RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
RPS3-216ENST00000530721 LMOD1P29536 600 aaPredicted RBP16.56■□□□□ 0.24
RPS3-216ENST00000530721 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
RPS3-216ENST00000530721 IFFO2Q5TF58 517 aa16.56■□□□□ 0.24
RPS3-216ENST00000530721 MPNDQ8N594 471 aa16.56■□□□□ 0.24
RPS3-216ENST00000530721 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
RPS3-216ENST00000530721 ADAMTSL1Q8N6G6 1762 aa16.56■□□□□ 0.24
RPS3-216ENST00000530721 SF3B3Q15393 1217 aaKnown RBP16.55■□□□□ 0.24
RPS3-216ENST00000530721 CCDC30Q5VVM6 783 aa16.55■□□□□ 0.24
RPS3-216ENST00000530721 IRS4O14654 1257 aaPredicted RBP16.54■□□□□ 0.24
RPS3-216ENST00000530721 ITGBL1O95965 494 aaPredicted RBP16.54■□□□□ 0.24
RPS3-216ENST00000530721 SCNN1DP51172 638 aa16.54■□□□□ 0.24
RPS3-216ENST00000530721 RTL5Q5HYW3 569 aaPredicted RBP16.54■□□□□ 0.24
RPS3-216ENST00000530721 ZBTB38Q8NAP3 1195 aaPredicted RBP16.54■□□□□ 0.24
RPS3-216ENST00000530721 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
RPS3-216ENST00000530721 TAF1P21675 1872 aa16.54■□□□□ 0.24
RPS3-216ENST00000530721 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
RPS3-216ENST00000530721 ANP32CO43423 234 aa16.53■□□□□ 0.24
RPS3-216ENST00000530721 DDX58O95786 925 aaKnown RBP16.53■□□□□ 0.24
RPS3-216ENST00000530721 HSP90B1P14625 803 aaKnown RBP16.53■□□□□ 0.24
RPS3-216ENST00000530721 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
RPS3-216ENST00000530721 WWC1Q8IX03 1113 aa16.53■□□□□ 0.24
RPS3-216ENST00000530721 TSPYL6Q8N831 410 aa16.53■□□□□ 0.24
RPS3-216ENST00000530721 MYD88Q99836 296 aa16.53■□□□□ 0.24
RPS3-216ENST00000530721 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
RPS3-216ENST00000530721 LRRC37AA6NMS7 1700 aa16.53■□□□□ 0.24
RPS3-216ENST00000530721 EPS15P42566 896 aa16.52■□□□□ 0.24
RPS3-216ENST00000530721 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
RPS3-216ENST00000530721 CNTROBQ8N137 903 aa16.52■□□□□ 0.24
RPS3-216ENST00000530721 CCDC191Q8NCU4 936 aa16.52■□□□□ 0.24
RPS3-216ENST00000530721 CELF1Q92879 486 aaKnown RBP16.52■□□□□ 0.24
RPS3-216ENST00000530721 TSR2Q969E8 191 aaKnown RBP16.52■□□□□ 0.24
RPS3-216ENST00000530721 LTBP1Q14766 1721 aa16.52■□□□□ 0.24
RPS3-216ENST00000530721 TMEM88BA6NKF7 163 aa16.51■□□□□ 0.23
RPS3-216ENST00000530721 CXCL9Q07325 125 aa16.51■□□□□ 0.23
RPS3-216ENST00000530721 MAP1SQ66K74 1059 aaPredicted RBP16.51■□□□□ 0.23
RPS3-216ENST00000530721 METTL22Q9BUU2 404 aaPredicted RBP16.51■□□□□ 0.23
RPS3-216ENST00000530721 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
RPS3-216ENST00000530721 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
RPS3-216ENST00000530721 IL16Q14005 1332 aa16.5■□□□□ 0.23
RPS3-216ENST00000530721 PCCAP05165 728 aaPredicted RBP16.5■□□□□ 0.23
RPS3-216ENST00000530721 USP50Q70EL3 339 aaPredicted RBP16.5■□□□□ 0.23
RPS3-216ENST00000530721 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
RPS3-216ENST00000530721 CWC25Q9NXE8 425 aaPredicted RBP16.5■□□□□ 0.23
RPS3-216ENST00000530721 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
RPS3-216ENST00000530721 CIAPIN1Q6FI81 312 aa16.49■□□□□ 0.23
RPS3-216ENST00000530721 GPRC5DQ9NZD1 345 aa16.49■□□□□ 0.23
RPS3-216ENST00000530721 NSFL1CQ9UNZ2 370 aaKnown RBP16.49■□□□□ 0.23
RPS3-216ENST00000530721 CNTNAP1P78357 1384 aa16.49■□□□□ 0.23
RPS3-216ENST00000530721 CDHR2Q9BYE9 1310 aa16.48■□□□□ 0.23
RPS3-216ENST00000530721 HSPA1AP0DMV8 641 aaKnown RBP16.48■□□□□ 0.23
RPS3-216ENST00000530721 HSPA1BP0DMV9 641 aaKnown RBP16.48■□□□□ 0.23
RPS3-216ENST00000530721 TNIP1Q15025 636 aa16.48■□□□□ 0.23
RPS3-216ENST00000530721 WASHC4Q2M389 1173 aa16.48■□□□□ 0.23
RPS3-216ENST00000530721 TWISTNBQ3B726 338 aaPredicted RBP16.48■□□□□ 0.23
RPS3-216ENST00000530721 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
RPS3-216ENST00000530721 ADARB2Q9NS39 739 aaKnown RBP16.48■□□□□ 0.23
RPS3-216ENST00000530721 MAP3K2Q9Y2U5 619 aa16.48■□□□□ 0.23
RPS3-216ENST00000530721 COL4A1P02462 1669 aa16.47■□□□□ 0.23
RPS3-216ENST00000530721 PI4KAP2A4QPH2 592 aa16.47■□□□□ 0.23
RPS3-216ENST00000530721 PDE8AO60658 829 aa16.47■□□□□ 0.23
RPS3-216ENST00000530721 RAD17O75943 681 aa16.47■□□□□ 0.23
RPS3-216ENST00000530721 GMPSP49915 693 aaPredicted RBP16.47■□□□□ 0.23
RPS3-216ENST00000530721 CCDC152Q4G0S7 254 aa16.47■□□□□ 0.23
RPS3-216ENST00000530721 PI4KAP1Q8N8J0 262 aa16.47■□□□□ 0.23
RPS3-216ENST00000530721 YDJCA8MPS7 323 aa16.46■□□□□ 0.23
RPS3-216ENST00000530721 C6orf229H3BNL8 230 aa16.46■□□□□ 0.23
RPS3-216ENST00000530721 GPSM2P81274 684 aa16.46■□□□□ 0.23
RPS3-216ENST00000530721 NEXNQ0ZGT2 675 aa16.46■□□□□ 0.23
RPS3-216ENST00000530721 EYA3Q99504 573 aa16.46■□□□□ 0.23
RPS3-216ENST00000530721 BCL2L13Q9BXK5 485 aa16.46■□□□□ 0.23
RPS3-216ENST00000530721 SEC31BQ9NQW1 1179 aa16.46■□□□□ 0.23
RPS3-216ENST00000530721 POLLQ9UGP5 575 aa16.46■□□□□ 0.23
RPS3-216ENST00000530721 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
RPS3-216ENST00000530721 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
RPS3-216ENST00000530721 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
RPS3-216ENST00000530721 IGKV5-2P06315 115 aa16.44■□□□□ 0.22
RPS3-216ENST00000530721 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
RPS3-216ENST00000530721 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
RPS3-216ENST00000530721 TBC1D16Q8TBP0 767 aa16.44■□□□□ 0.22
RPS3-216ENST00000530721 DBNDD1Q9H9R9 158 aa16.44■□□□□ 0.22
RPS3-216ENST00000530721 PODXL2Q9NZ53 605 aa16.44■□□□□ 0.22
RPS3-216ENST00000530721 RASSF10A6NK89 507 aa16.43■□□□□ 0.22
RPS3-216ENST00000530721 RIMBP2O15034 1052 aa16.43■□□□□ 0.22
RPS3-216ENST00000530721 VEGFBP49765 207 aa16.43■□□□□ 0.22
RPS3-216ENST00000530721 G2E3Q7L622 706 aa16.43■□□□□ 0.22
RPS3-216ENST00000530721 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
RPS3-216ENST00000530721 ANKIB1Q9P2G1 1089 aa16.43■□□□□ 0.22
RPS3-216ENST00000530721 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
RPS3-216ENST00000530721 NEURL1BA8MQ27 555 aa16.42■□□□□ 0.22
RPS3-216ENST00000530721 ECE2O60344 883 aa16.42■□□□□ 0.22
RPS3-216ENST00000530721 CTSWP56202 376 aa16.42■□□□□ 0.22
RPS3-216ENST00000530721 FLIIQ13045 1269 aa16.42■□□□□ 0.22
RPS3-216ENST00000530721 DEFB115Q30KQ5 88 aa16.42■□□□□ 0.22
RPS3-216ENST00000530721 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
RPS3-216ENST00000530721 ZC3H12CQ9C0D7 883 aaKnown RBP16.42■□□□□ 0.22
RPS3-216ENST00000530721 CNOT7Q9UIV1 285 aaKnown RBP16.42■□□□□ 0.22
RPS3-216ENST00000530721 ABT1Q9ULW3 272 aaKnown RBP16.42■□□□□ 0.22
RPS3-216ENST00000530721 H7C1D1 291 aa16.41■□□□□ 0.22
RPS3-216ENST00000530721 PSMD14O00487 310 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms