RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 SUPT16HQ9Y5B9 1047 aaKnown RBP11□□□□□ -0.65
SFSWAP-202ENST00000535202 GJA3Q9Y6H8 435 aa11□□□□□ -0.65
SFSWAP-202ENST00000535202 LRRC37AA6NMS7 1700 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 IRS4O14654 1257 aaPredicted RBP10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 DDX58O95786 925 aaKnown RBP10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 EPHX2P34913 555 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 AOC3Q16853 763 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 DPP8Q6V1X1 898 aaPredicted RBP10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 LDHDQ86WU2 507 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 SP8Q8IXZ3 490 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 GPC2Q8N158 579 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 MPNDQ8N594 471 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 SUPT20HQ8NEM7 779 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 KLRG1Q96E93 195 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 CHMP4AQ9BY43 222 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 CEP350Q5VT06 3117 aa10.99□□□□□ -0.65
SFSWAP-202ENST00000535202 TRIM28Q13263 835 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-202ENST00000535202 TWISTNBQ3B726 338 aaPredicted RBP10.98□□□□□ -0.65
SFSWAP-202ENST00000535202 STK31Q9BXU1 1019 aa10.98□□□□□ -0.65
SFSWAP-202ENST00000535202 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
SFSWAP-202ENST00000535202 IL16Q14005 1332 aa10.98□□□□□ -0.65
SFSWAP-202ENST00000535202 COL4A1P02462 1669 aa10.98□□□□□ -0.65
SFSWAP-202ENST00000535202 LMOD1P29536 600 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 SF3B3Q15393 1217 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 TMC4Q7Z404 712 aa10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 ZBTB38Q8NAP3 1195 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 CCDC191Q8NCU4 936 aa10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 JARID2Q92833 1246 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 CELF1Q92879 486 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 METTL22Q9BUU2 404 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 RTFDC1Q9BY42 306 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 CWC25Q9NXE8 425 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 MAP3K2Q9Y2U5 619 aa10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 DUOX1Q9NRD9 1551 aa10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 LTBP1Q14766 1721 aa10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 ADAMTSL1Q8N6G6 1762 aa10.97□□□□□ -0.65
SFSWAP-202ENST00000535202 FANCIQ9NVI1 1328 aa10.96□□□□□ -0.65
SFSWAP-202ENST00000535202 NCBP3Q53F19 620 aaKnown RBP10.96□□□□□ -0.65
SFSWAP-202ENST00000535202 PNMA8AQ86V59 439 aaPredicted RBP10.96□□□□□ -0.65
SFSWAP-202ENST00000535202 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.65
SFSWAP-202ENST00000535202 VPS33BQ9H267 617 aa10.96□□□□□ -0.65
SFSWAP-202ENST00000535202 PI4KAP2A4QPH2 592 aa10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 PCCAP05165 728 aaPredicted RBP10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 HSP90B1P14625 803 aaKnown RBP10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 SCNN1DP51172 638 aa10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 KIAA2012Q0VF49 1180 aa10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 KSR2Q6VAB6 950 aa10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 PI4KAP1Q8N8J0 262 aa10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 ZNRF3Q9ULT6 936 aa10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 NSFL1CQ9UNZ2 370 aaKnown RBP10.95□□□□□ -0.66
SFSWAP-202ENST00000535202 MYH3P11055 1940 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 C6orf229H3BNL8 230 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 PDE8AO60658 829 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 SLC4A2P04920 1241 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 EPS15P42566 896 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 CXCL9Q07325 125 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 NEXNQ0ZGT2 675 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 CCDC152Q4G0S7 254 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 MAP1SQ66K74 1059 aaPredicted RBP10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 G2E3Q7L622 706 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 WDR63Q8IWG1 891 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 JMYQ8N9B5 988 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 SEC31BQ9NQW1 1179 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
SFSWAP-202ENST00000535202 SPEF2Q9C093 1822 aa10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 PASKQ96RG2 1323 aa10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 RAD17O75943 681 aa10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 IGKV5-2P06315 115 aa10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 RPS8P62241 208 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 GPSM2P81274 684 aa10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 EXOSC9Q06265 439 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 WASHC4Q2M389 1173 aa10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 CIAPIN1Q6FI81 312 aa10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 BCL2L13Q9BXK5 485 aa10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 MKRN1Q9UHC7 482 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-202ENST00000535202 CDHR2Q9BYE9 1310 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 YDJCA8MPS7 323 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 NEURL1BA8MQ27 555 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 ITGBL1O95965 494 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 GMPSP49915 693 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 FLIIQ13045 1269 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 FKBP5Q13451 457 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 CWF19L2Q2TBE0 894 aaKnown RBP10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 MIER1Q8N108 512 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 CNTROBQ8N137 903 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 GPR101Q96P66 508 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 EYA3Q99504 573 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 DBNDD1Q9H9R9 158 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 GPRC5DQ9NZD1 345 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 POLLQ9UGP5 575 aa10.92□□□□□ -0.66
SFSWAP-202ENST00000535202 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 VAMP4O75379 141 aa10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 UFL1O94874 794 aa10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 CTSWP56202 376 aa10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 TNIP1Q15025 636 aa10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 USP50Q70EL3 339 aaPredicted RBP10.91□□□□□ -0.66
SFSWAP-202ENST00000535202 ANKRD18AQ8IVF6 992 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms