RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 FAM135BQ49AJ0 1406 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 RGPD8O14715 1765 aaPredicted RBP11.93□□□□□ -0.5
SPIDR-224ENST00000524126 TECPR2O15040 1411 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 TADA3O75528 432 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 PRKAR2BP31323 418 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
SPIDR-224ENST00000524126 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 IQUBQ8NA54 791 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 MNS1Q8NEH6 495 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 EXOC4Q96A65 974 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 DNAI1Q9UI46 699 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 LIMCH1Q9UPQ0 1083 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 SNX14Q9Y5W7 946 aa11.93□□□□□ -0.5
SPIDR-224ENST00000524126 FANCGO15287 622 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 HSPA4P34932 840 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 CDC37L1Q7L3B6 337 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 DDX54Q8TDD1 881 aaKnown RBP11.92□□□□□ -0.5
SPIDR-224ENST00000524126 MRFAP1L1Q96HT8 127 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 TERF2IPQ9NYB0 399 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 SUFUQ9UMX1 484 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 KIF2AO00139 706 aaPredicted RBP11.92□□□□□ -0.5
SPIDR-224ENST00000524126 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
SPIDR-224ENST00000524126 EVCP57679 992 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 LEKR1Q6ZMV7 388 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 HDGFL2Q7Z4V5 671 aaPredicted RBP11.92□□□□□ -0.5
SPIDR-224ENST00000524126 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 PHACTR3Q96KR7 559 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 TBX22Q9Y458 520 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 ATP7BP35670 1465 aa11.92□□□□□ -0.5
SPIDR-224ENST00000524126 KRT85P78386 507 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 ST3GAL1Q11201 340 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 NECAB1Q8N987 351 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 URI1O94763 535 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-224ENST00000524126 SARM1Q6SZW1 724 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 RBM43Q6ZSC3 357 aaKnown RBP11.91□□□□□ -0.5
SPIDR-224ENST00000524126 FBXO41Q8TF61 875 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 PUS7Q96PZ0 661 aaKnown RBP11.91□□□□□ -0.5
SPIDR-224ENST00000524126 DONSONQ9NYP3 566 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 VPS18Q9P253 973 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 USP32Q8NFA0 1604 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
SPIDR-224ENST00000524126 DIAPH1O60610 1272 aaKnown RBP11.9□□□□□ -0.5
SPIDR-224ENST00000524126 HMOX1P09601 288 aa11.9□□□□□ -0.5
SPIDR-224ENST00000524126 MCTP2Q6DN12 878 aa11.9□□□□□ -0.5
SPIDR-224ENST00000524126 CCDC91Q7Z6B0 441 aa11.9□□□□□ -0.5
SPIDR-224ENST00000524126 ANKLE2Q86XL3 938 aa11.9□□□□□ -0.5
SPIDR-224ENST00000524126 BICD2Q8TD16 824 aa11.9□□□□□ -0.5
SPIDR-224ENST00000524126 PSD3Q9NYI0 1048 aa11.9□□□□□ -0.5
SPIDR-224ENST00000524126 GNL2Q13823 731 aaKnown RBP11.9□□□□□ -0.5
SPIDR-224ENST00000524126 CWC27Q6UX04 472 aaKnown RBP11.9□□□□□ -0.5
SPIDR-224ENST00000524126 IL17RAQ96F46 866 aa11.9□□□□□ -0.5
SPIDR-224ENST00000524126 FUT8Q9BYC5 575 aa11.9□□□□□ -0.5
SPIDR-224ENST00000524126 ZSCAN16Q9H4T2 348 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-224ENST00000524126 DDX19AQ9NUU7 478 aaKnown RBP11.9□□□□□ -0.5
SPIDR-224ENST00000524126 CCDC61Q9Y6R9 512 aa11.9□□□□□ -0.5
SPIDR-224ENST00000524126 RRS1Q15050 365 aaKnown RBP11.9□□□□□ -0.51
SPIDR-224ENST00000524126 CCDC158Q5M9N0 1113 aa11.9□□□□□ -0.51
SPIDR-224ENST00000524126 TTLL5Q6EMB2 1281 aa11.9□□□□□ -0.51
SPIDR-224ENST00000524126 SPATA32Q96LK8 384 aa11.9□□□□□ -0.51
SPIDR-224ENST00000524126 KCND1Q9NSA2 647 aa11.9□□□□□ -0.51
SPIDR-224ENST00000524126 BCCIPQ9P287 314 aaKnown RBP eCLIP11.9□□□□□ -0.51
SPIDR-224ENST00000524126 EMILIN1Q9Y6C2 1016 aa11.9□□□□□ -0.51
SPIDR-224ENST00000524126 ATP8B1O43520 1251 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 ACEP12821 1306 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 GSCP56915 257 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-224ENST00000524126 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 ARMCX5Q6P1M9 558 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 NBPF11Q86T75 865 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 TTC21AQ8NDW8 1320 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 PPM1EQ8WY54 764 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 PGBD1Q96JS3 809 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 LRRC7Q96NW7 1537 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 SALL3Q9BXA9 1300 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 SSH2Q76I76 1423 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 IVLP07476 585 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 CORO7P57737 925 aa11.89□□□□□ -0.51
SPIDR-224ENST00000524126 SETD1BQ9UPS6 1966 aaKnown RBP11.88□□□□□ -0.51
SPIDR-224ENST00000524126 BECN2A8MW95 431 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 N4BP1O75113 896 aaKnown RBP11.88□□□□□ -0.51
SPIDR-224ENST00000524126 GNAI1P63096 354 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 SKIDA1Q1XH10 827 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
SPIDR-224ENST00000524126 SUGP1Q8IWZ8 645 aaKnown RBP11.88□□□□□ -0.51
SPIDR-224ENST00000524126 DHX40Q8IX18 779 aaKnown RBP11.88□□□□□ -0.51
SPIDR-224ENST00000524126 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
SPIDR-224ENST00000524126 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
SPIDR-224ENST00000524126 CPSF1Q10570 1443 aaKnown RBP11.88□□□□□ -0.51
SPIDR-224ENST00000524126 KIF24Q5T7B8 1368 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 FAM83GA6ND36 823 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 MMS22LQ6ZRQ5 1243 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
SPIDR-224ENST00000524126 PDE11AQ9HCR9 933 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 ARFGAP3Q9NP61 516 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 HYPKQ9NX55 129 aa11.88□□□□□ -0.51
SPIDR-224ENST00000524126 EFCAB8A8MWE9 144 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms