RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 FLT4P35916 1363 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 TOP1P11387 765 aaKnown RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 MTIF2P46199 727 aaKnown RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 BMP2KLQ5H9B9 411 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 TMTC2Q8N394 836 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 IRS4O14654 1257 aaPredicted RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 ERMNQ8TAM6 284 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 DCAF5Q96JK2 942 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 MEIS3Q99687 375 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 LRRC27Q9C0I9 530 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 CNNM2Q9H8M5 875 aa7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 CCNL1Q9UK58 526 aaPredicted RBP7.36□□□□□ -1.23
UBQLN1-206ENST00000533705 GJB2P29033 226 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 GNAQP50148 359 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 MAP3K9P80192 1104 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 IFIT1BQ5T764 474 aaKnown RBP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 SLC9C2Q5TAH2 1124 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 PUF60Q9UHX1 559 aaKnown RBP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 ATP10BO94823 1461 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 ZSCAN12O43309 604 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 TBCAO75347 108 aaKnown RBP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 FAM193AP78312 1265 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 RALGAPBQ86X10 1494 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 KLF18A0A0U1RQI7 1052 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 PRKCSHP14314 528 aaPredicted RBP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 TTC22Q5TAA0 569 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 TBC1D9Q6ZT07 1266 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 LINS1Q8NG48 757 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 CTNNBL1Q8WYA6 563 aaPredicted RBP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 JAG2Q9Y219 1238 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 ZBTB43O43298 467 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 MTHFSDQ2M296 383 aaKnown RBP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 TAF3Q5VWG9 929 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 TTC16Q8NEE8 873 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 ZNF408Q9H9D4 720 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 DDX19AQ9NUU7 478 aaKnown RBP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 TFIP11Q9UBB9 837 aaKnown RBP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 DUOX2Q9NRD8 1548 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 KAT6BQ8WYB5 2073 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 BRF1Q92994 677 aa7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 NUP88Q99567 741 aaPredicted RBP7.35□□□□□ -1.23
UBQLN1-206ENST00000533705 THOC2Q8NI27 1593 aaKnown RBP7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 USO1O60763 962 aaKnown RBP7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 YEATS4O95619 227 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 TNNT1P13805 278 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 PLCG2P16885 1265 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 SMARCC2Q8TAQ2 1214 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 PRC1O43663 620 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 KIF5CO60282 957 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 DNA2P51530 1060 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 CCDC174Q6PII3 467 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 HEATR3Q7Z4Q2 680 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 CNBD1Q8NA66 436 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 RBM17Q96I25 401 aaKnown RBP7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 PCDH11XQ9BZA7 1347 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 PCDH11YQ9BZA8 1340 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 MAGEB6P1A0A0J9YX57 407 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 B4DLN1 442 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 STX6O43752 255 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 CTNNA2P26232 953 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 MRPL12P52815 198 aaKnown RBP7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 KANK3Q6NY19 840 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 ANKRD2Q9GZV1 360 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 POLKQ9UBT6 870 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 GOLGA6L7A0A1B0GV03 622 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 FAM98CQ17RN3 349 aaKnown RBP7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 FAM114A1Q8IWE2 563 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 CPLX3Q8WVH0 158 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 CDCA7Q9BWT1 371 aaPredicted RBP7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 MCM9Q9NXL9 1143 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 ZMYM3Q14202 1370 aa7.34□□□□□ -1.23
UBQLN1-206ENST00000533705 KIF2AO00139 706 aaPredicted RBP7.34□□□□□ -1.24
UBQLN1-206ENST00000533705 RTN1Q16799 776 aa7.34□□□□□ -1.24
UBQLN1-206ENST00000533705 MCMDC2Q4G0Z9 681 aa7.34□□□□□ -1.24
UBQLN1-206ENST00000533705 UBXN4Q92575 508 aa7.34□□□□□ -1.24
UBQLN1-206ENST00000533705 GSTTP1A0A1W2PQM5 241 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 TNNI2P48788 182 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 RBM25P49756 843 aaKnown RBP7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 ATP8B2P98198 1209 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 CCDC102BQ68D86 513 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 C8orf58Q8NAV2 365 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 BIN1O00499 593 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 KIAA0754O94854 1291 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 BMP15O95972 392 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 LDHBP07195 334 aaKnown RBP7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 MMRN2Q9H8L6 949 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 TBX22Q9Y458 520 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 KIF4BQ2VIQ3 1234 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 LUZP1Q86V48 1076 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 MIGA1Q8NAN2 632 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 SSFA2P28290 1259 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 HOOK3Q86VS8 718 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 TCHPQ9BT92 498 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 LRRC2Q9BYS8 371 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 PA2G4Q9UQ80 394 aaKnown RBP7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 NPATQ14207 1427 aa7.33□□□□□ -1.24
UBQLN1-206ENST00000533705 NAPAP54920 295 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 SKAP1Q86WV1 359 aa7.32□□□□□ -1.24
UBQLN1-206ENST00000533705 ABCC10Q5T3U5 1492 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms