RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 RNMTO43148 476 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-214ENST00000529689 ALDH1L1O75891 902 aa11.56□□□□□ -0.56
CCDC90B-214ENST00000529689 LARGE1O95461 756 aa11.56□□□□□ -0.56
CCDC90B-214ENST00000529689 LRMPQ12912 555 aa11.56□□□□□ -0.56
CCDC90B-214ENST00000529689 MCMDC2Q4G0Z9 681 aa11.56□□□□□ -0.56
CCDC90B-214ENST00000529689 SAMD1Q6SPF0 538 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-214ENST00000529689 IFNL2Q8IZJ0 200 aa11.56□□□□□ -0.56
CCDC90B-214ENST00000529689 TRIM22Q8IYM9 498 aa11.56□□□□□ -0.56
CCDC90B-214ENST00000529689 KIF18AQ8NI77 898 aa11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 TLR7Q9NYK1 1049 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 ZDHHC9Q9Y397 364 aa11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 TTC41PQ6P2S7 1318 aa11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 NPHP3Q7Z494 1330 aa11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 PTPDC1A2A3K4 754 aa11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 POLR3GO15318 223 aaPredicted RBP11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 HS1BP3Q53T59 392 aa11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 UBXN4Q92575 508 aa11.55□□□□□ -0.56
CCDC90B-214ENST00000529689 IPO7O95373 1038 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 ANKRD20A12PQ8NF67 263 aa11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 IP6K1Q92551 441 aa11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 RAI14Q9P0K7 980 aa11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 TTC6Q86TZ1 520 aa11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 NAPBQ9H115 298 aa11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 TRMT112Q9UI30 125 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 IFIT3O14879 490 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 CEP135Q66GS9 1140 aa11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 DDX21Q9NR30 783 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 MYOM2P54296 1465 aa11.54□□□□□ -0.56
CCDC90B-214ENST00000529689 NAP1L1P55209 391 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 STX1AQ16623 288 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 ZNF496Q96IT1 587 aaPredicted RBP11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 PRIMPOLQ96LW4 560 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 PAG1Q9NWQ8 432 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 MTMR6Q9Y217 621 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 CDC42BPBQ9Y5S2 1711 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 RIOK3O14730 519 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 NOC3LQ8WTT2 800 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 UBAC1Q9BSL1 405 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 CBX8Q9HC52 389 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 HMG20BQ9P0W2 317 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 A1BGP04217 495 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 DHX8Q14562 1220 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 TEX35Q5T0J7 233 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 CNNM3Q8NE01 707 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 SBNO1A3KN83 1393 aa11.53□□□□□ -0.56
CCDC90B-214ENST00000529689 IQGAP3Q86VI3 1631 aa11.52□□□□□ -0.56
CCDC90B-214ENST00000529689 KIAA0232Q92628 1395 aa11.52□□□□□ -0.56
CCDC90B-214ENST00000529689 HMGB1P09429 215 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 XBP1P17861 261 aa11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 RPS6KB1P23443 525 aa11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 BEND3Q5T5X7 828 aa11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 ZNF790Q6PG37 636 aa11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 LEO1Q8WVC0 666 aaPredicted RBP11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 SLC26A6Q9BXS9 759 aa11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 IBTKQ9P2D0 1353 aaPredicted RBP11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 TOP1P11387 765 aaKnown RBP11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 PPFIBP1Q86W92 1011 aa11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
CCDC90B-214ENST00000529689 NR1I2O75469 434 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 U2AF2P26368 475 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 SLFNL1Q499Z3 407 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 NACAP1Q9BZK3 213 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 NRBP1Q9UHY1 535 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 ZFYVE16Q7Z3T8 1539 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 GOLGA8AA7E2F4 631 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 G3V3G9 751 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 FTOQ9C0B1 505 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 ZSCAN16Q9H4T2 348 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 CGNQ9P2M7 1197 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 FAM135BQ49AJ0 1406 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 SETD1BQ9UPS6 1966 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 ROBO2Q9HCK4 1378 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 RANBP6O60518 1105 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 SLC9C2Q5TAH2 1124 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 SMTNL1A8MU46 457 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 PRC1O43663 620 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 SNW1Q13573 536 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 TMEM67Q5HYA8 995 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 DHX32Q7L7V1 743 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 LSG1Q9H089 658 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 IFNKQ9P0W0 207 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 DNAI1Q9UI46 699 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 MADDQ8WXG6 1647 aa11.51□□□□□ -0.57
CCDC90B-214ENST00000529689 GIGYF1O75420 1035 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 TNNI3KQ59H18 835 aa11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 MRPS27Q92552 414 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 AKAP2Q9Y2D5 859 aa11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 SLC12A7Q9Y666 1083 aa11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 FPGT-TNNI3KV9GXZ4 949 aa11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 NUTM2BA6NNL0 878 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 NUTM2EB1AL46 878 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 METAP2P50579 478 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 GPS2Q13227 327 aa11.5□□□□□ -0.57
CCDC90B-214ENST00000529689 FILIP1LQ4L180 1135 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms