RNA–Protein interactions for RNA: ENST00000535561.5

SOD2-209, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-209ENST00000535561 TMEM57Q8N5G2 664 aa18.25■□□□□ 0.51
SOD2-209ENST00000535561 TTLL11Q8NHH1 800 aa18.25■□□□□ 0.51
SOD2-209ENST00000535561 DLEC1Q9Y238 1755 aa18.25■□□□□ 0.51
SOD2-209ENST00000535561 BBOX1O75936 387 aa18.24■□□□□ 0.51
SOD2-209ENST00000535561 RLBP1P12271 317 aa18.24■□□□□ 0.51
SOD2-209ENST00000535561 GRIPAP1Q4V328 841 aa18.24■□□□□ 0.51
SOD2-209ENST00000535561 JARID2Q92833 1246 aaPredicted RBP18.24■□□□□ 0.51
SOD2-209ENST00000535561 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
SOD2-209ENST00000535561 GRIN3BO60391 1043 aa18.23■□□□□ 0.51
SOD2-209ENST00000535561 RRP1P56182 461 aaKnown RBP18.23■□□□□ 0.51
SOD2-209ENST00000535561 FOXO4P98177 505 aa18.23■□□□□ 0.51
SOD2-209ENST00000535561 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
SOD2-209ENST00000535561 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
SOD2-209ENST00000535561 TNNQ9UQP3 1299 aa18.23■□□□□ 0.51
SOD2-209ENST00000535561 GRAPQ13588 217 aa18.22■□□□□ 0.51
SOD2-209ENST00000535561 RABL6Q3YEC7 729 aaPredicted RBP18.22■□□□□ 0.51
SOD2-209ENST00000535561 CC2D2BQ6DHV5 1058 aa18.22■□□□□ 0.51
SOD2-209ENST00000535561 GRAPLQ8TC17 118 aaPredicted RBP18.22■□□□□ 0.51
SOD2-209ENST00000535561 CDC5LQ99459 802 aaKnown RBP18.22■□□□□ 0.51
SOD2-209ENST00000535561 DDX19BQ9UMR2 479 aa18.22■□□□□ 0.51
SOD2-209ENST00000535561 COL11A2P13942 1736 aaPredicted RBP18.22■□□□□ 0.51
SOD2-209ENST00000535561 PLIN1O60240 522 aa18.21■□□□□ 0.51
SOD2-209ENST00000535561 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.51
SOD2-209ENST00000535561 GPR162Q16538 588 aa18.21■□□□□ 0.51
SOD2-209ENST00000535561 PANK1Q8TE04 598 aa18.21■□□□□ 0.51
SOD2-209ENST00000535561 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
SOD2-209ENST00000535561 MEIS3Q99687 375 aa18.21■□□□□ 0.51
SOD2-209ENST00000535561 BCS1LQ9Y276 419 aa18.21■□□□□ 0.51
SOD2-209ENST00000535561 LMBR1LQ6UX01 489 aa18.2■□□□□ 0.5
SOD2-209ENST00000535561 C7orf43Q8WVR3 580 aa18.2■□□□□ 0.5
SOD2-209ENST00000535561 KAZALD1Q96I82 304 aa18.2■□□□□ 0.5
SOD2-209ENST00000535561 TMX4Q9H1E5 349 aaPredicted RBP18.2■□□□□ 0.5
SOD2-209ENST00000535561 ZBTB7BO15156 539 aaPredicted RBP18.19■□□□□ 0.5
SOD2-209ENST00000535561 GNAI2P04899 355 aa18.19■□□□□ 0.5
SOD2-209ENST00000535561 BRCA1P38398 1863 aaKnown RBP18.19■□□□□ 0.5
SOD2-209ENST00000535561 RPS8P62241 208 aaKnown RBP18.19■□□□□ 0.5
SOD2-209ENST00000535561 IFIT5Q13325 482 aaKnown RBP18.19■□□□□ 0.5
SOD2-209ENST00000535561 BICC1Q9H694 974 aaKnown RBP18.19■□□□□ 0.5
SOD2-209ENST00000535561 GREM2Q9H772 168 aa18.19■□□□□ 0.5
SOD2-209ENST00000535561 PPEF1O14829 653 aaPredicted RBP18.18■□□□□ 0.5
SOD2-209ENST00000535561 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.57e-7■□□□□ 10.1
SOD2-209ENST00000535561 EPHA10Q5JZY3 1008 aa18.18■□□□□ 0.5
SOD2-209ENST00000535561 ANKRD44Q8N8A2 993 aa18.18■□□□□ 0.5
SOD2-209ENST00000535561 ATP6V0A2Q9Y487 856 aa18.18■□□□□ 0.5
SOD2-209ENST00000535561 ANKRD18BA2A2Z9 1011 aa18.17■□□□□ 0.5
SOD2-209ENST00000535561 ITGA6P23229 1130 aa18.17■□□□□ 0.5
SOD2-209ENST00000535561 MTX1Q13505 466 aa18.17■□□□□ 0.5
SOD2-209ENST00000535561 CCDC57Q2TAC2 916 aa18.17■□□□□ 0.5
SOD2-209ENST00000535561 FAM161AQ3B820 660 aa18.17■□□□□ 0.5
SOD2-209ENST00000535561 ANKRD18AQ8IVF6 992 aa18.17■□□□□ 0.5
SOD2-209ENST00000535561 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
SOD2-209ENST00000535561 RTKN2Q8IZC4 609 aa18.17■□□□□ 0.5
SOD2-209ENST00000535561 LRRFIP2Q9Y608 721 aaKnown RBP18.17■□□□□ 0.5
SOD2-209ENST00000535561 IGHMBP2P38935 993 aaKnown RBP18.16■□□□□ 0.5
SOD2-209ENST00000535561 CCDC93Q567U6 631 aa18.16■□□□□ 0.5
SOD2-209ENST00000535561 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
SOD2-209ENST00000535561 SEC31BQ9NQW1 1179 aa18.16■□□□□ 0.5
SOD2-209ENST00000535561 BSDC1Q9NW68 430 aaPredicted RBP18.16■□□□□ 0.5
SOD2-209ENST00000535561 C21orf2O43822 256 aa18.15■□□□□ 0.5
SOD2-209ENST00000535561 C20orf194Q5TEA3 1177 aa18.15■□□□□ 0.5
SOD2-209ENST00000535561 CELF1Q92879 486 aaKnown RBP18.15■□□□□ 0.5
SOD2-209ENST00000535561 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
SOD2-209ENST00000535561 CHMP3Q9Y3E7 222 aa18.15■□□□□ 0.5
SOD2-209ENST00000535561 LTBP3Q9NS15 1303 aa18.15■□□□□ 0.5
SOD2-209ENST00000535561 MYH3P11055 1940 aa18.14■□□□□ 0.49
SOD2-209ENST00000535561 AAMPQ13685 434 aa18.14■□□□□ 0.49
SOD2-209ENST00000535561 CCDC85AQ96PX6 553 aaPredicted RBP18.14■□□□□ 0.49
SOD2-209ENST00000535561 ZBTB40Q9NUA8 1239 aa18.14■□□□□ 0.49
SOD2-209ENST00000535561 ARFGEF1Q9Y6D6 1849 aa18.14■□□□□ 0.49
SOD2-209ENST00000535561 CENPBP07199 599 aaPredicted RBP18.13■□□□□ 0.49
SOD2-209ENST00000535561 PSMD1Q99460 953 aa18.13■□□□□ 0.49
SOD2-209ENST00000535561 MPHOSPH8Q99549 860 aa18.13■□□□□ 0.49
SOD2-209ENST00000535561 FBXO3Q9UK99 471 aa18.13■□□□□ 0.49
SOD2-209ENST00000535561 TAF7LQ5H9L4 462 aa18.12■□□□□ 0.49
SOD2-209ENST00000535561 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
SOD2-209ENST00000535561 SLX4Q8IY92 1834 aa18.12■□□□□ 0.49
SOD2-209ENST00000535561 ARHGAP27Q6ZUM4 889 aa18.11■□□□□ 0.49
SOD2-209ENST00000535561 RTFDC1Q9BY42 306 aaPredicted RBP18.11■□□□□ 0.49
SOD2-209ENST00000535561 VPS33BQ9H267 617 aa18.11■□□□□ 0.49
SOD2-209ENST00000535561 PODXL2Q9NZ53 605 aa18.11■□□□□ 0.49
SOD2-209ENST00000535561 SUPT16HQ9Y5B9 1047 aaKnown RBP18.11■□□□□ 0.49
SOD2-209ENST00000535561 SNED1Q8TER0 1413 aa18.11■□□□□ 0.49
SOD2-209ENST00000535561 FKBP4Q02790 459 aaKnown RBP eCLIP18.1■□□□□ 0.49
SOD2-209ENST00000535561 LDHAL6AQ6ZMR3 332 aa18.1■□□□□ 0.49
SOD2-209ENST00000535561 SUPT20HQ8NEM7 779 aa18.1■□□□□ 0.49
SOD2-209ENST00000535561 ANKRD2Q9GZV1 360 aa18.1■□□□□ 0.49
SOD2-209ENST00000535561 TAOK3Q9H2K8 898 aa18.1■□□□□ 0.49
SOD2-209ENST00000535561 GOLGB1Q14789 3259 aaKnown RBP18.09■□□□□ 0.49
SOD2-209ENST00000535561 SRGAP3O43295 1099 aa18.09■□□□□ 0.49
SOD2-209ENST00000535561 RFX5P48382 616 aaPredicted RBP18.09■□□□□ 0.49
SOD2-209ENST00000535561 DPP8Q6V1X1 898 aaPredicted RBP18.09■□□□□ 0.49
SOD2-209ENST00000535561 RPAP2Q8IXW5 612 aaPredicted RBP18.09■□□□□ 0.49
SOD2-209ENST00000535561 MPNDQ8N594 471 aa18.09■□□□□ 0.49
SOD2-209ENST00000535561 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
SOD2-209ENST00000535561 MINPP1Q9UNW1 487 aa18.09■□□□□ 0.49
SOD2-209ENST00000535561 XDHP47989 1333 aa18.08■□□□□ 0.49
SOD2-209ENST00000535561 NFKBIEO00221 500 aa18.08■□□□□ 0.48
SOD2-209ENST00000535561 CIAO1O76071 339 aa18.08■□□□□ 0.48
SOD2-209ENST00000535561 ATP8B2P98198 1209 aa18.08■□□□□ 0.48
SOD2-209ENST00000535561 COPRSQ9NQ92 184 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms