RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
CAPN1-227ENST00000533909 ZNF277Q9NRM2 450 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-227ENST00000533909 ATP6V0A2Q9Y487 856 aa16.98■□□□□ 0.31
CAPN1-227ENST00000533909 DDX60Q8IY21 1712 aaKnown RBP16.98■□□□□ 0.31
CAPN1-227ENST00000533909 CDHR2Q9BYE9 1310 aa16.97■□□□□ 0.31
CAPN1-227ENST00000533909 FER1L6Q2WGJ9 1857 aa16.97■□□□□ 0.31
CAPN1-227ENST00000533909 CCDC85AQ96PX6 553 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-227ENST00000533909 LAMB2P55268 1798 aa16.97■□□□□ 0.31
CAPN1-227ENST00000533909 SBF1O95248 1867 aa16.97■□□□□ 0.31
CAPN1-227ENST00000533909 PTPRCP08575 1304 aa16.96■□□□□ 0.31
CAPN1-227ENST00000533909 DPY19L2Q6NUT2 758 aa16.96■□□□□ 0.31
CAPN1-227ENST00000533909 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
CAPN1-227ENST00000533909 PSMD1Q99460 953 aa16.96■□□□□ 0.31
CAPN1-227ENST00000533909 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
CAPN1-227ENST00000533909 C9orf78Q9NZ63 289 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-227ENST00000533909 PRELPP51888 382 aa16.95■□□□□ 0.3
CAPN1-227ENST00000533909 CTSWP56202 376 aa16.95■□□□□ 0.3
CAPN1-227ENST00000533909 BEND3Q5T5X7 828 aa16.95■□□□□ 0.3
CAPN1-227ENST00000533909 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-227ENST00000533909 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
CAPN1-227ENST00000533909 H7C1W4 665 aa16.94■□□□□ 0.3
CAPN1-227ENST00000533909 IARSP41252 1262 aaKnown RBP16.94■□□□□ 0.3
CAPN1-227ENST00000533909 RPS8P62241 208 aaKnown RBP16.94■□□□□ 0.3
CAPN1-227ENST00000533909 MPNDQ8N594 471 aa16.94■□□□□ 0.3
CAPN1-227ENST00000533909 SUPT20HQ8NEM7 779 aa16.94■□□□□ 0.3
CAPN1-227ENST00000533909 CCDC88AQ3V6T2 1871 aa16.93■□□□□ 0.3
CAPN1-227ENST00000533909 ALDH1L1O75891 902 aa16.93■□□□□ 0.3
CAPN1-227ENST00000533909 C16orf71Q8IYS4 520 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-227ENST00000533909 LARGE2Q8N3Y3 721 aa16.93■□□□□ 0.3
CAPN1-227ENST00000533909 CELF1Q92879 486 aaKnown RBP16.93■□□□□ 0.3
CAPN1-227ENST00000533909 CDC5LQ99459 802 aaKnown RBP16.93■□□□□ 0.3
CAPN1-227ENST00000533909 ZBED9Q6R2W3 1325 aa16.93■□□□□ 0.3
CAPN1-227ENST00000533909 TIAM2Q8IVF5 1701 aa16.93■□□□□ 0.3
CAPN1-227ENST00000533909 ANKRD18AQ8IVF6 992 aa16.92■□□□□ 0.3
CAPN1-227ENST00000533909 SEC31BQ9NQW1 1179 aa16.92■□□□□ 0.3
CAPN1-227ENST00000533909 GLTPD2A6NH11 291 aa16.91■□□□□ 0.3
CAPN1-227ENST00000533909 GRM8O00222 908 aa16.91■□□□□ 0.3
CAPN1-227ENST00000533909 PPIP5K2O43314 1243 aa16.91■□□□□ 0.3
CAPN1-227ENST00000533909 TTLL11Q8NHH1 800 aa16.91■□□□□ 0.3
CAPN1-227ENST00000533909 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
CAPN1-227ENST00000533909 CHMP3Q9Y3E7 222 aa16.91■□□□□ 0.3
CAPN1-227ENST00000533909 KIF16BQ96L93 1317 aa16.91■□□□□ 0.3
CAPN1-227ENST00000533909 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
CAPN1-227ENST00000533909 NIM1KQ8IY84 436 aa16.9■□□□□ 0.3
CAPN1-227ENST00000533909 PLA2G12BQ9BX93 195 aa16.9■□□□□ 0.3
CAPN1-227ENST00000533909 API5Q9BZZ5 524 aaKnown RBP16.9■□□□□ 0.3
CAPN1-227ENST00000533909 NMRK2Q9NPI5 230 aa16.9■□□□□ 0.3
CAPN1-227ENST00000533909 ANKIB1Q9P2G1 1089 aa16.9■□□□□ 0.3
CAPN1-227ENST00000533909 NOB1Q9ULX3 412 aaKnown RBP16.9■□□□□ 0.3
CAPN1-227ENST00000533909 TAF1P21675 1872 aa16.89■□□□□ 0.29
CAPN1-227ENST00000533909 C6orf229H3BNL8 230 aa16.89■□□□□ 0.29
CAPN1-227ENST00000533909 IGHMBP2P38935 993 aaKnown RBP16.89■□□□□ 0.29
CAPN1-227ENST00000533909 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
CAPN1-227ENST00000533909 EIF6P56537 245 aaKnown RBP16.89■□□□□ 0.29
CAPN1-227ENST00000533909 GREM2Q9H772 168 aa16.89■□□□□ 0.29
CAPN1-227ENST00000533909 RRAGCQ9HB90 399 aa16.89■□□□□ 0.29
CAPN1-227ENST00000533909 DICER1Q9UPY3 1922 aaKnown RBP16.88■□□□□ 0.29
CAPN1-227ENST00000533909 IPO8O15397 1037 aaKnown RBP16.88■□□□□ 0.29
CAPN1-227ENST00000533909 AOC3Q16853 763 aa16.88■□□□□ 0.29
CAPN1-227ENST00000533909 VPS33BQ9H267 617 aa16.88■□□□□ 0.29
CAPN1-227ENST00000533909 MYH3P11055 1940 aa16.88■□□□□ 0.29
CAPN1-227ENST00000533909 RTL9Q8NET4 1388 aa16.88■□□□□ 0.29
CAPN1-227ENST00000533909 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
CAPN1-227ENST00000533909 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
CAPN1-227ENST00000533909 ITGA6P23229 1130 aa16.87■□□□□ 0.29
CAPN1-227ENST00000533909 CCT4P50991 539 aaKnown RBP16.87■□□□□ 0.29
CAPN1-227ENST00000533909 CASP7P55210 303 aa16.87■□□□□ 0.29
CAPN1-227ENST00000533909 GPSM2P81274 684 aa16.87■□□□□ 0.29
CAPN1-227ENST00000533909 IFIT5Q13325 482 aaKnown RBP16.87■□□□□ 0.29
CAPN1-227ENST00000533909 FAM161AQ3B820 660 aa16.87■□□□□ 0.29
CAPN1-227ENST00000533909 TAF7LQ5H9L4 462 aa16.87■□□□□ 0.29
CAPN1-227ENST00000533909 FRAT1Q92837 279 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-227ENST00000533909 EYA3Q99504 573 aa16.87■□□□□ 0.29
CAPN1-227ENST00000533909 MPHOSPH8Q99549 860 aa16.87■□□□□ 0.29
CAPN1-227ENST00000533909 RTFDC1Q9BY42 306 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-227ENST00000533909 G3V3G9 751 aa16.86■□□□□ 0.29
CAPN1-227ENST00000533909 VEGFAP15692 232 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-227ENST00000533909 C1QTNF8P60827 252 aa16.86■□□□□ 0.29
CAPN1-227ENST00000533909 WASHC4Q2M389 1173 aa16.86■□□□□ 0.29
CAPN1-227ENST00000533909 DCAF8Q5TAQ9 597 aa16.86■□□□□ 0.29
CAPN1-227ENST00000533909 KIF3CO14782 793 aa16.85■□□□□ 0.29
CAPN1-227ENST00000533909 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-227ENST00000533909 UFL1O94874 794 aa16.85■□□□□ 0.29
CAPN1-227ENST00000533909 BRPF1P55201 1214 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-227ENST00000533909 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
CAPN1-227ENST00000533909 LMBR1LQ6UX01 489 aa16.85■□□□□ 0.29
CAPN1-227ENST00000533909 BSDC1Q9NW68 430 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-227ENST00000533909 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
CAPN1-227ENST00000533909 GJA3Q9Y6H8 435 aa16.85■□□□□ 0.29
CAPN1-227ENST00000533909 IQCA1LA6NCM1 817 aa16.84■□□□□ 0.29
CAPN1-227ENST00000533909 FZD9O00144 591 aa16.84■□□□□ 0.29
CAPN1-227ENST00000533909 RIMBP2O15034 1052 aa16.84■□□□□ 0.29
CAPN1-227ENST00000533909 CSF1RP07333 972 aa16.84■□□□□ 0.29
CAPN1-227ENST00000533909 KIAA2012Q0VF49 1180 aa16.84■□□□□ 0.29
CAPN1-227ENST00000533909 ZC3H12CQ9C0D7 883 aaKnown RBP16.84■□□□□ 0.29
CAPN1-227ENST00000533909 ZNRF3Q9ULT6 936 aa16.84■□□□□ 0.29
CAPN1-227ENST00000533909 XDHP47989 1333 aa16.84■□□□□ 0.29
CAPN1-227ENST00000533909 ZNF541Q9H0D2 1346 aa16.84■□□□□ 0.29
CAPN1-227ENST00000533909 LRRC37AA6NMS7 1700 aa16.84■□□□□ 0.29
CAPN1-227ENST00000533909 TOMM70O94826 608 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms