RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CNTNAP4Q9C0A0 1308 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 BMP7P18075 431 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 USP4Q13107 963 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 NR1H3Q13133 447 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 CIAPIN1Q6FI81 312 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 PPARGC1BQ86YN6 1023 aaKnown RBP2.51□□□□□ -2.01
COPB1-212ENST00000534771 CLEC10AQ8IUN9 316 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 SLC16A11Q8NCK7 471 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 GLIS3Q8NEA6 775 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 C1orf216Q8TAB5 229 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 RHBDD1Q8TEB9 315 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 UTP4Q969X6 686 aaKnown RBP2.51□□□□□ -2.01
COPB1-212ENST00000534771 MFSD14AQ96MC6 490 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 FHDC1Q9C0D6 1143 aaPredicted RBP2.51□□□□□ -2.01
COPB1-212ENST00000534771 SRRDQ9UH36 339 aa2.51□□□□□ -2.01
COPB1-212ENST00000534771 NFIBO00712 420 aa2.5□□□□□ -2.01
COPB1-212ENST00000534771 FSHBP01225 129 aa2.5□□□□□ -2.01
COPB1-212ENST00000534771 NEUROD1Q13562 356 aa2.5□□□□□ -2.01
COPB1-212ENST00000534771 GJD4Q96KN9 370 aaPredicted RBP2.5□□□□□ -2.01
COPB1-212ENST00000534771 SORCS2Q96PQ0 1159 aa2.5□□□□□ -2.01
COPB1-212ENST00000534771 FAM83CQ9BQN1 747 aa2.5□□□□□ -2.01
COPB1-212ENST00000534771 CDCA7Q9BWT1 371 aaPredicted RBP2.5□□□□□ -2.01
COPB1-212ENST00000534771 GPBP1L1Q9HC44 474 aaPredicted RBP2.5□□□□□ -2.01
COPB1-212ENST00000534771 CEP126Q9P2H0 1117 aa2.5□□□□□ -2.01
COPB1-212ENST00000534771 SLC6A14Q9UN76 642 aa2.5□□□□□ -2.01
COPB1-212ENST00000534771 KRT1P04264 644 aa2.49□□□□□ -2.01
COPB1-212ENST00000534771 CELA3BP08861 270 aa2.49□□□□□ -2.01
COPB1-212ENST00000534771 ZXDAP98168 799 aa2.49□□□□□ -2.01
COPB1-212ENST00000534771 SFSWAPQ12872 951 aaKnown RBP2.49□□□□□ -2.01
COPB1-212ENST00000534771 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
COPB1-212ENST00000534771 WFDC8Q8IUA0 241 aa2.49□□□□□ -2.01
COPB1-212ENST00000534771 SIRT1Q96EB6 747 aa2.49□□□□□ -2.01
COPB1-212ENST00000534771 PCMTD1Q96MG8 357 aaPredicted RBP2.49□□□□□ -2.01
COPB1-212ENST00000534771 NIFKQ9BYG3 293 aaKnown RBP2.49□□□□□ -2.01
COPB1-212ENST00000534771 UBE2OQ9C0C9 1292 aaKnown RBP2.49□□□□□ -2.01
COPB1-212ENST00000534771 KCNF1Q9H3M0 494 aa2.49□□□□□ -2.01
COPB1-212ENST00000534771 GOPCQ9HD26 462 aa2.49□□□□□ -2.01
COPB1-212ENST00000534771 SPEM2Q0P670 501 aa2.48□□□□□ -2.01
COPB1-212ENST00000534771 TSGA10IPQ3SY00 556 aa2.48□□□□□ -2.01
COPB1-212ENST00000534771 FBXL6Q8N531 539 aa2.48□□□□□ -2.01
COPB1-212ENST00000534771 GIMAP7Q8NHV1 300 aa2.48□□□□□ -2.01
COPB1-212ENST00000534771 CXorf38Q8TB03 319 aa2.48□□□□□ -2.01
COPB1-212ENST00000534771 CCDC85AQ96PX6 553 aaPredicted RBP2.48□□□□□ -2.01
COPB1-212ENST00000534771 OSBPL1AQ9BXW6 950 aa2.48□□□□□ -2.01
COPB1-212ENST00000534771 RC3H2Q9HBD1 1191 aaKnown RBP2.48□□□□□ -2.01
COPB1-212ENST00000534771 ETNK1Q9HBU6 452 aa2.48□□□□□ -2.01
COPB1-212ENST00000534771 INHAP05111 366 aa2.47□□□□□ -2.01
COPB1-212ENST00000534771 SMTNP53814 917 aa2.47□□□□□ -2.01
COPB1-212ENST00000534771 TLR1Q15399 786 aa2.47□□□□□ -2.01
COPB1-212ENST00000534771 KCNA10Q16322 511 aa2.47□□□□□ -2.01
COPB1-212ENST00000534771 CRB2Q5IJ48 1285 aa2.47□□□□□ -2.01
COPB1-212ENST00000534771 SAMD5Q5TGI4 173 aa2.47□□□□□ -2.01
COPB1-212ENST00000534771 BEND4Q6ZU67 534 aa2.47□□□□□ -2.01
COPB1-212ENST00000534771 BANK1Q8NDB2 785 aa2.47□□□□□ -2.01
COPB1-212ENST00000534771 MYRFQ9Y2G1 1151 aa2.47□□□□□ -2.01
COPB1-212ENST00000534771 ZNF503-AS2A6NEH8 195 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 CDK2AP1O14519 115 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 CYP26A1O43174 497 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 STAU1O95793 577 aaKnown RBP2.46□□□□□ -2.02
COPB1-212ENST00000534771 TATP17735 454 aaPredicted RBP2.46□□□□□ -2.02
COPB1-212ENST00000534771 GDF10P55107 478 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 NBPF1Q3BBV0 1214 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 SLFNL1Q499Z3 407 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 FAM20CQ8IXL6 584 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 PHTF2Q8N3S3 785 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 CEP41Q9BYV8 373 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 SLITRK6Q9H5Y7 841 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 DOLKQ9UPQ8 538 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 NDUFB9Q9Y6M9 179 aa2.46□□□□□ -2.02
COPB1-212ENST00000534771 APBB1O00213 710 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 NUAK1O60285 661 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 F13BP05160 661 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 BMP3P12645 472 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 EIF4G2P78344 907 aaKnown RBP eCLIP2.45□□□□□ -2.02
COPB1-212ENST00000534771 GRIK5Q16478 980 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 OXLD1Q5BKU9 147 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 ZNF574Q6ZN55 896 aaPredicted RBP2.45□□□□□ -2.02
COPB1-212ENST00000534771 BICDL1Q6ZP65 573 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 COL26A1Q96A83 441 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 LIN37Q96GY3 246 aaPredicted RBP2.45□□□□□ -2.02
COPB1-212ENST00000534771 MRIQ9BWK5 157 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 NEUROD4Q9HD90 331 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 ZDHHC3Q9NYG2 299 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 CABP1Q9NZU7 370 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 NAGPAQ9UK23 515 aa2.45□□□□□ -2.02
COPB1-212ENST00000534771 A6NJY4 79 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 GRIN3BO60391 1043 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 TMEM253P0C7T8 217 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 SCNN1DP51172 638 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 ATXN1P54253 815 aaKnown RBP2.44□□□□□ -2.02
COPB1-212ENST00000534771 MTFR1Q15390 333 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 MAP7D1Q3KQU3 841 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 CRTC2Q53ET0 693 aaPredicted RBP2.44□□□□□ -2.02
COPB1-212ENST00000534771 IL27Q8NEV9 243 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 BHMTQ93088 406 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 FAM46AQ96IP4 442 aaKnown RBP2.44□□□□□ -2.02
COPB1-212ENST00000534771 GPR20Q99678 358 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 IRF2BPLQ9H1B7 796 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms