RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
EXOSC4-203ENST00000527954 IRS4O14654 1257 aaPredicted RBP19.59■□□□□ 0.73
EXOSC4-203ENST00000527954 SF3B3Q15393 1217 aaKnown RBP19.59■□□□□ 0.73
EXOSC4-203ENST00000527954 CCDC30Q5VVM6 783 aa19.59■□□□□ 0.73
EXOSC4-203ENST00000527954 PNMA8AQ86V59 439 aaPredicted RBP19.59■□□□□ 0.73
EXOSC4-203ENST00000527954 WWC1Q8IX03 1113 aa19.59■□□□□ 0.73
EXOSC4-203ENST00000527954 PASKQ96RG2 1323 aa19.58■□□□□ 0.73
EXOSC4-203ENST00000527954 ANP32CO43423 234 aa19.58■□□□□ 0.72
EXOSC4-203ENST00000527954 ITGBL1O95965 494 aaPredicted RBP19.58■□□□□ 0.72
EXOSC4-203ENST00000527954 LMOD1P29536 600 aaPredicted RBP19.58■□□□□ 0.72
EXOSC4-203ENST00000527954 CCDC27Q2M243 656 aa19.58■□□□□ 0.72
EXOSC4-203ENST00000527954 CELF1Q92879 486 aaKnown RBP19.58■□□□□ 0.72
EXOSC4-203ENST00000527954 CREBZFQ9NS37 354 aa19.58■□□□□ 0.72
EXOSC4-203ENST00000527954 DDX60Q8IY21 1712 aaKnown RBP19.57■□□□□ 0.72
EXOSC4-203ENST00000527954 EPS15P42566 896 aa19.57■□□□□ 0.72
EXOSC4-203ENST00000527954 SCNN1DP51172 638 aa19.57■□□□□ 0.72
EXOSC4-203ENST00000527954 IFFO2Q5TF58 517 aa19.57■□□□□ 0.72
EXOSC4-203ENST00000527954 MAP1SQ66K74 1059 aaPredicted RBP19.57■□□□□ 0.72
EXOSC4-203ENST00000527954 TMC4Q7Z404 712 aa19.57■□□□□ 0.72
EXOSC4-203ENST00000527954 CHMP4AQ9BY43 222 aa19.57■□□□□ 0.72
EXOSC4-203ENST00000527954 ZNRF3Q9ULT6 936 aa19.57■□□□□ 0.72
EXOSC4-203ENST00000527954 CXCL9Q07325 125 aa19.56■□□□□ 0.72
EXOSC4-203ENST00000527954 KIAA2012Q0VF49 1180 aa19.56■□□□□ 0.72
EXOSC4-203ENST00000527954 ZBTB38Q8NAP3 1195 aaPredicted RBP19.56■□□□□ 0.72
EXOSC4-203ENST00000527954 MKRN1Q9UHC7 482 aaKnown RBP19.56■□□□□ 0.72
EXOSC4-203ENST00000527954 DDX58O95786 925 aaKnown RBP19.55■□□□□ 0.72
EXOSC4-203ENST00000527954 TAF1P21675 1872 aa19.55■□□□□ 0.72
EXOSC4-203ENST00000527954 CNTROBQ8N137 903 aa19.55■□□□□ 0.72
EXOSC4-203ENST00000527954 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
EXOSC4-203ENST00000527954 METTL22Q9BUU2 404 aaPredicted RBP19.55■□□□□ 0.72
EXOSC4-203ENST00000527954 ADAMTSL1Q8N6G6 1762 aa19.55■□□□□ 0.72
EXOSC4-203ENST00000527954 LTBP1Q14766 1721 aa19.54■□□□□ 0.72
EXOSC4-203ENST00000527954 CCDC191Q8NCU4 936 aa19.54■□□□□ 0.72
EXOSC4-203ENST00000527954 NSFL1CQ9UNZ2 370 aaKnown RBP19.54■□□□□ 0.72
EXOSC4-203ENST00000527954 SALL2Q9Y467 1007 aaPredicted RBP19.54■□□□□ 0.72
EXOSC4-203ENST00000527954 PCCAP05165 728 aaPredicted RBP19.53■□□□□ 0.72
EXOSC4-203ENST00000527954 TWISTNBQ3B726 338 aaPredicted RBP19.53■□□□□ 0.72
EXOSC4-203ENST00000527954 STK31Q9BXU1 1019 aa19.53■□□□□ 0.72
EXOSC4-203ENST00000527954 CWC25Q9NXE8 425 aaPredicted RBP19.53■□□□□ 0.72
EXOSC4-203ENST00000527954 MAP3K2Q9Y2U5 619 aa19.53■□□□□ 0.72
EXOSC4-203ENST00000527954 COL4A1P02462 1669 aa19.52■□□□□ 0.72
EXOSC4-203ENST00000527954 TMEM88BA6NKF7 163 aa19.52■□□□□ 0.72
EXOSC4-203ENST00000527954 RAD17O75943 681 aa19.52■□□□□ 0.72
EXOSC4-203ENST00000527954 RPS8P62241 208 aaKnown RBP19.52■□□□□ 0.72
EXOSC4-203ENST00000527954 GPSM2P81274 684 aa19.52■□□□□ 0.72
EXOSC4-203ENST00000527954 CIAPIN1Q6FI81 312 aa19.52■□□□□ 0.72
EXOSC4-203ENST00000527954 SEC31BQ9NQW1 1179 aa19.52■□□□□ 0.72
EXOSC4-203ENST00000527954 IL16Q14005 1332 aa19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 PI4KAP2A4QPH2 592 aa19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 HSP90B1P14625 803 aaKnown RBP19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 GMPSP49915 693 aaPredicted RBP19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 KSR2Q6VAB6 950 aa19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 USP50Q70EL3 339 aaPredicted RBP19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 PI4KAP1Q8N8J0 262 aa19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 GPRC5DQ9NZD1 345 aa19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 DUOX1Q9NRD9 1551 aa19.51■□□□□ 0.71
EXOSC4-203ENST00000527954 YDJCA8MPS7 323 aa19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 C6orf229H3BNL8 230 aa19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 RIMBP2O15034 1052 aa19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 PDE8AO60658 829 aa19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 HSPA1AP0DMV8 641 aaKnown RBP19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 HSPA1BP0DMV9 641 aaKnown RBP19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 TNIP1Q15025 636 aa19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 WASHC4Q2M389 1173 aa19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 G2E3Q7L622 706 aa19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 CCDC85AQ96PX6 553 aaPredicted RBP19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 POLLQ9UGP5 575 aa19.5■□□□□ 0.71
EXOSC4-203ENST00000527954 LRRC37AA6NMS7 1700 aa19.49■□□□□ 0.71
EXOSC4-203ENST00000527954 SLC4A2P04920 1241 aa19.49■□□□□ 0.71
EXOSC4-203ENST00000527954 IGKV5-2P06315 115 aa19.49■□□□□ 0.71
EXOSC4-203ENST00000527954 ADARB2Q9NS39 739 aaKnown RBP19.49■□□□□ 0.71
EXOSC4-203ENST00000527954 CNTNAP1P78357 1384 aa19.48■□□□□ 0.71
EXOSC4-203ENST00000527954 FMR1Q06787 632 aaKnown RBP eCLIP19.48■□□□□ 0.71
EXOSC4-203ENST00000527954 CCDC152Q4G0S7 254 aa19.48■□□□□ 0.71
EXOSC4-203ENST00000527954 GPR101Q96P66 508 aaPredicted RBP19.48■□□□□ 0.71
EXOSC4-203ENST00000527954 BCL2L13Q9BXK5 485 aa19.48■□□□□ 0.71
EXOSC4-203ENST00000527954 DBNDD1Q9H9R9 158 aa19.48■□□□□ 0.71
EXOSC4-203ENST00000527954 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
EXOSC4-203ENST00000527954 NEXNQ0ZGT2 675 aa19.47■□□□□ 0.71
EXOSC4-203ENST00000527954 CWF19L2Q2TBE0 894 aaKnown RBP19.47■□□□□ 0.71
EXOSC4-203ENST00000527954 COL13A1Q5TAT6 717 aaPredicted RBP19.47■□□□□ 0.71
EXOSC4-203ENST00000527954 TBC1D16Q8TBP0 767 aa19.47■□□□□ 0.71
EXOSC4-203ENST00000527954 DOK7Q18PE1 504 aa19.46■□□□□ 0.71
EXOSC4-203ENST00000527954 WDR63Q8IWG1 891 aa19.46■□□□□ 0.71
EXOSC4-203ENST00000527954 EYA3Q99504 573 aa19.46■□□□□ 0.71
EXOSC4-203ENST00000527954 CDHR2Q9BYE9 1310 aa19.46■□□□□ 0.71
EXOSC4-203ENST00000527954 TRAF5O00463 557 aa19.45■□□□□ 0.7
EXOSC4-203ENST00000527954 VEGFBP49765 207 aa19.45■□□□□ 0.7
EXOSC4-203ENST00000527954 FAM9BQ8IZU0 186 aa19.45■□□□□ 0.7
EXOSC4-203ENST00000527954 CNOT7Q9UIV1 285 aaKnown RBP19.45■□□□□ 0.7
EXOSC4-203ENST00000527954 ZBTB12Q9Y330 459 aaPredicted RBP19.45■□□□□ 0.7
EXOSC4-203ENST00000527954 PCNTO95613 3336 aa19.44■□□□□ 0.7
EXOSC4-203ENST00000527954 SHTN1A0MZ66 631 aa19.44■□□□□ 0.7
EXOSC4-203ENST00000527954 NEURL1BA8MQ27 555 aa19.44■□□□□ 0.7
EXOSC4-203ENST00000527954 PSMD14O00487 310 aa19.44■□□□□ 0.7
EXOSC4-203ENST00000527954 ECE2O60344 883 aa19.44■□□□□ 0.7
EXOSC4-203ENST00000527954 CTSWP56202 376 aa19.44■□□□□ 0.7
EXOSC4-203ENST00000527954 EXOSC9Q06265 439 aaKnown RBP19.44■□□□□ 0.7
EXOSC4-203ENST00000527954 FLIIQ13045 1269 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms