RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 RTCBQ9Y3I0 505 aaKnown RBP9.44□□□□□ -0.9
ITGB1-218ENST00000528877 SCN7AQ01118 1682 aa9.44□□□□□ -0.9
ITGB1-218ENST00000528877 USP42Q9H9J4 1324 aaKnown RBP9.43□□□□□ -0.9
ITGB1-218ENST00000528877 PTCD1O75127 700 aaKnown RBP9.43□□□□□ -0.9
ITGB1-218ENST00000528877 NR1I2O75469 434 aa9.43□□□□□ -0.9
ITGB1-218ENST00000528877 CRKLP46109 303 aaKnown RBP9.43□□□□□ -0.9
ITGB1-218ENST00000528877 NLGN2Q8NFZ4 835 aa9.43□□□□□ -0.9
ITGB1-218ENST00000528877 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
ITGB1-218ENST00000528877 CHD4Q14839 1912 aa9.43□□□□□ -0.9
ITGB1-218ENST00000528877 PXDNLA1KZ92 1463 aa9.42□□□□□ -0.9
ITGB1-218ENST00000528877 SOS1Q07889 1333 aaPredicted RBP9.42□□□□□ -0.9
ITGB1-218ENST00000528877 GGCXP38435 758 aa9.42□□□□□ -0.9
ITGB1-218ENST00000528877 COPS2P61201 443 aa9.42□□□□□ -0.9
ITGB1-218ENST00000528877 MDM2Q00987 491 aaPredicted RBP9.42□□□□□ -0.9
ITGB1-218ENST00000528877 LAPTM4AQ15012 233 aa9.42□□□□□ -0.9
ITGB1-218ENST00000528877 GRIPAP1Q4V328 841 aa9.42□□□□□ -0.9
ITGB1-218ENST00000528877 TRAPPC3LQ5T215 181 aa9.42□□□□□ -0.9
ITGB1-218ENST00000528877 PHACTR3Q96KR7 559 aa9.42□□□□□ -0.9
ITGB1-218ENST00000528877 COL15A1P39059 1388 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 HEG1Q9ULI3 1381 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 HTATSF1O43719 755 aaKnown RBP9.41□□□□□ -0.9
ITGB1-218ENST00000528877 ZPR1O75312 459 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 U2AF1L5P0DN76 240 aaPredicted RBP9.41□□□□□ -0.9
ITGB1-218ENST00000528877 CYP19A1P11511 503 aaPredicted RBP9.41□□□□□ -0.9
ITGB1-218ENST00000528877 GYS1P13807 737 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 YY1P25490 414 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 U2AF1Q01081 240 aaKnown RBP eCLIP9.41□□□□□ -0.9
ITGB1-218ENST00000528877 RALBP1Q15311 655 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 INTS5Q6P9B9 1019 aaKnown RBP9.41□□□□□ -0.9
ITGB1-218ENST00000528877 SMIM5Q71RC9 77 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 NLGN1Q8N2Q7 840 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 IL17REQ8NFR9 667 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 CCDC87Q9NVE4 849 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 NRXN2Q9P2S2 1712 aa9.41□□□□□ -0.9
ITGB1-218ENST00000528877 LAMB4A4D0S4 1761 aa9.4□□□□□ -0.9
ITGB1-218ENST00000528877 MMP10P09238 476 aa9.4□□□□□ -0.9
ITGB1-218ENST00000528877 GCGRP47871 477 aa9.4□□□□□ -0.9
ITGB1-218ENST00000528877 TEFQ10587 303 aa9.4□□□□□ -0.9
ITGB1-218ENST00000528877 SLC39A6Q13433 755 aa9.4□□□□□ -0.9
ITGB1-218ENST00000528877 CNGB1Q14028 1251 aaPredicted RBP9.4□□□□□ -0.9
ITGB1-218ENST00000528877 ZNF790Q6PG37 636 aa9.4□□□□□ -0.9
ITGB1-218ENST00000528877 BLOC1S3Q6QNY0 202 aa9.4□□□□□ -0.9
ITGB1-218ENST00000528877 DNAJC10Q8IXB1 793 aa9.4□□□□□ -0.9
ITGB1-218ENST00000528877 NLRP7Q8WX94 980 aa9.4□□□□□ -0.9
ITGB1-218ENST00000528877 BRCA1P38398 1863 aaKnown RBP9.4□□□□□ -0.91
ITGB1-218ENST00000528877 BCORQ6W2J9 1755 aa9.4□□□□□ -0.91
ITGB1-218ENST00000528877 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.91
ITGB1-218ENST00000528877 RFC4P35249 363 aa9.39□□□□□ -0.91
ITGB1-218ENST00000528877 AMHR2Q16671 573 aa9.39□□□□□ -0.91
ITGB1-218ENST00000528877 TTC5Q8N0Z6 440 aa9.39□□□□□ -0.91
ITGB1-218ENST00000528877 PLEKHF1Q96S99 279 aa9.39□□□□□ -0.91
ITGB1-218ENST00000528877 GRIN3BO60391 1043 aa9.38□□□□□ -0.91
ITGB1-218ENST00000528877 CD46P15529 392 aa9.38□□□□□ -0.91
ITGB1-218ENST00000528877 YBX3P16989 372 aaKnown RBP eCLIP9.38□□□□□ -0.91
ITGB1-218ENST00000528877 ZNF496Q96IT1 587 aaPredicted RBP9.38□□□□□ -0.91
ITGB1-218ENST00000528877 TEX13AQ9BXU3 409 aaPredicted RBP9.38□□□□□ -0.91
ITGB1-218ENST00000528877 ZBTB1Q9Y2K1 713 aa9.38□□□□□ -0.91
ITGB1-218ENST00000528877 DLG5Q8TDM6 1919 aa9.38□□□□□ -0.91
ITGB1-218ENST00000528877 ADCY9O60503 1353 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 MYBBP1AQ9BQG0 1328 aaKnown RBP9.37□□□□□ -0.91
ITGB1-218ENST00000528877 STARD3NLO95772 234 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 TGFB2P61812 414 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 USP46P62068 366 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 GPR162Q16538 588 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 ZNF516Q92618 1163 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 FMNL2Q96PY5 1086 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 TMUB1Q9BVT8 246 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 NARFQ9UHQ1 456 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 DLEC1Q9Y238 1755 aa9.37□□□□□ -0.91
ITGB1-218ENST00000528877 BTBD11A6QL63 1104 aa9.36□□□□□ -0.91
ITGB1-218ENST00000528877 POLRMTO00411 1230 aaKnown RBP9.36□□□□□ -0.91
ITGB1-218ENST00000528877 EIF5P55010 431 aaKnown RBP9.36□□□□□ -0.91
ITGB1-218ENST00000528877 DDR1Q08345 913 aa9.36□□□□□ -0.91
ITGB1-218ENST00000528877 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
ITGB1-218ENST00000528877 RTF1Q92541 710 aaKnown RBP9.36□□□□□ -0.91
ITGB1-218ENST00000528877 PNNQ9H307 717 aaKnown RBP9.36□□□□□ -0.91
ITGB1-218ENST00000528877 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
ITGB1-218ENST00000528877 SRP68Q9UHB9 627 aaKnown RBP9.36□□□□□ -0.91
ITGB1-218ENST00000528877 ARFGEF1Q9Y6D6 1849 aa9.35□□□□□ -0.91
ITGB1-218ENST00000528877 N4BP2Q86UW6 1770 aaPredicted RBP9.35□□□□□ -0.91
ITGB1-218ENST00000528877 TM4SF1P30408 202 aa9.35□□□□□ -0.91
ITGB1-218ENST00000528877 IL6STP40189 918 aaPredicted RBP9.35□□□□□ -0.91
ITGB1-218ENST00000528877 NFE2L2Q16236 605 aa9.35□□□□□ -0.91
ITGB1-218ENST00000528877 MCM10Q7L590 875 aa9.35□□□□□ -0.91
ITGB1-218ENST00000528877 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
ITGB1-218ENST00000528877 AFDNP55196 1824 aaKnown RBP9.35□□□□□ -0.91
ITGB1-218ENST00000528877 A0A087WZG4 1122 aa9.34□□□□□ -0.91
ITGB1-218ENST00000528877 NEFMP07197 916 aa9.34□□□□□ -0.91
ITGB1-218ENST00000528877 FUT2Q10981 343 aa9.34□□□□□ -0.91
ITGB1-218ENST00000528877 DDX10Q13206 875 aaKnown RBP9.34□□□□□ -0.91
ITGB1-218ENST00000528877 MORN1Q5T089 497 aa9.34□□□□□ -0.91
ITGB1-218ENST00000528877 USPL1Q5W0Q7 1092 aa9.34□□□□□ -0.91
ITGB1-218ENST00000528877 ZNF784Q8NCA9 323 aaPredicted RBP9.34□□□□□ -0.91
ITGB1-218ENST00000528877 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
ITGB1-218ENST00000528877 MAPK8IP3Q9UPT6 1336 aa9.33□□□□□ -0.92
ITGB1-218ENST00000528877 KCNQ3O43525 872 aa9.33□□□□□ -0.92
ITGB1-218ENST00000528877 KDM4AO75164 1064 aa9.33□□□□□ -0.92
ITGB1-218ENST00000528877 ADH1BP00325 375 aa9.33□□□□□ -0.92
ITGB1-218ENST00000528877 ZEB1P37275 1124 aaPredicted RBP9.33□□□□□ -0.92
ITGB1-218ENST00000528877 SCUBE3Q8IX30 993 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms