RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 ZBED9Q6R2W3 1325 aa18.95■□□□□ 0.62
NXF1-210ENST00000531579 SMC4Q9NTJ3 1288 aa18.94■□□□□ 0.62
NXF1-210ENST00000531579 RPS8P62241 208 aaKnown RBP18.93■□□□□ 0.62
NXF1-210ENST00000531579 SLC4A10Q6U841 1118 aa18.93■□□□□ 0.62
NXF1-210ENST00000531579 UBE3BQ7Z3V4 1068 aa18.93■□□□□ 0.62
NXF1-210ENST00000531579 JARID2Q92833 1246 aaPredicted RBP18.93■□□□□ 0.62
NXF1-210ENST00000531579 PLA2G12BQ9BX93 195 aa18.93■□□□□ 0.62
NXF1-210ENST00000531579 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
NXF1-210ENST00000531579 VPS33BQ9H267 617 aa18.93■□□□□ 0.62
NXF1-210ENST00000531579 GPBP1L1Q9HC44 474 aaPredicted RBP18.93■□□□□ 0.62
NXF1-210ENST00000531579 PRELPP51888 382 aa18.91■□□□□ 0.62
NXF1-210ENST00000531579 RARSP54136 660 aaKnown RBP18.91■□□□□ 0.62
NXF1-210ENST00000531579 DPY19L2Q6NUT2 758 aa18.91■□□□□ 0.62
NXF1-210ENST00000531579 OLFM4Q6UX06 510 aa18.91■□□□□ 0.62
NXF1-210ENST00000531579 SUPT20HQ8NEM7 779 aa18.91■□□□□ 0.62
NXF1-210ENST00000531579 TTLL11Q8NHH1 800 aa18.91■□□□□ 0.62
NXF1-210ENST00000531579 BCL2L13Q9BXK5 485 aa18.91■□□□□ 0.62
NXF1-210ENST00000531579 C9orf78Q9NZ63 289 aaPredicted RBP18.91■□□□□ 0.62
NXF1-210ENST00000531579 CASP7P55210 303 aa18.9■□□□□ 0.62
NXF1-210ENST00000531579 CTSWP56202 376 aa18.9■□□□□ 0.62
NXF1-210ENST00000531579 CELF1Q92879 486 aaKnown RBP18.9■□□□□ 0.62
NXF1-210ENST00000531579 KDM2BQ8NHM5 1336 aa18.9■□□□□ 0.62
NXF1-210ENST00000531579 FER1L6Q2WGJ9 1857 aa18.89■□□□□ 0.61
NXF1-210ENST00000531579 GRM8O00222 908 aa18.89■□□□□ 0.61
NXF1-210ENST00000531579 MPNDQ8N594 471 aa18.89■□□□□ 0.61
NXF1-210ENST00000531579 ARHGAP45Q92619 1136 aa18.89■□□□□ 0.61
NXF1-210ENST00000531579 CDC5LQ99459 802 aaKnown RBP18.89■□□□□ 0.61
NXF1-210ENST00000531579 API5Q9BZZ5 524 aaKnown RBP18.89■□□□□ 0.61
NXF1-210ENST00000531579 GLTPD2A6NH11 291 aa18.88■□□□□ 0.61
NXF1-210ENST00000531579 IPO8O15397 1037 aaKnown RBP18.88■□□□□ 0.61
NXF1-210ENST00000531579 CSF1RP07333 972 aa18.88■□□□□ 0.61
NXF1-210ENST00000531579 IARSP41252 1262 aaKnown RBP18.88■□□□□ 0.61
NXF1-210ENST00000531579 DPP8Q6V1X1 898 aaPredicted RBP18.88■□□□□ 0.61
NXF1-210ENST00000531579 RTFDC1Q9BY42 306 aaPredicted RBP18.88■□□□□ 0.61
NXF1-210ENST00000531579 ZNF277Q9NRM2 450 aaPredicted RBP18.88■□□□□ 0.61
NXF1-210ENST00000531579 NOB1Q9ULX3 412 aaKnown RBP18.88■□□□□ 0.61
NXF1-210ENST00000531579 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
NXF1-210ENST00000531579 SBF1O95248 1867 aa18.88■□□□□ 0.61
NXF1-210ENST00000531579 ANKRD18AQ8IVF6 992 aa18.87■□□□□ 0.61
NXF1-210ENST00000531579 RTL9Q8NET4 1388 aa18.87■□□□□ 0.61
NXF1-210ENST00000531579 ZNF526Q8TF50 670 aaPredicted RBP18.87■□□□□ 0.61
NXF1-210ENST00000531579 JDP2Q8WYK2 163 aa18.87■□□□□ 0.61
NXF1-210ENST00000531579 SEC31BQ9NQW1 1179 aa18.87■□□□□ 0.61
NXF1-210ENST00000531579 SNED1Q8TER0 1413 aa18.86■□□□□ 0.61
NXF1-210ENST00000531579 KIF16BQ96L93 1317 aa18.86■□□□□ 0.61
NXF1-210ENST00000531579 CACNA1SQ13698 1873 aa18.86■□□□□ 0.61
NXF1-210ENST00000531579 LAMB2P55268 1798 aa18.86■□□□□ 0.61
NXF1-210ENST00000531579 UTYO14607 1347 aa18.85■□□□□ 0.61
NXF1-210ENST00000531579 CCT4P50991 539 aaKnown RBP18.85■□□□□ 0.61
NXF1-210ENST00000531579 CCDC85AQ96PX6 553 aaPredicted RBP18.85■□□□□ 0.61
NXF1-210ENST00000531579 GREM2Q9H772 168 aa18.85■□□□□ 0.61
NXF1-210ENST00000531579 NSFL1CQ9UNZ2 370 aaKnown RBP18.85■□□□□ 0.61
NXF1-210ENST00000531579 FOXO4P98177 505 aa18.84■□□□□ 0.61
NXF1-210ENST00000531579 BSDC1Q9NW68 430 aaPredicted RBP18.84■□□□□ 0.61
NXF1-210ENST00000531579 FZD9O00144 591 aa18.83■□□□□ 0.6
NXF1-210ENST00000531579 IGHMBP2P38935 993 aaKnown RBP18.83■□□□□ 0.6
NXF1-210ENST00000531579 LARGE2Q8N3Y3 721 aa18.83■□□□□ 0.6
NXF1-210ENST00000531579 PODXL2Q9NZ53 605 aa18.83■□□□□ 0.6
NXF1-210ENST00000531579 HDAC5Q9UQL6 1122 aa18.83■□□□□ 0.6
NXF1-210ENST00000531579 ANKRD18BA2A2Z9 1011 aa18.82■□□□□ 0.6
NXF1-210ENST00000531579 ITGA6P23229 1130 aa18.82■□□□□ 0.6
NXF1-210ENST00000531579 IFIT5Q13325 482 aaKnown RBP18.82■□□□□ 0.6
NXF1-210ENST00000531579 PPIP5K2O43314 1243 aa18.81■□□□□ 0.6
NXF1-210ENST00000531579 NBPF7P0C2Y1 421 aaPredicted RBP18.81■□□□□ 0.6
NXF1-210ENST00000531579 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
NXF1-210ENST00000531579 EYA3Q99504 573 aa18.81■□□□□ 0.6
NXF1-210ENST00000531579 MPHOSPH8Q99549 860 aa18.81■□□□□ 0.6
NXF1-210ENST00000531579 USP44Q9H0E7 712 aa18.81■□□□□ 0.6
NXF1-210ENST00000531579 ANKIB1Q9P2G1 1089 aa18.81■□□□□ 0.6
NXF1-210ENST00000531579 BCAR3O75815 825 aa18.8■□□□□ 0.6
NXF1-210ENST00000531579 EIF6P56537 245 aaKnown RBP18.8■□□□□ 0.6
NXF1-210ENST00000531579 GPSM2P81274 684 aa18.8■□□□□ 0.6
NXF1-210ENST00000531579 KIAA2012Q0VF49 1180 aa18.8■□□□□ 0.6
NXF1-210ENST00000531579 WASHC4Q2M389 1173 aa18.8■□□□□ 0.6
NXF1-210ENST00000531579 CCDC57Q2TAC2 916 aa18.8■□□□□ 0.6
NXF1-210ENST00000531579 LMBR1LQ6UX01 489 aa18.8■□□□□ 0.6
NXF1-210ENST00000531579 NIM1KQ8IY84 436 aa18.8■□□□□ 0.6
NXF1-210ENST00000531579 RRAGCQ9HB90 399 aa18.8■□□□□ 0.6
NXF1-210ENST00000531579 CCDC88AQ3V6T2 1871 aa18.8■□□□□ 0.6
NXF1-210ENST00000531579 C6orf229H3BNL8 230 aa18.79■□□□□ 0.6
NXF1-210ENST00000531579 KIF3CO14782 793 aa18.79■□□□□ 0.6
NXF1-210ENST00000531579 ATF7IPQ6VMQ6 1270 aa18.79■□□□□ 0.6
NXF1-210ENST00000531579 TBC1D16Q8TBP0 767 aa18.79■□□□□ 0.6
NXF1-210ENST00000531579 ZC3H12CQ9C0D7 883 aaKnown RBP18.79■□□□□ 0.6
NXF1-210ENST00000531579 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
NXF1-210ENST00000531579 ZNRF3Q9ULT6 936 aa18.79■□□□□ 0.6
NXF1-210ENST00000531579 MINPP1Q9UNW1 487 aa18.79■□□□□ 0.6
NXF1-210ENST00000531579 DICER1Q9UPY3 1922 aaKnown RBP18.78■□□□□ 0.6
NXF1-210ENST00000531579 DDNO94850 711 aaPredicted RBP18.78■□□□□ 0.6
NXF1-210ENST00000531579 ATP2B4P23634 1241 aa18.78■□□□□ 0.6
NXF1-210ENST00000531579 AOC3Q16853 763 aa18.78■□□□□ 0.6
NXF1-210ENST00000531579 FAM161AQ3B820 660 aa18.78■□□□□ 0.6
NXF1-210ENST00000531579 INTS3Q68E01 1043 aaKnown RBP18.78■□□□□ 0.6
NXF1-210ENST00000531579 SLC51AQ86UW1 340 aa18.78■□□□□ 0.6
NXF1-210ENST00000531579 FRAT1Q92837 279 aaPredicted RBP18.78■□□□□ 0.6
NXF1-210ENST00000531579 ANKRD2Q9GZV1 360 aa18.78■□□□□ 0.6
NXF1-210ENST00000531579 POLLQ9UGP5 575 aa18.78■□□□□ 0.6
NXF1-210ENST00000531579 GGA1Q9UJY5 639 aa18.78■□□□□ 0.6
NXF1-210ENST00000531579 CHMP3Q9Y3E7 222 aa18.78■□□□□ 0.6
NXF1-210ENST00000531579 XDHP47989 1333 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms