RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 PCSK7Q16549 785 aa8.58□□□□□ -1.04
NSMCE2-211ENST00000523549 MSL1Q68DK7 614 aa8.58□□□□□ -1.04
NSMCE2-211ENST00000523549 IFT43Q96FT9 208 aa8.58□□□□□ -1.04
NSMCE2-211ENST00000523549 CALR3Q96L12 384 aaKnown RBP8.58□□□□□ -1.04
NSMCE2-211ENST00000523549 PSMG3-AS1Q96PY0 264 aa8.58□□□□□ -1.04
NSMCE2-211ENST00000523549 FRRS1LQ9P0K9 344 aa8.58□□□□□ -1.04
NSMCE2-211ENST00000523549 EPB42P16452 691 aa8.57□□□□□ -1.04
NSMCE2-211ENST00000523549 TARSP26639 723 aaKnown RBP8.57□□□□□ -1.04
NSMCE2-211ENST00000523549 FAM35AQ86V20 835 aa8.57□□□□□ -1.04
NSMCE2-211ENST00000523549 TTC9Q92623 222 aa8.57□□□□□ -1.04
NSMCE2-211ENST00000523549 MYO19Q96H55 970 aa8.57□□□□□ -1.04
NSMCE2-211ENST00000523549 OPLAHO14841 1288 aa8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 FOXO3O43524 673 aa8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 MICAL2O94851 1124 aa8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 LMOD1P29536 600 aaPredicted RBP8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 PLAURQ03405 335 aa8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 DGKZQ13574 1117 aa8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 PERM1Q5SV97 790 aa8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 ARTNQ5T4W7 220 aa8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 DTWD1Q8N5C7 304 aa8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 CECR2Q9BXF3 1484 aa8.56□□□□□ -1.04
NSMCE2-211ENST00000523549 ARSDP51689 593 aa8.55□□□□□ -1.04
NSMCE2-211ENST00000523549 TMEM132AQ24JP5 1023 aa8.55□□□□□ -1.04
NSMCE2-211ENST00000523549 C11orf91Q3C1V1 193 aa8.55□□□□□ -1.04
NSMCE2-211ENST00000523549 DHX32Q7L7V1 743 aaKnown RBP8.55□□□□□ -1.04
NSMCE2-211ENST00000523549 FBXO11Q86XK2 927 aa8.55□□□□□ -1.04
NSMCE2-211ENST00000523549 CPB1P15086 417 aa8.54□□□□□ -1.04
NSMCE2-211ENST00000523549 GPLD1P80108 840 aa8.54□□□□□ -1.04
NSMCE2-211ENST00000523549 KRTAP9-2Q9BYQ4 174 aa8.54□□□□□ -1.04
NSMCE2-211ENST00000523549 LRFN2Q9ULH4 789 aa8.54□□□□□ -1.04
NSMCE2-211ENST00000523549 CCDC180Q9P1Z9 1646 aa8.54□□□□□ -1.04
NSMCE2-211ENST00000523549 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.53□□□□□ -1.04
NSMCE2-211ENST00000523549 SASH3O75995 380 aa8.53□□□□□ -1.04
NSMCE2-211ENST00000523549 EGFRP00533 1210 aa8.53□□□□□ -1.04
NSMCE2-211ENST00000523549 KRT25Q7Z3Z0 450 aa8.53□□□□□ -1.04
NSMCE2-211ENST00000523549 ZFP64Q9NPA5 681 aa8.53□□□□□ -1.04
NSMCE2-211ENST00000523549 RB1CC1Q8TDY2 1594 aa8.52□□□□□ -1.04
NSMCE2-211ENST00000523549 UNC13AQ9UPW8 1703 aa8.52□□□□□ -1.05
NSMCE2-211ENST00000523549 CFAP70Q5T0N1 1121 aa8.52□□□□□ -1.05
NSMCE2-211ENST00000523549 TP53INP1Q96A56 240 aa8.52□□□□□ -1.05
NSMCE2-211ENST00000523549 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
NSMCE2-211ENST00000523549 RARAP10276 462 aa8.51□□□□□ -1.05
NSMCE2-211ENST00000523549 WFDC12Q8WWY7 111 aa8.51□□□□□ -1.05
NSMCE2-211ENST00000523549 USP21Q9UK80 565 aa8.51□□□□□ -1.05
NSMCE2-211ENST00000523549 DEAF1O75398 565 aaPredicted RBP8.5□□□□□ -1.05
NSMCE2-211ENST00000523549 NRLP54845 237 aa8.5□□□□□ -1.05
NSMCE2-211ENST00000523549 ELMSAN1Q6PJG2 1045 aa8.5□□□□□ -1.05
NSMCE2-211ENST00000523549 IGF2-ASQ6U949 168 aa8.5□□□□□ -1.05
NSMCE2-211ENST00000523549 TLR7Q9NYK1 1049 aaKnown RBP8.5□□□□□ -1.05
NSMCE2-211ENST00000523549 RTCBQ9Y3I0 505 aaKnown RBP8.5□□□□□ -1.05
NSMCE2-211ENST00000523549 CC2D2AQ9P2K1 1620 aa8.5□□□□□ -1.05
NSMCE2-211ENST00000523549 NOS3P29474 1203 aa8.49□□□□□ -1.05
NSMCE2-211ENST00000523549 MLLT1Q03111 559 aaPredicted RBP8.49□□□□□ -1.05
NSMCE2-211ENST00000523549 WFDC8Q8IUA0 241 aa8.49□□□□□ -1.05
NSMCE2-211ENST00000523549 FAM200AQ8TCP9 573 aa8.49□□□□□ -1.05
NSMCE2-211ENST00000523549 USP20Q9Y2K6 914 aa8.49□□□□□ -1.05
NSMCE2-211ENST00000523549 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
NSMCE2-211ENST00000523549 SMG9Q9H0W8 520 aaKnown RBP8.48□□□□□ -1.05
NSMCE2-211ENST00000523549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.48□□□□□ -1.05
NSMCE2-211ENST00000523549 KCNMB2Q9Y691 235 aa8.48□□□□□ -1.05
NSMCE2-211ENST00000523549 DLL1O00548 723 aa8.47□□□□□ -1.05
NSMCE2-211ENST00000523549 IREB2P48200 963 aaKnown RBP8.47□□□□□ -1.05
NSMCE2-211ENST00000523549 COX20Q5RI15 118 aa8.47□□□□□ -1.05
NSMCE2-211ENST00000523549 HFE2Q6ZVN8 426 aa8.47□□□□□ -1.05
NSMCE2-211ENST00000523549 VTI1AQ96AJ9 217 aa8.47□□□□□ -1.05
NSMCE2-211ENST00000523549 LOC102724428A0A0B4J2F2 783 aa8.46□□□□□ -1.06
NSMCE2-211ENST00000523549 HYAL3O43820 417 aaPredicted RBP8.46□□□□□ -1.06
NSMCE2-211ENST00000523549 XYLBO75191 536 aa8.46□□□□□ -1.06
NSMCE2-211ENST00000523549 HOXD8P13378 290 aaPredicted RBP8.46□□□□□ -1.06
NSMCE2-211ENST00000523549 SIK1P57059 783 aa8.46□□□□□ -1.06
NSMCE2-211ENST00000523549 FKBP5Q13451 457 aaPredicted RBP8.46□□□□□ -1.06
NSMCE2-211ENST00000523549 LRP8Q14114 963 aa8.46□□□□□ -1.06
NSMCE2-211ENST00000523549 TREML1Q86YW5 311 aa8.46□□□□□ -1.06
NSMCE2-211ENST00000523549 ARID4AP29374 1257 aaPredicted RBP8.45□□□□□ -1.06
NSMCE2-211ENST00000523549 MEGF10Q96KG7 1140 aa8.45□□□□□ -1.06
NSMCE2-211ENST00000523549 J3QW42 95 aa8.44□□□□□ -1.06
NSMCE2-211ENST00000523549 MMP20O60882 483 aa8.44□□□□□ -1.06
NSMCE2-211ENST00000523549 FAM69CQ0P6D2 419 aa8.44□□□□□ -1.06
NSMCE2-211ENST00000523549 CDCA8Q53HL2 280 aa8.44□□□□□ -1.06
NSMCE2-211ENST00000523549 DZIP1LQ8IYY4 767 aaKnown RBP8.44□□□□□ -1.06
NSMCE2-211ENST00000523549 RGL4Q8IZJ4 473 aa8.44□□□□□ -1.06
NSMCE2-211ENST00000523549 CMTR1Q8N1G2 835 aaKnown RBP8.44□□□□□ -1.06
NSMCE2-211ENST00000523549 TMEM130Q8N3G9 435 aa8.44□□□□□ -1.06
NSMCE2-211ENST00000523549 CUX2O14529 1486 aa8.44□□□□□ -1.06
NSMCE2-211ENST00000523549 EIF2AK2P19525 551 aaKnown RBP8.43□□□□□ -1.06
NSMCE2-211ENST00000523549 SOX18P35713 384 aa8.43□□□□□ -1.06
NSMCE2-211ENST00000523549 OCLNQ16625 522 aa8.43□□□□□ -1.06
NSMCE2-211ENST00000523549 ETFBKMTQ8IXQ9 262 aa8.43□□□□□ -1.06
NSMCE2-211ENST00000523549 PLD4Q96BZ4 506 aa8.43□□□□□ -1.06
NSMCE2-211ENST00000523549 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
NSMCE2-211ENST00000523549 NOVA2Q9UNW9 492 aaKnown RBP8.43□□□□□ -1.06
NSMCE2-211ENST00000523549 RFX1P22670 979 aa8.42□□□□□ -1.06
NSMCE2-211ENST00000523549 SWI5Q1ZZU3 235 aa8.42□□□□□ -1.06
NSMCE2-211ENST00000523549 PRIMPOLQ96LW4 560 aa8.42□□□□□ -1.06
NSMCE2-211ENST00000523549 SAP130Q9H0E3 1048 aa8.42□□□□□ -1.06
NSMCE2-211ENST00000523549 ACIN1Q9UKV3 1341 aaKnown RBP8.42□□□□□ -1.06
NSMCE2-211ENST00000523549 PSAPP07602 524 aa8.41□□□□□ -1.06
NSMCE2-211ENST00000523549 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
NSMCE2-211ENST00000523549 FAM26DQ5JW98 314 aa8.41□□□□□ -1.06
NSMCE2-211ENST00000523549 PRR23CQ6ZRP0 262 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms