RNA–Protein interactions for RNA: ENST00000528900.5

RDX-206, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-206ENST00000528900 CCNL1Q9UK58 526 aaPredicted RBP33.84■■■■□ 3.01
RDX-206ENST00000528900 SH3TC1Q8TE82 1336 aa33.84■■■■□ 3.01
RDX-206ENST00000528900 KIF2CQ99661 725 aa33.83■■■■□ 3.01
RDX-206ENST00000528900 SYNE4Q8N205 404 aa33.83■■■■□ 3.01
RDX-206ENST00000528900 ZNF594Q96JF6 807 aaPredicted RBP33.83■■■■□ 3.01
RDX-206ENST00000528900 TBC1D2Q9BYX2 928 aa33.83■■■■□ 3.01
RDX-206ENST00000528900 DBNLQ9UJU6 430 aaKnown RBP33.83■■■■□ 3.01
RDX-206ENST00000528900 RPS6KA4O75676 772 aa33.82■■■■□ 3
RDX-206ENST00000528900 TAF7LQ5H9L4 462 aa33.82■■■■□ 3
RDX-206ENST00000528900 SUSD4Q5VX71 490 aa33.82■■■■□ 3
RDX-206ENST00000528900 ATP5JP18859 108 aa33.81■■■■□ 3
RDX-206ENST00000528900 SNX21Q969T3 373 aa33.81■■■■□ 3
RDX-206ENST00000528900 LRRC24Q50LG9 513 aa33.81■■■■□ 3
RDX-206ENST00000528900 NIP7Q9Y221 180 aaKnown RBP eCLIP33.8■■■■□ 3
RDX-206ENST00000528900 ANKRD18BA2A2Z9 1011 aa33.79■■■■□ 3
RDX-206ENST00000528900 CEP126Q9P2H0 1117 aa33.79■■■■□ 3
RDX-206ENST00000528900 TAF1LQ8IZX4 1826 aa33.79■■■■□ 3
RDX-206ENST00000528900 FAM196AQ6ZSG2 479 aa33.79■■■■□ 3
RDX-206ENST00000528900 SCN7AQ01118 1682 aa33.78■■■■□ 3
RDX-206ENST00000528900 HIP1O00291 1037 aa33.78■■■■□ 3
RDX-206ENST00000528900 KCNQ4P56696 695 aa33.78■■■■□ 3
RDX-206ENST00000528900 RUFY2Q8WXA3 655 aa33.78■■■■□ 3
RDX-206ENST00000528900 ITGA6P23229 1130 aa33.77■■■■□ 3
RDX-206ENST00000528900 PUS3Q9BZE2 481 aaKnown RBP33.77■■■■□ 3
RDX-206ENST00000528900 ZNF609O15014 1411 aa33.77■■■■□ 3
RDX-206ENST00000528900 DBNDD2Q9BQY9 259 aa33.76■■■■□ 3
RDX-206ENST00000528900 GREM2Q9H772 168 aa33.76■■■■□ 3
RDX-206ENST00000528900 AKAP2Q9Y2D5 859 aa33.76■■■■□ 3
RDX-206ENST00000528900 LAMB2P55268 1798 aa33.76■■■□□ 2.99
RDX-206ENST00000528900 RABEP1Q15276 862 aa33.76■■■□□ 2.99
RDX-206ENST00000528900 ZNF772Q68DY9 489 aaPredicted RBP33.76■■■□□ 2.99
RDX-206ENST00000528900 KRT27Q7Z3Y8 459 aa33.76■■■□□ 2.99
RDX-206ENST00000528900 HSCBQ8IWL3 235 aa33.76■■■□□ 2.99
RDX-206ENST00000528900 BOLA2Q9H3K6 86 aa33.76■■■□□ 2.99
RDX-206ENST00000528900 DIAPH3Q9NSV4 1193 aa33.76■■■□□ 2.99
RDX-206ENST00000528900 SGSM2O43147 1006 aa33.75■■■□□ 2.99
RDX-206ENST00000528900 NTSR2O95665 410 aa33.75■■■□□ 2.99
RDX-206ENST00000528900 MCCP23508 829 aa33.74■■■□□ 2.99
RDX-206ENST00000528900 CCDC85AQ96PX6 553 aaPredicted RBP33.74■■■□□ 2.99
RDX-206ENST00000528900 NARFQ9UHQ1 456 aa33.74■■■□□ 2.99
RDX-206ENST00000528900 BRWD3Q6RI45 1802 aa33.74■■■□□ 2.99
RDX-206ENST00000528900 ANO2Q9NQ90 1003 aa33.74■■■□□ 2.99
RDX-206ENST00000528900 RTCBQ9Y3I0 505 aaKnown RBP33.74■■■□□ 2.99
RDX-206ENST00000528900 GNPATO15228 680 aa33.72■■■□□ 2.99
RDX-206ENST00000528900 NEUROD6Q96NK8 337 aa33.72■■■□□ 2.99
RDX-206ENST00000528900 RIPOR2Q9Y4F9 1068 aa33.72■■■□□ 2.99
RDX-206ENST00000528900 DDX60Q8IY21 1712 aaKnown RBP33.71■■■□□ 2.99
RDX-206ENST00000528900 LDHAL6AQ6ZMR3 332 aa33.71■■■□□ 2.99
RDX-206ENST00000528900 C4BP0C0L5 1744 aa33.7■■■□□ 2.99
RDX-206ENST00000528900 A0A1B0GUL7 405 aa33.7■■■□□ 2.99
RDX-206ENST00000528900 RBM6P78332 1123 aaKnown RBP33.7■■■□□ 2.99
RDX-206ENST00000528900 HAUS7Q99871 368 aa33.7■■■□□ 2.99
RDX-206ENST00000528900 RTL9Q8NET4 1388 aa33.7■■■□□ 2.99
RDX-206ENST00000528900 RFX7Q2KHR2 1363 aa33.69■■■□□ 2.98
RDX-206ENST00000528900 ANAPC15P60006 121 aa33.69■■■□□ 2.98
RDX-206ENST00000528900 TIMM10P62072 90 aa33.69■■■□□ 2.98
RDX-206ENST00000528900 TICAM2Q86XR7 235 aa33.69■■■□□ 2.98
RDX-206ENST00000528900 HCLS1P14317 486 aaPredicted RBP33.68■■■□□ 2.98
RDX-206ENST00000528900 CWC27Q6UX04 472 aaKnown RBP33.68■■■□□ 2.98
RDX-206ENST00000528900 ANP32EQ9BTT0 268 aa33.68■■■□□ 2.98
RDX-206ENST00000528900 LRP5O75197 1615 aa33.68■■■□□ 2.98
RDX-206ENST00000528900 FAM177BA6PVY3 158 aa33.67■■■□□ 2.98
RDX-206ENST00000528900 ZPR1O75312 459 aa33.67■■■□□ 2.98
RDX-206ENST00000528900 CCDC152Q4G0S7 254 aa33.67■■■□□ 2.98
RDX-206ENST00000528900 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.67■■■□□ 2.98
RDX-206ENST00000528900 FSD1Q9BTV5 496 aa33.67■■■□□ 2.98
RDX-206ENST00000528900 CNNM1Q9NRU3 951 aa33.67■■■□□ 2.98
RDX-206ENST00000528900 RAD50Q92878 1312 aa33.67■■■□□ 2.98
RDX-206ENST00000528900 HMGB2P26583 209 aaKnown RBP33.67■■■□□ 2.98
RDX-206ENST00000528900 KIAA1211Q6ZU35 1233 aa33.67■■■□□ 2.98
RDX-206ENST00000528900 RIC1Q4ADV7 1423 aa33.66■■■□□ 2.98
RDX-206ENST00000528900 IL17RAQ96F46 866 aa33.66■■■□□ 2.98
RDX-206ENST00000528900 BCL2L12Q9HB09 334 aa33.66■■■□□ 2.98
RDX-206ENST00000528900 METTL24Q5JXM2 366 aa33.65■■■□□ 2.98
RDX-206ENST00000528900 SLC27A3Q5K4L6 730 aa33.65■■■□□ 2.98
RDX-206ENST00000528900 IL25Q9H293 177 aa33.65■■■□□ 2.98
RDX-206ENST00000528900 USPL1Q5W0Q7 1092 aa33.65■■■□□ 2.98
RDX-206ENST00000528900 IL27Q8NEV9 243 aa33.64■■■□□ 2.98
RDX-206ENST00000528900 NYXQ9GZU5 481 aa33.63■■■□□ 2.97
RDX-206ENST00000528900 SNRKQ9NRH2 765 aa33.63■■■□□ 2.97
RDX-206ENST00000528900 LSG1Q9H089 658 aaKnown RBP33.63■■■□□ 2.97
RDX-206ENST00000528900 SPEF2Q9C093 1822 aa33.62■■■□□ 2.97
RDX-206ENST00000528900 MROH5Q6ZUA9 1318 aa33.62■■■□□ 2.97
RDX-206ENST00000528900 ADRA2BP18089 450 aa33.62■■■□□ 2.97
RDX-206ENST00000528900 CCDC158Q5M9N0 1113 aa33.62■■■□□ 2.97
RDX-206ENST00000528900 ARHGEF1Q92888 912 aaKnown RBP33.62■■■□□ 2.97
RDX-206ENST00000528900 ABCC12Q96J65 1359 aa33.62■■■□□ 2.97
RDX-206ENST00000528900 COL24A1Q17RW2 1714 aa33.61■■■□□ 2.97
RDX-206ENST00000528900 TBC1D9BQ66K14 1250 aa33.61■■■□□ 2.97
RDX-206ENST00000528900 HSPA4P34932 840 aa33.6■■■□□ 2.97
RDX-206ENST00000528900 ATP2B3Q16720 1220 aa33.6■■■□□ 2.97
RDX-206ENST00000528900 TRAPPC3LQ5T215 181 aa33.6■■■□□ 2.97
RDX-206ENST00000528900 XAGE2Q96GT9 111 aa33.6■■■□□ 2.97
RDX-206ENST00000528900 SETDB2Q96T68 719 aa33.6■■■□□ 2.97
RDX-206ENST00000528900 SLC10A5Q5PT55 438 aa33.6■■■□□ 2.97
RDX-206ENST00000528900 GORABQ5T7V8 394 aa33.6■■■□□ 2.97
RDX-206ENST00000528900 VGLL2Q8N8G2 317 aa33.6■■■□□ 2.97
RDX-206ENST00000528900 DNAJC2Q99543 621 aaKnown RBP33.6■■■□□ 2.97
RDX-206ENST00000528900 NMIQ13287 307 aaPredicted RBP33.59■■■□□ 2.97
RDX-206ENST00000528900 LRRC4BQ9NT99 713 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms