RNA–Protein interactions for RNA: ENST00000536554.5

TOM1L1-203, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-203ENST00000536554 BTAF1O14981 1849 aa10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 HLFQ16534 295 aa10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 DZIP3Q86Y13 1208 aaKnown RBP10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 SMC5Q8IY18 1101 aa10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 CCDC191Q8NCU4 936 aa10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 DDX27Q96GQ7 796 aaKnown RBP10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 ARXQ96QS3 562 aa10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 TMEM121BQ9BXQ6 578 aaPredicted RBP10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 TBC1D2BQ9UPU7 963 aa10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 LRRFIP2Q9Y608 721 aaKnown RBP10.12□□□□□ -0.79
TOM1L1-203ENST00000536554 EP400Q96L91 3159 aa10.11□□□□□ -0.79
TOM1L1-203ENST00000536554 A0A087WZG4 1122 aa10.11□□□□□ -0.79
TOM1L1-203ENST00000536554 H7C1W4 665 aa10.11□□□□□ -0.79
TOM1L1-203ENST00000536554 HMGB2P26583 209 aaKnown RBP10.11□□□□□ -0.79
TOM1L1-203ENST00000536554 MFSD10Q14728 455 aa10.11□□□□□ -0.79
TOM1L1-203ENST00000536554 L3MBTL3Q96JM7 780 aaPredicted RBP10.11□□□□□ -0.79
TOM1L1-203ENST00000536554 APBA3O96018 575 aa10.1□□□□□ -0.79
TOM1L1-203ENST00000536554 CASP7P55210 303 aa10.1□□□□□ -0.79
TOM1L1-203ENST00000536554 HSP90AB3PQ58FF7 597 aa10.1□□□□□ -0.79
TOM1L1-203ENST00000536554 GCC1Q96CN9 775 aa10.1□□□□□ -0.79
TOM1L1-203ENST00000536554 KAZALD1Q96I82 304 aa10.1□□□□□ -0.79
TOM1L1-203ENST00000536554 DCTPP1Q9H773 170 aa10.1□□□□□ -0.79
TOM1L1-203ENST00000536554 CWC25Q9NXE8 425 aaPredicted RBP10.1□□□□□ -0.79
TOM1L1-203ENST00000536554 HMMRO75330 724 aa10.09□□□□□ -0.79
TOM1L1-203ENST00000536554 CAMTA2O94983 1202 aa10.09□□□□□ -0.79
TOM1L1-203ENST00000536554 MTX1Q13505 466 aa10.09□□□□□ -0.79
TOM1L1-203ENST00000536554 TXNRD1Q16881 649 aa10.09□□□□□ -0.79
TOM1L1-203ENST00000536554 ZNF34Q8IZ26 560 aa10.09□□□□□ -0.79
TOM1L1-203ENST00000536554 RREB1Q92766 1687 aa10.09□□□□□ -0.79
TOM1L1-203ENST00000536554 PNMA6EA0A0J9YXQ4 647 aa10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 E2F4Q16254 413 aa10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 CLEC4GQ6UXB4 293 aa10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 SSH3Q8TE77 659 aa10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 SUCLG2Q96I99 432 aa10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 GPHNQ9NQX3 736 aaPredicted RBP10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 RTCBQ9Y3I0 505 aaKnown RBP10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 LY75O60449 1722 aa10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 COL15A1P39059 1388 aa10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 N4BP2Q86UW6 1770 aaPredicted RBP10.08□□□□□ -0.8
TOM1L1-203ENST00000536554 SNPHO15079 494 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 GNPATO15228 680 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 NUCB1Q02818 461 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 PPP1R42Q7Z4L9 355 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 NLRP10Q86W26 655 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 TMC2Q8TDI7 906 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 JARID2Q92833 1246 aaPredicted RBP10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 ARHGEF1Q92888 912 aaKnown RBP10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 NARFQ9UHQ1 456 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 COL5A3P25940 1745 aaPredicted RBP10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 MYH14Q7Z406 1995 aaKnown RBP10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 PCCAP05165 728 aaPredicted RBP10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 EPHA10Q5JZY3 1008 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 TRAPPC3LQ5T215 181 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 SMIM5Q71RC9 77 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 UBE3BQ7Z3V4 1068 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 AMIGO3Q86WK7 504 aa10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 ZBTB38Q8NAP3 1195 aaPredicted RBP10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 BICC1Q9H694 974 aaKnown RBP10.07□□□□□ -0.8
TOM1L1-203ENST00000536554 ARFGEF2Q9Y6D5 1785 aa10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 SRGAP3O43295 1099 aa10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 GPTP24298 496 aa10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 FOXO4P98177 505 aa10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 RABL6Q3YEC7 729 aaPredicted RBP10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 PPP1R15BQ5SWA1 713 aa10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 ANKRD45Q5TZF3 282 aa10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 SKAP1Q86WV1 359 aa10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 AK7Q96M32 723 aa10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 ZNF652Q9Y2D9 606 aa10.06□□□□□ -0.8
TOM1L1-203ENST00000536554 NUP188Q5SRE5 1749 aa10.05□□□□□ -0.8
TOM1L1-203ENST00000536554 PARP10Q53GL7 1025 aa10.05□□□□□ -0.8
TOM1L1-203ENST00000536554 CHD1LQ86WJ1 897 aa10.05□□□□□ -0.8
TOM1L1-203ENST00000536554 FAM89AQ96GI7 184 aa10.05□□□□□ -0.8
TOM1L1-203ENST00000536554 PLA2G12BQ9BX93 195 aa10.05□□□□□ -0.8
TOM1L1-203ENST00000536554 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
TOM1L1-203ENST00000536554 NOP58Q9Y2X3 529 aaKnown RBP10.05□□□□□ -0.8
TOM1L1-203ENST00000536554 UBN2Q6ZU65 1347 aa10.05□□□□□ -0.8
TOM1L1-203ENST00000536554 ZPR1O75312 459 aa10.04□□□□□ -0.8
TOM1L1-203ENST00000536554 RFC4P35249 363 aa10.04□□□□□ -0.8
TOM1L1-203ENST00000536554 RTL5Q5HYW3 569 aaPredicted RBP10.04□□□□□ -0.8
TOM1L1-203ENST00000536554 SUSD4Q5VX71 490 aa10.04□□□□□ -0.8
TOM1L1-203ENST00000536554 USPL1Q5W0Q7 1092 aa10.04□□□□□ -0.8
TOM1L1-203ENST00000536554 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
TOM1L1-203ENST00000536554 TRMT112Q9UI30 125 aaKnown RBP10.04□□□□□ -0.8
TOM1L1-203ENST00000536554 NIP7Q9Y221 180 aaKnown RBP eCLIP10.04□□□□□ -0.8
TOM1L1-203ENST00000536554 CDHR2Q9BYE9 1310 aa10.04□□□□□ -0.8
TOM1L1-203ENST00000536554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 RAB11FIP3O75154 756 aa10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 CSF1RP07333 972 aa10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 SSFA2P28290 1259 aa10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 DSG2Q14126 1118 aa10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 LMBR1LQ6UX01 489 aa10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 SYNE4Q8N205 404 aa10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 UTP14AQ9BVJ6 771 aaKnown RBP10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 SRP68Q9UHB9 627 aaKnown RBP10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 C4BP0C0L5 1744 aa10.03□□□□□ -0.8
TOM1L1-203ENST00000536554 C2orf72A6NCS6 295 aa10.02□□□□□ -0.8
TOM1L1-203ENST00000536554 PHF14O94880 888 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms