RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-216	ENST00000534796	LMOD1	P29536	600 aa	Predicted RBP	13.88	□□□□□ -0.19
PTP4A2-216	ENST00000534796	CALD1	Q05682	793 aa	Known RBP	13.88	□□□□□ -0.19
PTP4A2-216	ENST00000534796	NLRP10	Q86W26	655 aa		13.88	□□□□□ -0.19
PTP4A2-216	ENST00000534796	CFAP44	Q96MT7	982 aa		13.88	□□□□□ -0.19
PTP4A2-216	ENST00000534796	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.88	□□□□□ -0.19
PTP4A2-216	ENST00000534796	DBF4	Q9UBU7	674 aa	Predicted RBP	13.88	□□□□□ -0.19
PTP4A2-216	ENST00000534796	TRMT112	Q9UI30	125 aa	Known RBP	13.88	□□□□□ -0.19
PTP4A2-216	ENST00000534796	PASK	Q96RG2	1323 aa		13.88	□□□□□ -0.19
PTP4A2-216	ENST00000534796	C3orf67	Q6ZVT6	689 aa		13.87	□□□□□ -0.19
PTP4A2-216	ENST00000534796	DDX46	Q7L014	1031 aa	Known RBP	13.87	□□□□□ -0.19
PTP4A2-216	ENST00000534796	NIM1K	Q8IY84	436 aa		13.87	□□□□□ -0.19
PTP4A2-216	ENST00000534796	PLBD2	Q8NHP8	589 aa		13.87	□□□□□ -0.19
PTP4A2-216	ENST00000534796	CHPF2	Q9P2E5	772 aa		13.87	□□□□□ -0.19
PTP4A2-216	ENST00000534796	GJA3	Q9Y6H8	435 aa		13.87	□□□□□ -0.19
PTP4A2-216	ENST00000534796	TCERG1	O14776	1098 aa	Known RBP	13.86	□□□□□ -0.19
PTP4A2-216	ENST00000534796	PPIP5K2	O43314	1243 aa		13.86	□□□□□ -0.19
PTP4A2-216	ENST00000534796	ANKRD13D	Q6ZTN6	518 aa		13.86	□□□□□ -0.19
PTP4A2-216	ENST00000534796	TMC4	Q7Z404	712 aa		13.86	□□□□□ -0.19
PTP4A2-216	ENST00000534796	CHMP4A	Q9BY43	222 aa		13.86	□□□□□ -0.19
PTP4A2-216	ENST00000534796	HYPK	Q9NX55	129 aa		13.86	□□□□□ -0.19
PTP4A2-216	ENST00000534796	ABCC4	O15439	1325 aa		13.86	□□□□□ -0.19
PTP4A2-216	ENST00000534796	TMEM88B	A6NKF7	163 aa		13.85	□□□□□ -0.19
PTP4A2-216	ENST00000534796	GABBR2	O75899	941 aa		13.85	□□□□□ -0.19
PTP4A2-216	ENST00000534796	HSPA1A	P0DMV8	641 aa	Known RBP	13.85	□□□□□ -0.19
PTP4A2-216	ENST00000534796	HSPA1B	P0DMV9	641 aa	Known RBP	13.85	□□□□□ -0.19
PTP4A2-216	ENST00000534796	KRT24	Q2M2I5	525 aa		13.85	□□□□□ -0.19
PTP4A2-216	ENST00000534796	DPP8	Q6V1X1	898 aa	Predicted RBP	13.85	□□□□□ -0.19
PTP4A2-216	ENST00000534796	SP8	Q8IXZ3	490 aa		13.85	□□□□□ -0.19
PTP4A2-216	ENST00000534796	PLCD3	Q8N3E9	789 aa		13.85	□□□□□ -0.19
PTP4A2-216	ENST00000534796	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.85	□□□□□ -0.19
PTP4A2-216	ENST00000534796	ITGBL1	O95965	494 aa	Predicted RBP	13.84	□□□□□ -0.19
PTP4A2-216	ENST00000534796	HCLS1	P14317	486 aa	Predicted RBP	13.84	□□□□□ -0.19
PTP4A2-216	ENST00000534796	GRAP	Q13588	217 aa		13.84	□□□□□ -0.19
PTP4A2-216	ENST00000534796	DUSP27	Q5VZP5	1158 aa		13.84	□□□□□ -0.19
PTP4A2-216	ENST00000534796	CNTROB	Q8N137	903 aa		13.84	□□□□□ -0.19
PTP4A2-216	ENST00000534796	MPND	Q8N594	471 aa		13.84	□□□□□ -0.19
PTP4A2-216	ENST00000534796	GRAPL	Q8TC17	118 aa	Predicted RBP	13.84	□□□□□ -0.19
PTP4A2-216	ENST00000534796	IFT57	Q9NWB7	429 aa		13.84	□□□□□ -0.19
PTP4A2-216	ENST00000534796	MKRN1	Q9UHC7	482 aa	Known RBP	13.84	□□□□□ -0.19
PTP4A2-216	ENST00000534796	CNTNAP1	P78357	1384 aa		13.83	□□□□□ -0.19
PTP4A2-216	ENST00000534796	HSP90B1	P14625	803 aa	Known RBP	13.83	□□□□□ -0.2
PTP4A2-216	ENST00000534796	GNAI1	P63096	354 aa		13.83	□□□□□ -0.2
PTP4A2-216	ENST00000534796	AOC3	Q16853	763 aa		13.83	□□□□□ -0.2
PTP4A2-216	ENST00000534796	USP50	Q70EL3	339 aa	Predicted RBP	13.83	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ZNF579	Q8NAF0	562 aa	Known RBP	13.83	□□□□□ -0.2
PTP4A2-216	ENST00000534796	MBIP	Q9NS73	344 aa		13.83	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ZNRF3	Q9ULT6	936 aa		13.83	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ZNF853	P0CG23	659 aa		13.82	□□□□□ -0.2
PTP4A2-216	ENST00000534796	SCNN1D	P51172	638 aa		13.82	□□□□□ -0.2
PTP4A2-216	ENST00000534796	GOLGA2	Q08379	1002 aa		13.82	□□□□□ -0.2
PTP4A2-216	ENST00000534796	TRIM28	Q13263	835 aa	Known RBP	13.82	□□□□□ -0.2
PTP4A2-216	ENST00000534796	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.82	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ISCA1	Q9BUE6	129 aa		13.82	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ANKRD36C	Q5JPF3	1778 aa		13.81	□□□□□ -0.2
PTP4A2-216	ENST00000534796	APAF1	O14727	1248 aa		13.81	□□□□□ -0.2
PTP4A2-216	ENST00000534796	KIAA2012	Q0VF49	1180 aa		13.81	□□□□□ -0.2
PTP4A2-216	ENST00000534796	MAP1S	Q66K74	1059 aa	Predicted RBP	13.81	□□□□□ -0.2
PTP4A2-216	ENST00000534796	CDHR2	Q9BYE9	1310 aa		13.81	□□□□□ -0.2
PTP4A2-216	ENST00000534796	COL4A5	P29400	1685 aa		13.81	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ADAMTSL1	Q8N6G6	1762 aa		13.81	□□□□□ -0.2
PTP4A2-216	ENST00000534796	EPS15	P42566	896 aa		13.8	□□□□□ -0.2
PTP4A2-216	ENST00000534796	TNIP1	Q15025	636 aa		13.8	□□□□□ -0.2
PTP4A2-216	ENST00000534796	SF3B3	Q15393	1217 aa	Known RBP	13.8	□□□□□ -0.2
PTP4A2-216	ENST00000534796	RIC3	Q7Z5B4	369 aa		13.8	□□□□□ -0.2
PTP4A2-216	ENST00000534796	TNS4	Q8IZW8	715 aa		13.8	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ADARB2	Q9NS39	739 aa	Known RBP	13.8	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ATP5J2-PTCD1	G3V325	749 aa		13.79	□□□□□ -0.2
PTP4A2-216	ENST00000534796	CLCN6	P51797	869 aa		13.79	□□□□□ -0.2
PTP4A2-216	ENST00000534796	CXCL9	Q07325	125 aa		13.79	□□□□□ -0.2
PTP4A2-216	ENST00000534796	CIAPIN1	Q6FI81	312 aa		13.79	□□□□□ -0.2
PTP4A2-216	ENST00000534796	AIDA	Q96BJ3	306 aa		13.79	□□□□□ -0.2
PTP4A2-216	ENST00000534796	FAM89A	Q96GI7	184 aa		13.79	□□□□□ -0.2
PTP4A2-216	ENST00000534796	GPRC5D	Q9NZD1	345 aa		13.79	□□□□□ -0.2
PTP4A2-216	ENST00000534796	PCNT	O95613	3336 aa		13.79	□□□□□ -0.2
PTP4A2-216	ENST00000534796	RASSF10	A6NK89	507 aa		13.78	□□□□□ -0.2
PTP4A2-216	ENST00000534796	IRS4	O14654	1257 aa	Predicted RBP	13.78	□□□□□ -0.2
PTP4A2-216	ENST00000534796	DDX58	O95786	925 aa	Known RBP	13.78	□□□□□ -0.2
PTP4A2-216	ENST00000534796	DEFB115	Q30KQ5	88 aa		13.78	□□□□□ -0.2
PTP4A2-216	ENST00000534796	SLC51A	Q86UW1	340 aa		13.78	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.78	□□□□□ -0.2
PTP4A2-216	ENST00000534796	ABT1	Q9ULW3	272 aa	Known RBP	13.78	□□□□□ -0.2
PTP4A2-216	ENST00000534796	VEGFB	P49765	207 aa		13.77	□□□□□ -0.21
PTP4A2-216	ENST00000534796	CCDC30	Q5VVM6	783 aa		13.77	□□□□□ -0.21
PTP4A2-216	ENST00000534796	BCL2L13	Q9BXK5	485 aa		13.77	□□□□□ -0.21
PTP4A2-216	ENST00000534796	ELL2	O00472	640 aa	Predicted RBP	13.76	□□□□□ -0.21
PTP4A2-216	ENST00000534796	GMPS	P49915	693 aa	Predicted RBP	13.76	□□□□□ -0.21
PTP4A2-216	ENST00000534796	WASHC4	Q2M389	1173 aa		13.76	□□□□□ -0.21
PTP4A2-216	ENST00000534796	CCDC191	Q8NCU4	936 aa		13.76	□□□□□ -0.21
PTP4A2-216	ENST00000534796	ZC3H15	Q8WU90	426 aa	Known RBP	13.76	□□□□□ -0.21
PTP4A2-216	ENST00000534796	EYA3	Q99504	573 aa		13.76	□□□□□ -0.21
PTP4A2-216	ENST00000534796	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.76	□□□□□ -0.21
PTP4A2-216	ENST00000534796	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.76	□□□□□ -0.21
PTP4A2-216	ENST00000534796	RAD17	O75943	681 aa		13.75	□□□□□ -0.21
PTP4A2-216	ENST00000534796	ECE1	P42892	770 aa		13.75	□□□□□ -0.21
PTP4A2-216	ENST00000534796	RPS8	P62241	208 aa	Known RBP	13.75	□□□□□ -0.21
PTP4A2-216	ENST00000534796	RTL5	Q5HYW3	569 aa	Predicted RBP	13.75	□□□□□ -0.21
PTP4A2-216	ENST00000534796	CELF1	Q92879	486 aa	Known RBP	13.75	□□□□□ -0.21
PTP4A2-216	ENST00000534796	PHAX	Q9H814	394 aa	Known RBP	13.75	□□□□□ -0.21
PTP4A2-216	ENST00000534796	LAMB2	P55268	1798 aa		13.74	□□□□□ -0.21
PTP4A2-216	ENST00000534796	LTBP1	Q14766	1721 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms