13.38□□□□□ -0.27
VPS37C-204ENST00000538036 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
VPS37C-204ENST00000538036 EYA3Q99504 573 aa13.38□□□□□ -0.27
VPS37C-204ENST00000538036 NSFL1CQ9UNZ2 370 aaKnown RBP13.38□□□□□ -0.27
VPS37C-204ENST00000538036 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
VPS37C-204ENST00000538036 PSMD14O00487 310 aa13.37□□□□□ -0.27
VPS37C-204ENST00000538036 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
VPS37C-204ENST00000538036 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
VPS37C-204ENST00000538036 PLBD2Q8NHP8 589 aa13.37□□□□□ -0.27
VPS37C-204ENST00000538036 GBA2Q9HCG7 927 aaPredicted RBP13.37□□□□□ -0.27
VPS37C-204ENST00000538036 ZBTB12Q9Y330 459 aaPredicted RBP13.37□□□□□ -0.27
VPS37C-204ENST00000538036 ANKRD36CQ5JPF3 1778 aa13.36□□□□□ -0.27
VPS37C-204ENST00000538036 SHTN1A0MZ66 631 aa13.36□□□□□ -0.27
VPS37C-204ENST00000538036 FAM155AB1AL88 458 aaPredicted RBP13.36□□□□□ -0.27
VPS37C-204ENST00000538036 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
VPS37C-204ENST00000538036 CHL1O00533 1208 aa13.36□□□□□ -0.27
VPS37C-204ENST00000538036 TMPOP42166 694 aaKnown RBP13.36□□□□□ -0.27
VPS37C-204ENST00000538036 ANKRD13DQ6ZTN6 518 aa13.36□□□□□ -0.27
VPS37C-204ENST00000538036 ZIC5Q96T25 663 aa13.36□□□□□ -0.27
VPS37C-204ENST00000538036 HOXB7P09629 217 aa13.35□□□□□ -0.27
VPS37C-204ENST00000538036 HSP90B1P14625 803 aaKnown RBP13.35□□□□□ -0.27
VPS37C-204ENST00000538036 ZNF157P51786 506 aaPredicted RBP13.35□□□□□ -0.27
VPS37C-204ENST00000538036 TRIM28Q13263 835 aaKnown RBP13.35□□□□□ -0.27
VPS37C-204ENST00000538036 TBC1D10BQ4KMP7 808 aaPredicted RBP13.35□□□□□ -0.27
VPS37C-204ENST00000538036 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
VPS37C-204ENST00000538036 ISCA1Q9BUE6 129 aa13.35□□□□□ -0.27
VPS37C-204ENST00000538036 DBNDD1Q9H9R9 158 aa13.35□□□□□ -0.27
VPS37C-204ENST00000538036 POLLQ9UGP5 575 aa13.35□□□□□ -0.27
VPS37C-204ENST00000538036 RIMBP2O15034 1052 aa13.34□□□□□ -0.27
VPS37C-204ENST00000538036 ECE2O60344 883 aa13.34□□□□□ -0.27
VPS37C-204ENST00000538036 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
VPS37C-204ENST00000538036 KIF23Q02241 960 aaPredicted RBP13.34□□□□□ -0.27
VPS37C-204ENST00000538036 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
VPS37C-204ENST00000538036 CELF1Q92879 486 aaKnown RBP13.34□□□□□ -0.27
VPS37C-204ENST00000538036 FAM89AQ96GI7 184 aa13.34□□□□□ -0.27
VPS37C-204ENST00000538036 ZC3H12CQ9C0D7 883 aaKnown RBP13.34□□□□□ -0.27
VPS37C-204ENST00000538036 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
VPS37C-204ENST00000538036 DUOX1Q9NRD9 1551 aa13.33□□□□□ -0.28
VPS37C-204ENST00000538036 CASP8AP2Q9UKL3 1982 aa13.33□□□□□ -0.28
VPS37C-204ENST00000538036 VIL1P09327 827 aaKnown RBP13.33□□□□□ -0.28
VPS37C-204ENST00000538036 GPSM2P81274 684 aa13.33□□□□□ -0.28
VPS37C-204ENST00000538036 RBM26Q5T8P6 1007 aaKnown RBP13.33□□□□□ -0.28
VPS37C-204ENST00000538036 TBC1D16Q8TBP0 767 aa13.33□□□□□ -0.28
VPS37C-204ENST00000538036 HYPKQ9NX55 129 aa13.33□□□□□ -0.28
VPS37C-204ENST00000538036 RNF186Q9NXI6 227 aa13.33□□□□□ -0.28
VPS37C-204ENST00000538036 PODXL2Q9NZ53 605 aa13.33□□□□□ -0.28
VPS37C-204ENST00000538036 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.28
VPS37C-204ENST00000538036 TRPA1O75762 1119 aa13.32□□□□□ -0.28
VPS37C-204ENST00000538036 EGFRP00533 1210 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms