RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 NFKBIEO00221 500 aa27.67■■■□□ 2.02
SSPN-204ENST00000535504 FKBP4Q02790 459 aaKnown RBP eCLIP27.67■■■□□ 2.02
SSPN-204ENST00000535504 BEND3Q5T5X7 828 aa27.67■■■□□ 2.02
SSPN-204ENST00000535504 C7orf43Q8WVR3 580 aa27.67■■■□□ 2.02
SSPN-204ENST00000535504 KIF16BQ96L93 1317 aa27.67■■■□□ 2.02
SSPN-204ENST00000535504 UTRNP46939 3433 aa27.66■■■□□ 2.02
SSPN-204ENST00000535504 JARID2Q92833 1246 aaPredicted RBP27.66■■■□□ 2.02
SSPN-204ENST00000535504 FER1L6Q2WGJ9 1857 aa27.66■■■□□ 2.02
SSPN-204ENST00000535504 H7C1W4 665 aa27.65■■■□□ 2.02
SSPN-204ENST00000535504 API5Q9BZZ5 524 aaKnown RBP27.65■■■□□ 2.02
SSPN-204ENST00000535504 GPBP1L1Q9HC44 474 aaPredicted RBP27.65■■■□□ 2.02
SSPN-204ENST00000535504 ATP6V0A2Q9Y487 856 aa27.65■■■□□ 2.02
SSPN-204ENST00000535504 CTSWP56202 376 aa27.64■■■□□ 2.02
SSPN-204ENST00000535504 SUPT20HQ8NEM7 779 aa27.64■■■□□ 2.02
SSPN-204ENST00000535504 IPO8O15397 1037 aaKnown RBP27.63■■■□□ 2.01
SSPN-204ENST00000535504 RARSP54136 660 aaKnown RBP27.63■■■□□ 2.01
SSPN-204ENST00000535504 SP8Q8IXZ3 490 aa27.63■■■□□ 2.01
SSPN-204ENST00000535504 CDC5LQ99459 802 aaKnown RBP27.63■■■□□ 2.01
SSPN-204ENST00000535504 SBF1O95248 1867 aa27.62■■■□□ 2.01
SSPN-204ENST00000535504 ZNF526Q8TF50 670 aaPredicted RBP27.62■■■□□ 2.01
SSPN-204ENST00000535504 PSMD1Q99460 953 aa27.62■■■□□ 2.01
SSPN-204ENST00000535504 KDM2BQ8NHM5 1336 aa27.62■■■□□ 2.01
SSPN-204ENST00000535504 GRM8O00222 908 aa27.61■■■□□ 2.01
SSPN-204ENST00000535504 BRPF1P55201 1214 aaPredicted RBP27.61■■■□□ 2.01
SSPN-204ENST00000535504 CCDC85AQ96PX6 553 aaPredicted RBP27.61■■■□□ 2.01
SSPN-204ENST00000535504 RPS8P62241 208 aaKnown RBP27.6■■■□□ 2.01
SSPN-204ENST00000535504 DPY19L2Q6NUT2 758 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 DPP8Q6V1X1 898 aaPredicted RBP27.6■■■□□ 2.01
SSPN-204ENST00000535504 ANKRD18AQ8IVF6 992 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 MPNDQ8N594 471 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 PLA2G12BQ9BX93 195 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 NOB1Q9ULX3 412 aaKnown RBP27.6■■■□□ 2.01
SSPN-204ENST00000535504 MYH3P11055 1940 aa27.6■■■□□ 2.01
SSPN-204ENST00000535504 CCDC88AQ3V6T2 1871 aa27.59■■■□□ 2.01
SSPN-204ENST00000535504 OLFM4Q6UX06 510 aa27.59■■■□□ 2.01
SSPN-204ENST00000535504 JDP2Q8WYK2 163 aa27.59■■■□□ 2.01
SSPN-204ENST00000535504 IARSP41252 1262 aaKnown RBP27.58■■■□□ 2.01
SSPN-204ENST00000535504 CCT4P50991 539 aaKnown RBP27.58■■■□□ 2.01
SSPN-204ENST00000535504 ZNF277Q9NRM2 450 aaPredicted RBP27.58■■■□□ 2.01
SSPN-204ENST00000535504 CHMP3Q9Y3E7 222 aa27.58■■■□□ 2.01
SSPN-204ENST00000535504 TTLL11Q8NHH1 800 aa27.57■■■□□ 2
SSPN-204ENST00000535504 CELF1Q92879 486 aaKnown RBP27.57■■■□□ 2
SSPN-204ENST00000535504 IGHMBP2P38935 993 aaKnown RBP27.56■■■□□ 2
SSPN-204ENST00000535504 ARHGAP45Q92619 1136 aa27.56■■■□□ 2
SSPN-204ENST00000535504 HDAC5Q9UQL6 1122 aa27.56■■■□□ 2
SSPN-204ENST00000535504 VPS33BQ9H267 617 aa27.55■■■□□ 2
SSPN-204ENST00000535504 SEC31BQ9NQW1 1179 aa27.55■■■□□ 2
SSPN-204ENST00000535504 TIAM2Q8IVF5 1701 aa27.54■■■□□ 2
SSPN-204ENST00000535504 LARGE2Q8N3Y3 721 aa27.54■■■□□ 2
SSPN-204ENST00000535504 RTL9Q8NET4 1388 aa27.54■■■□□ 2
SSPN-204ENST00000535504 FRAT1Q92837 279 aaPredicted RBP27.54■■■□□ 2
SSPN-204ENST00000535504 NSFL1CQ9UNZ2 370 aaKnown RBP27.54■■■□□ 2
SSPN-204ENST00000535504 DICER1Q9UPY3 1922 aaKnown RBP27.54■■■□□ 2
SSPN-204ENST00000535504 ANKRD18BA2A2Z9 1011 aa27.53■■■□□ 2
SSPN-204ENST00000535504 PPIP5K2O43314 1243 aa27.53■■■□□ 2
SSPN-204ENST00000535504 CASP7P55210 303 aa27.53■■■□□ 2
SSPN-204ENST00000535504 MPHOSPH8Q99549 860 aa27.53■■■□□ 2
SSPN-204ENST00000535504 GREM2Q9H772 168 aa27.53■■■□□ 2
SSPN-204ENST00000535504 ANKIB1Q9P2G1 1089 aa27.53■■■□□ 2
SSPN-204ENST00000535504 IFIT5Q13325 482 aaKnown RBP27.52■■■□□ 2
SSPN-204ENST00000535504 TAF7LQ5H9L4 462 aa27.52■■■□□ 2
SSPN-204ENST00000535504 NIM1KQ8IY84 436 aa27.52■■■□□ 2
SSPN-204ENST00000535504 TAF1P21675 1872 aa27.51■■□□□ 1.99
SSPN-204ENST00000535504 ITGA6P23229 1130 aa27.51■■□□□ 1.99
SSPN-204ENST00000535504 EYA3Q99504 573 aa27.51■■□□□ 1.99
SSPN-204ENST00000535504 GLTPD2A6NH11 291 aa27.5■■□□□ 1.99
SSPN-204ENST00000535504 C6orf229H3BNL8 230 aa27.5■■□□□ 1.99
SSPN-204ENST00000535504 PRELPP51888 382 aa27.5■■□□□ 1.99
SSPN-204ENST00000535504 EIF6P56537 245 aaKnown RBP27.5■■□□□ 1.99
SSPN-204ENST00000535504 CCDC57Q2TAC2 916 aa27.5■■□□□ 1.99
SSPN-204ENST00000535504 C16orf71Q8IYS4 520 aaPredicted RBP27.5■■□□□ 1.99
SSPN-204ENST00000535504 CSF1RP07333 972 aa27.49■■□□□ 1.99
SSPN-204ENST00000535504 FAM161AQ3B820 660 aa27.49■■□□□ 1.99
SSPN-204ENST00000535504 RTFDC1Q9BY42 306 aaPredicted RBP27.49■■□□□ 1.99
SSPN-204ENST00000535504 BSDC1Q9NW68 430 aaPredicted RBP27.49■■□□□ 1.99
SSPN-204ENST00000535504 BCAR3O75815 825 aa27.48■■□□□ 1.99
SSPN-204ENST00000535504 ZKSCAN2Q63HK3 967 aa27.48■■□□□ 1.99
SSPN-204ENST00000535504 ATF7IPQ6VMQ6 1270 aa27.48■■□□□ 1.99
SSPN-204ENST00000535504 G3V3G9 751 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 DCAF8Q5TAQ9 597 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 LMBR1LQ6UX01 489 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 GGA1Q9UJY5 639 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 SNED1Q8TER0 1413 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 LRRC37AA6NMS7 1700 aa27.47■■□□□ 1.99
SSPN-204ENST00000535504 UTYO14607 1347 aa27.46■■□□□ 1.99
SSPN-204ENST00000535504 NBPF7P0C2Y1 421 aaPredicted RBP27.46■■□□□ 1.99
SSPN-204ENST00000535504 FTSJ3Q8IY81 847 aaKnown RBP27.46■■□□□ 1.99
SSPN-204ENST00000535504 XDHP47989 1333 aa27.45■■□□□ 1.99
SSPN-204ENST00000535504 UBTFL1P0CB47 393 aaPredicted RBP27.45■■□□□ 1.98
SSPN-204ENST00000535504 GPSM2P81274 684 aa27.45■■□□□ 1.98
SSPN-204ENST00000535504 FOXO4P98177 505 aa27.45■■□□□ 1.98
SSPN-204ENST00000535504 AOC3Q16853 763 aa27.45■■□□□ 1.98
SSPN-204ENST00000535504 WASHC4Q2M389 1173 aa27.45■■□□□ 1.98
SSPN-204ENST00000535504 UFL1O94874 794 aa27.44■■□□□ 1.98
SSPN-204ENST00000535504 SUCLG2Q96I99 432 aa27.44■■□□□ 1.98
SSPN-204ENST00000535504 ANKRD2Q9GZV1 360 aa27.44■■□□□ 1.98
SSPN-204ENST00000535504 ATP2B4P23634 1241 aa27.43■■□□□ 1.98
SSPN-204ENST00000535504 KIAA2012Q0VF49 1180 aa27.43■■□□□ 1.98
SSPN-204ENST00000535504 ZC3H12CQ9C0D7 883 aaKnown RBP27.43■■□□□ 1.98
SSPN-204ENST00000535504 PODXL2Q9NZ53 605 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms