RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
CDK5RAP3-202ENST00000536708 SLKQ9H2G2 1235 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-202ENST00000536708 CHMP3Q9Y3E7 222 aa15.89■□□□□ 0.13
CDK5RAP3-202ENST00000536708 CLEC4GQ6UXB4 293 aa15.89■□□□□ 0.13
CDK5RAP3-202ENST00000536708 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-202ENST00000536708 ABCC12Q96J65 1359 aa15.88■□□□□ 0.13
CDK5RAP3-202ENST00000536708 ADRA2BP18089 450 aa15.88■□□□□ 0.13
CDK5RAP3-202ENST00000536708 SIL1Q9H173 461 aa15.88■□□□□ 0.13
CDK5RAP3-202ENST00000536708 CDHR2Q9BYE9 1310 aa15.88■□□□□ 0.13
CDK5RAP3-202ENST00000536708 IRS4O14654 1257 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 EIF5BO60841 1220 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 HCLS1P14317 486 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 SURF6O75683 361 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 GYS1P13807 737 aa15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 CCDC24Q8N4L8 307 aa15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 OTUD7AQ8TE49 926 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 PNPLA7Q6ZV29 1317 aa15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 SH3TC1Q8TE82 1336 aa15.87■□□□□ 0.13
CDK5RAP3-202ENST00000536708 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-202ENST00000536708 SF3B2Q13435 895 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-202ENST00000536708 PARP10Q53GL7 1025 aa15.86■□□□□ 0.13
CDK5RAP3-202ENST00000536708 COL23A1Q86Y22 540 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-202ENST00000536708 CHMP5Q9NZZ3 219 aa15.86■□□□□ 0.13
CDK5RAP3-202ENST00000536708 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-202ENST00000536708 BAG6P46379 1132 aa15.86■□□□□ 0.13
CDK5RAP3-202ENST00000536708 HDAC5Q9UQL6 1122 aa15.86■□□□□ 0.13
CDK5RAP3-202ENST00000536708 LRP5O75197 1615 aa15.85■□□□□ 0.13
CDK5RAP3-202ENST00000536708 CTSWP56202 376 aa15.85■□□□□ 0.13
CDK5RAP3-202ENST00000536708 NFIXQ14938 502 aa15.85■□□□□ 0.13
CDK5RAP3-202ENST00000536708 ERFEQ4G0M1 354 aa15.85■□□□□ 0.13
CDK5RAP3-202ENST00000536708 HSCBQ8IWL3 235 aa15.85■□□□□ 0.13
CDK5RAP3-202ENST00000536708 C16orf71Q8IYS4 520 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-202ENST00000536708 ZNF594Q96JF6 807 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-202ENST00000536708 IL1RAPL2Q9NP60 686 aa15.85■□□□□ 0.13
CDK5RAP3-202ENST00000536708 C3orf67Q6ZVT6 689 aa15.84■□□□□ 0.13
CDK5RAP3-202ENST00000536708 SETDB2Q96T68 719 aa15.84■□□□□ 0.13
CDK5RAP3-202ENST00000536708 A0A1B0GUL6 1792 aa15.84■□□□□ 0.13
CDK5RAP3-202ENST00000536708 ANKRD31Q8N7Z5 1873 aa15.84■□□□□ 0.13
CDK5RAP3-202ENST00000536708 DDIT3P35638 169 aa15.84■□□□□ 0.13
CDK5RAP3-202ENST00000536708 PTPN12Q05209 780 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-202ENST00000536708 PLA2G12BQ9BX93 195 aa15.84■□□□□ 0.13
CDK5RAP3-202ENST00000536708 GREM2Q9H772 168 aa15.84■□□□□ 0.13
CDK5RAP3-202ENST00000536708 CARMIL3Q8ND23 1372 aa15.83■□□□□ 0.13
CDK5RAP3-202ENST00000536708 OS9Q13438 667 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-202ENST00000536708 TTLL11Q8NHH1 800 aa15.83■□□□□ 0.12
CDK5RAP3-202ENST00000536708 LRRCC1Q9C099 1032 aa15.83■□□□□ 0.12
CDK5RAP3-202ENST00000536708 RGL2O15211 777 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 TBC1D9Q6ZT07 1266 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 NBPF5PQ86XG9 351 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 PLEKHM2Q8IWE5 1019 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 KIF2CQ99661 725 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 PDGFDQ9GZP0 370 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 NRXN2Q9P2S2 1712 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 PDE8AO60658 829 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 DDR1Q08345 913 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 SLC15A2Q16348 729 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 MSL1Q68DK7 614 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 RHPN1Q8TCX5 695 aa15.82■□□□□ 0.12
CDK5RAP3-202ENST00000536708 CDC45O75419 566 aa15.81■□□□□ 0.12
CDK5RAP3-202ENST00000536708 CSF1RP07333 972 aa15.81■□□□□ 0.12
CDK5RAP3-202ENST00000536708 TSHZ3Q63HK5 1081 aa15.81■□□□□ 0.12
CDK5RAP3-202ENST00000536708 FAM43AQ8N2R8 423 aa15.81■□□□□ 0.12
CDK5RAP3-202ENST00000536708 SASH1O94885 1247 aa15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 ITGA6P23229 1130 aa15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 MCM4P33991 863 aa15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 PUS3Q9BZE2 481 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 COPRSQ9NQ92 184 aa15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 CIZ1Q9ULV3 898 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 GOLGB1Q14789 3259 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 RIC1Q4ADV7 1423 aa15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 LRRC24Q50LG9 513 aa15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 AK9Q5TCS8 1911 aa15.8■□□□□ 0.12
CDK5RAP3-202ENST00000536708 COL11A2P13942 1736 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-202ENST00000536708 GSPT1P15170 499 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-202ENST00000536708 GTF2E1P29083 439 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-202ENST00000536708 SEC31BQ9NQW1 1179 aa15.79■□□□□ 0.12
CDK5RAP3-202ENST00000536708 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
CDK5RAP3-202ENST00000536708 CACNA1SQ13698 1873 aa15.79■□□□□ 0.12
CDK5RAP3-202ENST00000536708 CCDC57Q2TAC2 916 aa15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 TTC22Q5TAA0 569 aa15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 ATG9AQ7Z3C6 839 aa15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 CNBD1Q8NA66 436 aa15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 KIF1BPQ96EK5 621 aa15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 SALL3Q9BXA9 1300 aa15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 POLRMTO00411 1230 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 NPHP1O15259 732 aa15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 G3BP1Q13283 466 aaKnown RBP eCLIP15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 IFIT5Q13325 482 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 PRR5LQ6MZQ0 368 aa15.78■□□□□ 0.12
CDK5RAP3-202ENST00000536708 RAB11FIP3O75154 756 aa15.77■□□□□ 0.12
CDK5RAP3-202ENST00000536708 TM4SF1P30408 202 aa15.77■□□□□ 0.12
CDK5RAP3-202ENST00000536708 NYXQ9GZU5 481 aa15.77■□□□□ 0.12
CDK5RAP3-202ENST00000536708 TFCP2Q12800 502 aa15.76■□□□□ 0.11
CDK5RAP3-202ENST00000536708 HSP90AB4PQ58FF6 505 aa15.76■□□□□ 0.11
CDK5RAP3-202ENST00000536708 TLR7Q9NYK1 1049 aaKnown RBP15.76■□□□□ 0.11
CDK5RAP3-202ENST00000536708 SERPINB2P05120 415 aa15.76■□□□□ 0.11
CDK5RAP3-202ENST00000536708 TAF7LQ5H9L4 462 aa15.76■□□□□ 0.11
CDK5RAP3-202ENST00000536708 TPTE2Q6XPS3 522 aa15.76■□□□□ 0.11
CDK5RAP3-202ENST00000536708 ANKRD18BA2A2Z9 1011 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms