RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 COL4A1P02462 1669 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 DUOX1Q9NRD9 1551 aa14.64□□□□□ -0.07
CLCF1-202ENST00000533438 FOXN1O15353 648 aa14.63□□□□□ -0.07
CLCF1-202ENST00000533438 ANP32CO43423 234 aa14.63□□□□□ -0.07
CLCF1-202ENST00000533438 EPHX2P34913 555 aa14.63□□□□□ -0.07
CLCF1-202ENST00000533438 EIF6P56537 245 aaKnown RBP14.63□□□□□ -0.07
CLCF1-202ENST00000533438 DDX46Q7L014 1031 aaKnown RBP14.63□□□□□ -0.07
CLCF1-202ENST00000533438 FAM89AQ96GI7 184 aa14.63□□□□□ -0.07
CLCF1-202ENST00000533438 MKRN1Q9UHC7 482 aaKnown RBP14.63□□□□□ -0.07
CLCF1-202ENST00000533438 TMEM88BA6NKF7 163 aa14.62□□□□□ -0.07
CLCF1-202ENST00000533438 PPIP5K2O43314 1243 aa14.62□□□□□ -0.07
CLCF1-202ENST00000533438 SF3B3Q15393 1217 aaKnown RBP14.62□□□□□ -0.07
CLCF1-202ENST00000533438 AOC3Q16853 763 aa14.62□□□□□ -0.07
CLCF1-202ENST00000533438 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
CLCF1-202ENST00000533438 RIC3Q7Z5B4 369 aa14.62□□□□□ -0.07
CLCF1-202ENST00000533438 TSPYL6Q8N831 410 aa14.62□□□□□ -0.07
CLCF1-202ENST00000533438 SUPT20HQ8NEM7 779 aa14.62□□□□□ -0.07
CLCF1-202ENST00000533438 TMX4Q9H1E5 349 aaPredicted RBP14.62□□□□□ -0.07
CLCF1-202ENST00000533438 RASSF10A6NK89 507 aa14.61□□□□□ -0.07
CLCF1-202ENST00000533438 VEGFBP49765 207 aa14.61□□□□□ -0.07
CLCF1-202ENST00000533438 GOLGA2Q08379 1002 aa14.61□□□□□ -0.07
CLCF1-202ENST00000533438 TMC4Q7Z404 712 aa14.61□□□□□ -0.07
CLCF1-202ENST00000533438 PNMA8AQ86V59 439 aaPredicted RBP14.61□□□□□ -0.07
CLCF1-202ENST00000533438 WWC1Q8IX03 1113 aa14.61□□□□□ -0.07
CLCF1-202ENST00000533438 CTCFP49711 727 aaPredicted RBP14.6□□□□□ -0.07
CLCF1-202ENST00000533438 SCNN1DP51172 638 aa14.6□□□□□ -0.07
CLCF1-202ENST00000533438 EAPPQ56P03 285 aaPredicted RBP14.6□□□□□ -0.07
CLCF1-202ENST00000533438 CCDC30Q5VVM6 783 aa14.6□□□□□ -0.07
CLCF1-202ENST00000533438 DPP8Q6V1X1 898 aaPredicted RBP14.6□□□□□ -0.07
CLCF1-202ENST00000533438 NIM1KQ8IY84 436 aa14.6□□□□□ -0.07
CLCF1-202ENST00000533438 MPNDQ8N594 471 aa14.6□□□□□ -0.07
CLCF1-202ENST00000533438 ZBTB38Q8NAP3 1195 aaPredicted RBP14.6□□□□□ -0.07
CLCF1-202ENST00000533438 TSR2Q969E8 191 aaKnown RBP14.6□□□□□ -0.07
CLCF1-202ENST00000533438 CHMP4AQ9BY43 222 aa14.6□□□□□ -0.07
CLCF1-202ENST00000533438 GJA3Q9Y6H8 435 aa14.6□□□□□ -0.07
CLCF1-202ENST00000533438 IRS4O14654 1257 aaPredicted RBP14.59□□□□□ -0.07
CLCF1-202ENST00000533438 KIAA2012Q0VF49 1180 aa14.59□□□□□ -0.07
CLCF1-202ENST00000533438 RTL5Q5HYW3 569 aaPredicted RBP14.59□□□□□ -0.07
CLCF1-202ENST00000533438 CELF1Q92879 486 aaKnown RBP14.59□□□□□ -0.07
CLCF1-202ENST00000533438 MYD88Q99836 296 aa14.59□□□□□ -0.07
CLCF1-202ENST00000533438 MRS2Q9HD23 443 aa14.59□□□□□ -0.07
CLCF1-202ENST00000533438 CACNA1FO60840 1977 aa14.59□□□□□ -0.07
CLCF1-202ENST00000533438 IL16Q14005 1332 aa14.59□□□□□ -0.07
CLCF1-202ENST00000533438 MYH3P11055 1940 aa14.58□□□□□ -0.07
CLCF1-202ENST00000533438 CCDC191Q8NCU4 936 aa14.58□□□□□ -0.08
CLCF1-202ENST00000533438 METTL22Q9BUU2 404 aaPredicted RBP14.58□□□□□ -0.08
CLCF1-202ENST00000533438 ZNRF3Q9ULT6 936 aa14.58□□□□□ -0.08
CLCF1-202ENST00000533438 DDX58O95786 925 aaKnown RBP14.57□□□□□ -0.08
CLCF1-202ENST00000533438 PCCAP05165 728 aaPredicted RBP14.57□□□□□ -0.08
CLCF1-202ENST00000533438 LMOD1P29536 600 aaPredicted RBP14.57□□□□□ -0.08
CLCF1-202ENST00000533438 EPS15P42566 896 aa14.57□□□□□ -0.08
CLCF1-202ENST00000533438 CXCL9Q07325 125 aa14.57□□□□□ -0.08
CLCF1-202ENST00000533438 DEFB115Q30KQ5 88 aa14.57□□□□□ -0.08
CLCF1-202ENST00000533438 MIER1Q8N108 512 aa14.57□□□□□ -0.08
CLCF1-202ENST00000533438 CNTROBQ8N137 903 aa14.57□□□□□ -0.08
CLCF1-202ENST00000533438 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
CLCF1-202ENST00000533438 TWISTNBQ3B726 338 aaPredicted RBP14.56□□□□□ -0.08
CLCF1-202ENST00000533438 MAP1SQ66K74 1059 aaPredicted RBP14.56□□□□□ -0.08
CLCF1-202ENST00000533438 CWC25Q9NXE8 425 aaPredicted RBP14.56□□□□□ -0.08
CLCF1-202ENST00000533438 TRPM7Q96QT4 1865 aa14.56□□□□□ -0.08
CLCF1-202ENST00000533438 YDJCA8MPS7 323 aa14.55□□□□□ -0.08
CLCF1-202ENST00000533438 KSR2Q6VAB6 950 aa14.55□□□□□ -0.08
CLCF1-202ENST00000533438 USP50Q70EL3 339 aaPredicted RBP14.55□□□□□ -0.08
CLCF1-202ENST00000533438 GPRC5DQ9NZD1 345 aa14.55□□□□□ -0.08
CLCF1-202ENST00000533438 MAP3K2Q9Y2U5 619 aa14.55□□□□□ -0.08
CLCF1-202ENST00000533438 PI4KAP2A4QPH2 592 aa14.54□□□□□ -0.08
CLCF1-202ENST00000533438 PDE8AO60658 829 aa14.54□□□□□ -0.08
CLCF1-202ENST00000533438 IGKV5-2P06315 115 aa14.54□□□□□ -0.08
CLCF1-202ENST00000533438 HSP90B1P14625 803 aaKnown RBP14.54□□□□□ -0.08
CLCF1-202ENST00000533438 RPS8P62241 208 aaKnown RBP14.54□□□□□ -0.08
CLCF1-202ENST00000533438 MAP2K1Q02750 393 aaPredicted RBP14.54□□□□□ -0.08
CLCF1-202ENST00000533438 CIAPIN1Q6FI81 312 aa14.54□□□□□ -0.08
CLCF1-202ENST00000533438 PI4KAP1Q8N8J0 262 aa14.54□□□□□ -0.08
CLCF1-202ENST00000533438 STK31Q9BXU1 1019 aa14.54□□□□□ -0.08
CLCF1-202ENST00000533438 SEC31BQ9NQW1 1179 aa14.54□□□□□ -0.08
CLCF1-202ENST00000533438 POLLQ9UGP5 575 aa14.54□□□□□ -0.08
CLCF1-202ENST00000533438 CDHR2Q9BYE9 1310 aa14.54□□□□□ -0.08
CLCF1-202ENST00000533438 SPEF2Q9C093 1822 aa14.53□□□□□ -0.08
CLCF1-202ENST00000533438 WDR33Q9C0J8 1336 aaKnown RBP14.53□□□□□ -0.08
CLCF1-202ENST00000533438 FANCIQ9NVI1 1328 aa14.53□□□□□ -0.08
CLCF1-202ENST00000533438 GPSM2P81274 684 aa14.53□□□□□ -0.08
CLCF1-202ENST00000533438 WASHC4Q2M389 1173 aa14.53□□□□□ -0.08
CLCF1-202ENST00000533438 G2E3Q7L622 706 aa14.53□□□□□ -0.08
CLCF1-202ENST00000533438 WDR63Q8IWG1 891 aa14.53□□□□□ -0.08
CLCF1-202ENST00000533438 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
CLCF1-202ENST00000533438 ADARB2Q9NS39 739 aaKnown RBP14.53□□□□□ -0.08
CLCF1-202ENST00000533438 NSFL1CQ9UNZ2 370 aaKnown RBP14.53□□□□□ -0.08
CLCF1-202ENST00000533438 SCN9AQ15858 1988 aa14.53□□□□□ -0.08
CLCF1-202ENST00000533438 PSME4Q14997 1843 aa14.52□□□□□ -0.08
CLCF1-202ENST00000533438 CCER2I3L3R5 266 aa14.52□□□□□ -0.09
CLCF1-202ENST00000533438 RAD17O75943 681 aa14.52□□□□□ -0.09
CLCF1-202ENST00000533438 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
CLCF1-202ENST00000533438 HSPA8P11142 646 aaKnown RBP14.52□□□□□ -0.09
CLCF1-202ENST00000533438 RGS19P49795 217 aa14.52□□□□□ -0.09
CLCF1-202ENST00000533438 GMPSP49915 693 aaPredicted RBP14.52□□□□□ -0.09
CLCF1-202ENST00000533438 LBX1P52954 281 aa14.52□□□□□ -0.09
CLCF1-202ENST00000533438 TNIP1Q15025 636 aa14.52□□□□□ -0.09
CLCF1-202ENST00000533438 CCDC152Q4G0S7 254 aa14.52□□□□□ -0.09
CLCF1-202ENST00000533438 JARID2Q92833 1246 aaPredicted RBP14.52□□□□□ -0.09
CLCF1-202ENST00000533438 PODXL2Q9NZ53 605 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms