RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
PTPRK-219ENST00000531050 DNAJC25Q9H1X3 360 aa9.07□□□□□ -0.96
PTPRK-219ENST00000531050 RPS6KL1Q9Y6S9 549 aa9.07□□□□□ -0.96
PTPRK-219ENST00000531050 PIK3R4Q99570 1358 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-219ENST00000531050 EXOC5O00471 708 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 N4BP1O75113 896 aaKnown RBP9.06□□□□□ -0.96
PTPRK-219ENST00000531050 TUBB4AP04350 444 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 GCFC2P16383 781 aaKnown RBP9.06□□□□□ -0.96
PTPRK-219ENST00000531050 ETF1P62495 437 aaKnown RBP9.06□□□□□ -0.96
PTPRK-219ENST00000531050 GRIK3Q13003 919 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 JAKMIP3Q5VZ66 844 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 FAM210AQ96ND0 272 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 PARD6BQ9BYG5 372 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 ADCY2Q08462 1091 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 IQCB1Q15051 598 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 IL17RAQ96F46 866 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 UPF3BQ9BZI7 483 aaKnown RBP9.06□□□□□ -0.96
PTPRK-219ENST00000531050 TNMDQ9H2S6 317 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 DCTPP1Q9H773 170 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 VEZTQ9HBM0 779 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 ETAA1Q9NY74 926 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 DNAI1Q9UI46 699 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 ATP6V1DQ9Y5K8 247 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 ADGRB2O60241 1585 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 FRMPD1Q5SYB0 1578 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 TTC41PQ6P2S7 1318 aa9.06□□□□□ -0.96
PTPRK-219ENST00000531050 YTHDC2Q9H6S0 1430 aaKnown RBP9.05□□□□□ -0.96
PTPRK-219ENST00000531050 RTN2O75298 545 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 CCNHP51946 323 aaPredicted RBP9.05□□□□□ -0.96
PTPRK-219ENST00000531050 ANAPC15P60006 121 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 RSRC2Q7L4I2 434 aaKnown RBP9.05□□□□□ -0.96
PTPRK-219ENST00000531050 FMNL3Q8IVF7 1028 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 CTCFLQ8NI51 663 aaPredicted RBP9.05□□□□□ -0.96
PTPRK-219ENST00000531050 N4BP2L2Q92802 583 aaPredicted RBP9.05□□□□□ -0.96
PTPRK-219ENST00000531050 FAM107BQ9H098 131 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 CHMP3Q9Y3E7 222 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 PARP3Q9Y6F1 533 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 ZC3H13Q5T200 1668 aaKnown RBP9.05□□□□□ -0.96
PTPRK-219ENST00000531050 CTAGE5O15320 804 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 TRIM65Q6PJ69 517 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 ZNF513Q8N8E2 541 aaPredicted RBP9.05□□□□□ -0.96
PTPRK-219ENST00000531050 CNNM3Q8NE01 707 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 KCNB2Q92953 911 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 CLIC6Q96NY7 704 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 BICC1Q9H694 974 aaKnown RBP9.05□□□□□ -0.96
PTPRK-219ENST00000531050 ADGRF5Q8IZF2 1346 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 SETBP1Q9Y6X0 1596 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 PPLO60437 1756 aa9.05□□□□□ -0.96
PTPRK-219ENST00000531050 URI1O94763 535 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 ECM2O94769 699 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 ARID4AP29374 1257 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 DDR1Q08345 913 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 ALDH1L2Q3SY69 923 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 TTC6Q86TZ1 520 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 PRPF38AQ8NAV1 312 aaKnown RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 ZNF483Q8TF39 744 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 DACT1Q9NYF0 836 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 HECW2Q9P2P5 1572 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 POGZQ7Z3K3 1410 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 KCNJ6P48051 423 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 PREPLQ4J6C6 727 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 CFAP70Q5T0N1 1121 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 VPS53Q5VIR6 699 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 MSL3Q8N5Y2 521 aaKnown RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 ZNF526Q8TF50 670 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 ZKSCAN4Q969J2 545 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 TRIM6Q9C030 488 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 OSBPL5Q9H0X9 879 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-219ENST00000531050 CLSTN2Q9H4D0 955 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 MTMR6Q9Y217 621 aa9.04□□□□□ -0.96
PTPRK-219ENST00000531050 EME2A4GXA9 379 aaPredicted RBP9.03□□□□□ -0.96
PTPRK-219ENST00000531050 CCDC151A5D8V7 595 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 GSDMDP57764 484 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 CRYMQ14894 314 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 RABGGTAQ92696 567 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 TRIM35Q9UPQ4 493 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 CAND2O75155 1236 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 IPO7O95373 1038 aaKnown RBP9.03□□□□□ -0.96
PTPRK-219ENST00000531050 MCM6Q14566 821 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 BRD3Q15059 726 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 BEND6Q5SZJ8 279 aaPredicted RBP9.03□□□□□ -0.96
PTPRK-219ENST00000531050 AP1ARQ63HQ0 302 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 CYB5RLQ6IPT4 315 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 SOS1Q07889 1333 aaPredicted RBP9.03□□□□□ -0.96
PTPRK-219ENST00000531050 CD109Q6YHK3 1445 aa9.03□□□□□ -0.96
PTPRK-219ENST00000531050 MYBL2P10244 700 aa9.02□□□□□ -0.96
PTPRK-219ENST00000531050 MRPL12P52815 198 aaKnown RBP9.02□□□□□ -0.96
PTPRK-219ENST00000531050 ISM2Q6H9L7 571 aa9.02□□□□□ -0.96
PTPRK-219ENST00000531050 ARMCX5Q6P1M9 558 aa9.02□□□□□ -0.96
PTPRK-219ENST00000531050 HOMER1Q86YM7 354 aa9.02□□□□□ -0.96
PTPRK-219ENST00000531050 CCDC26Q8TAB7 109 aa9.02□□□□□ -0.96
PTPRK-219ENST00000531050 ESYT1Q9BSJ8 1104 aa9.02□□□□□ -0.96
PTPRK-219ENST00000531050 NUCKS1Q9H1E3 243 aaKnown RBP9.02□□□□□ -0.96
PTPRK-219ENST00000531050 CD248Q9HCU0 757 aa9.02□□□□□ -0.96
PTPRK-219ENST00000531050 IRAK4Q9NWZ3 460 aa9.02□□□□□ -0.96
PTPRK-219ENST00000531050 FAM169AQ9Y6X4 670 aa9.02□□□□□ -0.96
PTPRK-219ENST00000531050 SBNO2Q9Y2G9 1366 aa9.02□□□□□ -0.97
PTPRK-219ENST00000531050 PTCH1Q13635 1447 aa9.02□□□□□ -0.97
PTPRK-219ENST00000531050 MLH3Q9UHC1 1453 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms