RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 BCL2L13Q9BXK5 485 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 RTFDC1Q9BY42 306 aaPredicted RBP7.03□□□□□ -1.28
CHD4-205ENST00000536301 GBA2Q9HCG7 927 aaPredicted RBP7.03□□□□□ -1.28
CHD4-205ENST00000536301 KCNQ5Q9NR82 932 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 ATP6V0A2Q9Y487 856 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 CENPFP49454 3210 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 BRCA2P51587 3418 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 DLG5Q8TDM6 1919 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 TRIOBPQ9H2D6 2365 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 KDM3BQ7LBC6 1761 aa7.03□□□□□ -1.28
CHD4-205ENST00000536301 CEP290O15078 2479 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 RGL2O15211 777 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 SLC10A3P09131 477 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 MYL6BP14649 208 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 ZNF157P51786 506 aaPredicted RBP7.02□□□□□ -1.29
CHD4-205ENST00000536301 KIAA2012Q0VF49 1180 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 KRT26Q7Z3Y9 468 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 ZNF34Q8IZ26 560 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 ZC3H15Q8WU90 426 aaKnown RBP7.02□□□□□ -1.29
CHD4-205ENST00000536301 NYXQ9GZU5 481 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 SAGE1Q9NXZ1 904 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 SCAF8Q9UPN6 1271 aaKnown RBP7.02□□□□□ -1.29
CHD4-205ENST00000536301 RRP7AQ9Y3A4 280 aaKnown RBP7.02□□□□□ -1.29
CHD4-205ENST00000536301 IBTKQ9P2D0 1353 aaPredicted RBP7.02□□□□□ -1.29
CHD4-205ENST00000536301 ANKRD36CQ5JPF3 1778 aa7.02□□□□□ -1.29
CHD4-205ENST00000536301 ERVV-1B6SEH8 477 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 PSMD14O00487 310 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 HABP4Q5JVS0 413 aaKnown RBP7.01□□□□□ -1.29
CHD4-205ENST00000536301 RBM26Q5T8P6 1007 aaKnown RBP7.01□□□□□ -1.29
CHD4-205ENST00000536301 DPP8Q6V1X1 898 aaPredicted RBP7.01□□□□□ -1.29
CHD4-205ENST00000536301 MOB2Q70IA6 237 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 RASAL3Q86YV0 1011 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 MPNDQ8N594 471 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 THUMPD2Q9BTF0 503 aaKnown RBP7.01□□□□□ -1.29
CHD4-205ENST00000536301 R3HDMLQ9H3Y0 253 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 DBNDD1Q9H9R9 158 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 SZT2Q5T011 3432 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 LRRC37AA6NMS7 1700 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 CDHR2Q9BYE9 1310 aa7.01□□□□□ -1.29
CHD4-205ENST00000536301 RTL9Q8NET4 1388 aa7□□□□□ -1.29
CHD4-205ENST00000536301 H7C1D1 291 aa7□□□□□ -1.29
CHD4-205ENST00000536301 TBC1D8O95759 1140 aa7□□□□□ -1.29
CHD4-205ENST00000536301 ANXA1P04083 346 aa7□□□□□ -1.29
CHD4-205ENST00000536301 HCLS1P14317 486 aaPredicted RBP7□□□□□ -1.29
CHD4-205ENST00000536301 GRIPAP1Q4V328 841 aa7□□□□□ -1.29
CHD4-205ENST00000536301 LRP10Q7Z4F1 713 aa7□□□□□ -1.29
CHD4-205ENST00000536301 C2orf69Q8N8R5 385 aa7□□□□□ -1.29
CHD4-205ENST00000536301 ZNF296Q8WUU4 475 aaPredicted RBP7□□□□□ -1.29
CHD4-205ENST00000536301 DDX60Q8IY21 1712 aaKnown RBP6.99□□□□□ -1.29
CHD4-205ENST00000536301 POTEFA5A3E0 1075 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 RIMBP2O15034 1052 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 TNIP1Q15025 636 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 PROSER3Q2NL68 480 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 SLC10A5Q5PT55 438 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 GIGYF2Q6Y7W6 1299 aaKnown RBP6.99□□□□□ -1.29
CHD4-205ENST00000536301 KIF6Q6ZMV9 814 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 SP8Q8IXZ3 490 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 SUPT20HQ8NEM7 779 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 CCDC102AQ96A19 550 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 CDCA5Q96FF9 252 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 NLRP3Q96P20 1036 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 VPS33BQ9H267 617 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 GGA3Q9NZ52 723 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 PAPPA2Q9BXP8 1791 aa6.99□□□□□ -1.29
CHD4-205ENST00000536301 FXR1P51114 621 aaKnown RBP eCLIP6.98□□□□□ -1.295e-7■■■□□ 16.3
CHD4-205ENST00000536301 EIF4A1P60842 406 aaKnown RBP6.98□□□□□ -1.29
CHD4-205ENST00000536301 MKRN3Q13064 507 aaKnown RBP6.98□□□□□ -1.29
CHD4-205ENST00000536301 PDIA6Q15084 440 aa6.98□□□□□ -1.29
CHD4-205ENST00000536301 TAF7Q15545 349 aaPredicted RBP6.98□□□□□ -1.29
CHD4-205ENST00000536301 DOK7Q18PE1 504 aa6.98□□□□□ -1.29
CHD4-205ENST00000536301 KIF4BQ2VIQ3 1234 aa6.98□□□□□ -1.29
CHD4-205ENST00000536301 PRAMEF18Q5VWM3 479 aa6.98□□□□□ -1.29
CHD4-205ENST00000536301 RTF1Q92541 710 aaKnown RBP6.98□□□□□ -1.29
CHD4-205ENST00000536301 DPF2Q92785 391 aa6.98□□□□□ -1.29
CHD4-205ENST00000536301 POLLQ9UGP5 575 aa6.98□□□□□ -1.29
CHD4-205ENST00000536301 UBE2Q2LH0YL09 131 aa6.97□□□□□ -1.29
CHD4-205ENST00000536301 GPR25O00155 361 aa6.97□□□□□ -1.29
CHD4-205ENST00000536301 ECE2O60344 883 aa6.97□□□□□ -1.29
CHD4-205ENST00000536301 BBOX1O75936 387 aa6.97□□□□□ -1.29
CHD4-205ENST00000536301 GPSM2P81274 684 aa6.97□□□□□ -1.29
CHD4-205ENST00000536301 GRAPQ13588 217 aa6.97□□□□□ -1.29
CHD4-205ENST00000536301 PPP1R42Q7Z4L9 355 aa6.97□□□□□ -1.29
CHD4-205ENST00000536301 GRAPLQ8TC17 118 aaPredicted RBP6.97□□□□□ -1.29
CHD4-205ENST00000536301 CELF1Q92879 486 aaKnown RBP6.97□□□□□ -1.29
CHD4-205ENST00000536301 DCPSQ96C86 337 aaKnown RBP6.97□□□□□ -1.29
CHD4-205ENST00000536301 UTP14AQ9BVJ6 771 aaKnown RBP6.97□□□□□ -1.29
CHD4-205ENST00000536301 HDAC9Q9UKV0 1011 aa6.97□□□□□ -1.29
CHD4-205ENST00000536301 PSME4Q14997 1843 aa6.97□□□□□ -1.29
CHD4-205ENST00000536301 U2AF1L5P0DN76 240 aaPredicted RBP6.96□□□□□ -1.3
CHD4-205ENST00000536301 U2AF1Q01081 240 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHD4-205ENST00000536301 CAP1Q01518 475 aa6.96□□□□□ -1.3
CHD4-205ENST00000536301 PARP10Q53GL7 1025 aa6.96□□□□□ -1.3
CHD4-205ENST00000536301 ANGEL2Q5VTE6 544 aaKnown RBP6.96□□□□□ -1.3
CHD4-205ENST00000536301 FBXO46Q6PJ61 603 aaPredicted RBP6.96□□□□□ -1.3
CHD4-205ENST00000536301 NLRP10Q86W26 655 aa6.96□□□□□ -1.3
CHD4-205ENST00000536301 TMX4Q9H1E5 349 aaPredicted RBP6.96□□□□□ -1.3
CHD4-205ENST00000536301 TIMELESSQ9UNS1 1208 aa6.96□□□□□ -1.3
CHD4-205ENST00000536301 RBBP6Q7Z6E9 1792 aaKnown RBP6.95□□□□□ -1.3
CHD4-205ENST00000536301 ZNF646O15015 1829 aaPredicted RBP6.95□□□□□ -1.3
CHD4-205ENST00000536301 SCARF1Q14162 830 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms