RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 CTSWP56202 376 aa28.04■■■□□ 2.08
LRRK1-208ENST00000532029 RLBP1P12271 317 aa28.03■■■□□ 2.08
LRRK1-208ENST00000532029 ITPRIPQ8IWB1 547 aa28.03■■■□□ 2.08
LRRK1-208ENST00000532029 PANK1Q8TE04 598 aa28.03■■■□□ 2.08
LRRK1-208ENST00000532029 CRAMP1Q96RY5 1269 aa28.03■■■□□ 2.08
LRRK1-208ENST00000532029 BRCA1P38398 1863 aaKnown RBP28.02■■■□□ 2.08
LRRK1-208ENST00000532029 UBTFL1P0CB47 393 aaPredicted RBP28.02■■■□□ 2.08
LRRK1-208ENST00000532029 SUCLG2Q96I99 432 aa28.02■■■□□ 2.08
LRRK1-208ENST00000532029 CCDC85AQ96PX6 553 aaPredicted RBP28.02■■■□□ 2.08
LRRK1-208ENST00000532029 HDAC5Q9UQL6 1122 aa28.02■■■□□ 2.08
LRRK1-208ENST00000532029 PRPF40BQ6NWY9 871 aaKnown RBP28.01■■■□□ 2.07
LRRK1-208ENST00000532029 GNAI3P08754 354 aa28■■■□□ 2.07
LRRK1-208ENST00000532029 TTLL11Q8NHH1 800 aa28■■■□□ 2.07
LRRK1-208ENST00000532029 RRP1P56182 461 aaKnown RBP27.99■■■□□ 2.07
LRRK1-208ENST00000532029 MEIS3Q99687 375 aa27.99■■■□□ 2.07
LRRK1-208ENST00000532029 YBX3P16989 372 aaKnown RBP eCLIP27.98■■■□□ 2.07
LRRK1-208ENST00000532029 FOXO4P98177 505 aa27.98■■■□□ 2.07
LRRK1-208ENST00000532029 GRAPQ13588 217 aa27.98■■■□□ 2.07
LRRK1-208ENST00000532029 PDE3AQ14432 1141 aa27.98■■■□□ 2.07
LRRK1-208ENST00000532029 GRAPLQ8TC17 118 aaPredicted RBP27.98■■■□□ 2.07
LRRK1-208ENST00000532029 CHMP3Q9Y3E7 222 aa27.98■■■□□ 2.07
LRRK1-208ENST00000532029 MYH3P11055 1940 aa27.97■■■□□ 2.07
LRRK1-208ENST00000532029 CSF1RP07333 972 aa27.97■■■□□ 2.07
LRRK1-208ENST00000532029 EPHA10Q5JZY3 1008 aa27.97■■■□□ 2.07
LRRK1-208ENST00000532029 LMBR1LQ6UX01 489 aa27.97■■■□□ 2.07
LRRK1-208ENST00000532029 ZNF219Q9P2Y4 722 aaPredicted RBP27.97■■■□□ 2.07
LRRK1-208ENST00000532029 GRIN3BO60391 1043 aa27.96■■■□□ 2.07
LRRK1-208ENST00000532029 GREM2Q9H772 168 aa27.96■■■□□ 2.07
LRRK1-208ENST00000532029 RTL9Q8NET4 1388 aa27.96■■■□□ 2.07
LRRK1-208ENST00000532029 PPEF1O14829 653 aaPredicted RBP27.95■■■□□ 2.06
LRRK1-208ENST00000532029 BBOX1O75936 387 aa27.95■■■□□ 2.06
LRRK1-208ENST00000532029 KAZALD1Q96I82 304 aa27.95■■■□□ 2.06
LRRK1-208ENST00000532029 BICC1Q9H694 974 aaKnown RBP27.95■■■□□ 2.06
LRRK1-208ENST00000532029 SEC31BQ9NQW1 1179 aa27.95■■■□□ 2.06
LRRK1-208ENST00000532029 CACNA1SQ13698 1873 aa27.95■■■□□ 2.06
LRRK1-208ENST00000532029 C21orf2O43822 256 aa27.94■■■□□ 2.06
LRRK1-208ENST00000532029 MVPQ14764 893 aaKnown RBP27.94■■■□□ 2.06
LRRK1-208ENST00000532029 FAM161AQ3B820 660 aa27.94■■■□□ 2.06
LRRK1-208ENST00000532029 CDC5LQ99459 802 aaKnown RBP27.94■■■□□ 2.06
LRRK1-208ENST00000532029 TMX4Q9H1E5 349 aaPredicted RBP27.94■■■□□ 2.06
LRRK1-208ENST00000532029 COG6Q9Y2V7 657 aa27.94■■■□□ 2.06
LRRK1-208ENST00000532029 SLX4Q8IY92 1834 aa27.93■■■□□ 2.06
LRRK1-208ENST00000532029 C20orf194Q5TEA3 1177 aa27.93■■■□□ 2.06
LRRK1-208ENST00000532029 SOGA3Q5TF21 947 aa27.93■■■□□ 2.06
LRRK1-208ENST00000532029 CELF1Q92879 486 aaKnown RBP27.93■■■□□ 2.06
LRRK1-208ENST00000532029 LRRFIP2Q9Y608 721 aaKnown RBP27.93■■■□□ 2.06
LRRK1-208ENST00000532029 ARFGEF1Q9Y6D6 1849 aa27.92■■■□□ 2.06
LRRK1-208ENST00000532029 ANKRD18BA2A2Z9 1011 aa27.92■■■□□ 2.06
LRRK1-208ENST00000532029 ITGA6P23229 1130 aa27.92■■■□□ 2.06
LRRK1-208ENST00000532029 RPS8P62241 208 aaKnown RBP27.92■■■□□ 2.06
LRRK1-208ENST00000532029 TMC4Q7Z404 712 aa27.92■■■□□ 2.06
LRRK1-208ENST00000532029 ANKRD18AQ8IVF6 992 aa27.92■■■□□ 2.06
LRRK1-208ENST00000532029 DDX19BQ9UMR2 479 aa27.92■■■□□ 2.06
LRRK1-208ENST00000532029 GNAI2P04899 355 aa27.91■■■□□ 2.06
LRRK1-208ENST00000532029 IFIT5Q13325 482 aaKnown RBP27.91■■■□□ 2.06
LRRK1-208ENST00000532029 RABL6Q3YEC7 729 aaPredicted RBP27.91■■■□□ 2.06
LRRK1-208ENST00000532029 ANKRD44Q8N8A2 993 aa27.91■■■□□ 2.06
LRRK1-208ENST00000532029 ZBTB7BO15156 539 aaPredicted RBP27.9■■■□□ 2.06
LRRK1-208ENST00000532029 CCDC57Q2TAC2 916 aa27.9■■■□□ 2.06
LRRK1-208ENST00000532029 ARHGAP27Q6ZUM4 889 aa27.9■■■□□ 2.06
LRRK1-208ENST00000532029 C7orf43Q8WVR3 580 aa27.9■■■□□ 2.06
LRRK1-208ENST00000532029 CHMP4BQ9H444 224 aaKnown RBP27.9■■■□□ 2.06
LRRK1-208ENST00000532029 IGHMBP2P38935 993 aaKnown RBP27.89■■■□□ 2.06
LRRK1-208ENST00000532029 CCDC93Q567U6 631 aa27.89■■■□□ 2.06
LRRK1-208ENST00000532029 CC2D2BQ6DHV5 1058 aa27.89■■■□□ 2.06
LRRK1-208ENST00000532029 ATP6V0A2Q9Y487 856 aa27.89■■■□□ 2.06
LRRK1-208ENST00000532029 SUPT16HQ9Y5B9 1047 aaKnown RBP27.89■■■□□ 2.06
LRRK1-208ENST00000532029 TAF7LQ5H9L4 462 aa27.88■■■□□ 2.05
LRRK1-208ENST00000532029 SP8Q8IXZ3 490 aa27.88■■■□□ 2.05
LRRK1-208ENST00000532029 TAF1P21675 1872 aa27.87■■■□□ 2.05
LRRK1-208ENST00000532029 OLFM4Q6UX06 510 aa27.86■■■□□ 2.05
LRRK1-208ENST00000532029 COL4A1P02462 1669 aa27.85■■■□□ 2.05
LRRK1-208ENST00000532029 RTKN2Q8IZC4 609 aa27.85■■■□□ 2.05
LRRK1-208ENST00000532029 MPHOSPH8Q99549 860 aa27.85■■■□□ 2.05
LRRK1-208ENST00000532029 GRIPAP1Q4V328 841 aa27.84■■■□□ 2.05
LRRK1-208ENST00000532029 C1orf115Q9H7X2 142 aa27.83■■■□□ 2.05
LRRK1-208ENST00000532029 BSDC1Q9NW68 430 aaPredicted RBP27.83■■■□□ 2.05
LRRK1-208ENST00000532029 YY1P25490 414 aa27.81■■■□□ 2.04
LRRK1-208ENST00000532029 SLC51AQ86UW1 340 aa27.81■■■□□ 2.04
LRRK1-208ENST00000532029 MPNDQ8N594 471 aa27.81■■■□□ 2.04
LRRK1-208ENST00000532029 ZNF594Q96JF6 807 aaPredicted RBP27.81■■■□□ 2.04
LRRK1-208ENST00000532029 TAOK3Q9H2K8 898 aa27.81■■■□□ 2.04
LRRK1-208ENST00000532029 NFKBIEO00221 500 aa27.79■■■□□ 2.04
LRRK1-208ENST00000532029 SRGAP3O43295 1099 aa27.79■■■□□ 2.04
LRRK1-208ENST00000532029 CENPBP07199 599 aaPredicted RBP27.79■■■□□ 2.04
LRRK1-208ENST00000532029 FKBP4Q02790 459 aaKnown RBP eCLIP27.79■■■□□ 2.04
LRRK1-208ENST00000532029 MTX1Q13505 466 aa27.79■■■□□ 2.04
LRRK1-208ENST00000532029 DPP8Q6V1X1 898 aaPredicted RBP27.79■■■□□ 2.04
LRRK1-208ENST00000532029 LDHAL6AQ6ZMR3 332 aa27.79■■■□□ 2.04
LRRK1-208ENST00000532029 CNNM1Q9NRU3 951 aa27.79■■■□□ 2.04
LRRK1-208ENST00000532029 ZBTB40Q9NUA8 1239 aa27.79■■■□□ 2.04
LRRK1-208ENST00000532029 SPEF2Q9C093 1822 aa27.78■■■□□ 2.04
LRRK1-208ENST00000532029 LRRC37AA6NMS7 1700 aa27.78■■■□□ 2.04
LRRK1-208ENST00000532029 RASSF7Q02833 373 aa27.78■■■□□ 2.04
LRRK1-208ENST00000532029 NSFL1CQ9UNZ2 370 aaKnown RBP27.78■■■□□ 2.04
LRRK1-208ENST00000532029 LTBP3Q9NS15 1303 aa27.77■■■□□ 2.04
LRRK1-208ENST00000532029 CRBNQ96SW2 442 aa27.77■■■□□ 2.04
LRRK1-208ENST00000532029 ANKIB1Q9P2G1 1089 aa27.77■■■□□ 2.04
LRRK1-208ENST00000532029 MINPP1Q9UNW1 487 aa27.77■■■□□ 2.04
LRRK1-208ENST00000532029 SNED1Q8TER0 1413 aa27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms