RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 PLBD2Q8NHP8 589 aa12.28□□□□□ -0.44
SDC2-207ENST00000522911 RUNDC1Q96C34 613 aa12.28□□□□□ -0.44
SDC2-207ENST00000522911 ISCA1Q9BUE6 129 aa12.28□□□□□ -0.44
SDC2-207ENST00000522911 TRMT112Q9UI30 125 aaKnown RBP12.28□□□□□ -0.44
SDC2-207ENST00000522911 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
SDC2-207ENST00000522911 LRRC37AA6NMS7 1700 aa12.28□□□□□ -0.44
SDC2-207ENST00000522911 ANXA1P04083 346 aa12.27□□□□□ -0.45
SDC2-207ENST00000522911 TNIP1Q15025 636 aa12.27□□□□□ -0.45
SDC2-207ENST00000522911 CST9Q5W186 159 aa12.27□□□□□ -0.45
SDC2-207ENST00000522911 MPNDQ8N594 471 aa12.27□□□□□ -0.45
SDC2-207ENST00000522911 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
SDC2-207ENST00000522911 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
SDC2-207ENST00000522911 LAMB2P55268 1798 aa12.27□□□□□ -0.45
SDC2-207ENST00000522911 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
SDC2-207ENST00000522911 HCLS1P14317 486 aaPredicted RBP12.26□□□□□ -0.45
SDC2-207ENST00000522911 MAP2K2P36507 400 aa12.26□□□□□ -0.45
SDC2-207ENST00000522911 CIAPIN1Q6FI81 312 aa12.26□□□□□ -0.45
SDC2-207ENST00000522911 ANKRD13DQ6ZTN6 518 aa12.26□□□□□ -0.45
SDC2-207ENST00000522911 SLC51AQ86UW1 340 aa12.26□□□□□ -0.45
SDC2-207ENST00000522911 DPF2Q92785 391 aa12.26□□□□□ -0.45
SDC2-207ENST00000522911 HYPKQ9NX55 129 aa12.26□□□□□ -0.45
SDC2-207ENST00000522911 ABT1Q9ULW3 272 aaKnown RBP12.26□□□□□ -0.45
SDC2-207ENST00000522911 ZNF853P0CG23 659 aa12.25□□□□□ -0.45
SDC2-207ENST00000522911 HSPA8P11142 646 aaKnown RBP12.25□□□□□ -0.45
SDC2-207ENST00000522911 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
SDC2-207ENST00000522911 SAPCD2Q86UD0 394 aa12.25□□□□□ -0.45
SDC2-207ENST00000522911 CAPNS2Q96L46 248 aa12.25□□□□□ -0.45
SDC2-207ENST00000522911 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
SDC2-207ENST00000522911 TRPM7Q96QT4 1865 aa12.25□□□□□ -0.45
SDC2-207ENST00000522911 ZNF609O15014 1411 aa12.24□□□□□ -0.45
SDC2-207ENST00000522911 CA12O43570 354 aa12.24□□□□□ -0.45
SDC2-207ENST00000522911 HSP90B1P14625 803 aaKnown RBP12.24□□□□□ -0.45
SDC2-207ENST00000522911 GMPSP49915 693 aaPredicted RBP12.24□□□□□ -0.45
SDC2-207ENST00000522911 LBX1P52954 281 aa12.24□□□□□ -0.45
SDC2-207ENST00000522911 AIMP1Q12904 312 aaKnown RBP12.24□□□□□ -0.45
SDC2-207ENST00000522911 GPR101Q96P66 508 aaPredicted RBP12.24□□□□□ -0.45
SDC2-207ENST00000522911 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
SDC2-207ENST00000522911 TCERG1O14776 1098 aaKnown RBP12.23□□□□□ -0.45
SDC2-207ENST00000522911 CAPN15O75808 1086 aa12.23□□□□□ -0.45
SDC2-207ENST00000522911 RPS12P25398 132 aaKnown RBP12.23□□□□□ -0.45
SDC2-207ENST00000522911 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
SDC2-207ENST00000522911 KRT24Q2M2I5 525 aa12.23□□□□□ -0.45
SDC2-207ENST00000522911 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
SDC2-207ENST00000522911 PODXL2Q9NZ53 605 aa12.23□□□□□ -0.45
SDC2-207ENST00000522911 DDX60Q8IY21 1712 aaKnown RBP12.23□□□□□ -0.45
SDC2-207ENST00000522911 TRAF5O00463 557 aa12.22□□□□□ -0.45
SDC2-207ENST00000522911 HIRAP54198 1017 aaPredicted RBP12.22□□□□□ -0.45
SDC2-207ENST00000522911 CDC37L1Q7L3B6 337 aa12.22□□□□□ -0.45
SDC2-207ENST00000522911 CNOT7Q9UIV1 285 aaKnown RBP12.22□□□□□ -0.45
SDC2-207ENST00000522911 ADAMTS8Q9UP79 889 aa12.22□□□□□ -0.45
SDC2-207ENST00000522911 H7C1D1 291 aa12.21□□□□□ -0.45
SDC2-207ENST00000522911 BRPF1P55201 1214 aaPredicted RBP12.21□□□□□ -0.45
SDC2-207ENST00000522911 CALD1Q05682 793 aaKnown RBP12.21□□□□□ -0.45
SDC2-207ENST00000522911 FMR1Q06787 632 aaKnown RBP eCLIP12.21□□□□□ -0.45
SDC2-207ENST00000522911 WASHC4Q2M389 1173 aa12.21□□□□□ -0.45
SDC2-207ENST00000522911 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.45
SDC2-207ENST00000522911 CCDC146Q8IYE0 955 aa12.21□□□□□ -0.45
SDC2-207ENST00000522911 ZBTB38Q8NAP3 1195 aaPredicted RBP12.21□□□□□ -0.45
SDC2-207ENST00000522911 NECTIN2Q92692 538 aa12.21□□□□□ -0.45
SDC2-207ENST00000522911 FAM89AQ96GI7 184 aa12.21□□□□□ -0.45
SDC2-207ENST00000522911 BEGAINQ9BUH8 593 aa12.21□□□□□ -0.45
SDC2-207ENST00000522911 BCL2L13Q9BXK5 485 aa12.21□□□□□ -0.45
SDC2-207ENST00000522911 IFT57Q9NWB7 429 aa12.21□□□□□ -0.45
SDC2-207ENST00000522911 RAD17O75943 681 aa12.2□□□□□ -0.46
SDC2-207ENST00000522911 CELF2O95319 508 aaKnown RBP12.2□□□□□ -0.46
SDC2-207ENST00000522911 RPS8P62241 208 aaKnown RBP12.2□□□□□ -0.46
SDC2-207ENST00000522911 NEUROD2Q15784 382 aa12.2□□□□□ -0.46
SDC2-207ENST00000522911 CYP4F22Q6NT55 531 aa12.2□□□□□ -0.46
SDC2-207ENST00000522911 CCDC191Q8NCU4 936 aa12.2□□□□□ -0.46
SDC2-207ENST00000522911 TRPM4Q8TD43 1214 aa12.2□□□□□ -0.46
SDC2-207ENST00000522911 CELF1Q92879 486 aaKnown RBP12.2□□□□□ -0.46
SDC2-207ENST00000522911 EYA3Q99504 573 aa12.2□□□□□ -0.46
SDC2-207ENST00000522911 PRKRIP1Q9H875 184 aaPredicted RBP12.2□□□□□ -0.46
SDC2-207ENST00000522911 MBIPQ9NS73 344 aa12.2□□□□□ -0.46
SDC2-207ENST00000522911 IRS4O14654 1257 aaPredicted RBP12.19□□□□□ -0.46
SDC2-207ENST00000522911 GNAI1P63096 354 aa12.19□□□□□ -0.46
SDC2-207ENST00000522911 DDX10Q13206 875 aaKnown RBP12.19□□□□□ -0.46
SDC2-207ENST00000522911 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
SDC2-207ENST00000522911 GLIS2Q9BZE0 524 aaPredicted RBP12.19□□□□□ -0.46
SDC2-207ENST00000522911 POLLQ9UGP5 575 aa12.19□□□□□ -0.46
SDC2-207ENST00000522911 NSFL1CQ9UNZ2 370 aaKnown RBP12.19□□□□□ -0.46
SDC2-207ENST00000522911 ATP5J2-PTCD1G3V325 749 aa12.18□□□□□ -0.46
SDC2-207ENST00000522911 PSMD14O00487 310 aa12.18□□□□□ -0.46
SDC2-207ENST00000522911 PCCAP05165 728 aaPredicted RBP12.18□□□□□ -0.46
SDC2-207ENST00000522911 VIL1P09327 827 aaKnown RBP12.18□□□□□ -0.46
SDC2-207ENST00000522911 NOGQ13253 232 aa12.18□□□□□ -0.46
SDC2-207ENST00000522911 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
SDC2-207ENST00000522911 ABHD8Q96I13 439 aa12.18□□□□□ -0.46
SDC2-207ENST00000522911 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
SDC2-207ENST00000522911 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
SDC2-207ENST00000522911 RGS19P49795 217 aa12.17□□□□□ -0.46
SDC2-207ENST00000522911 GPSM2P81274 684 aa12.17□□□□□ -0.46
SDC2-207ENST00000522911 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
SDC2-207ENST00000522911 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
SDC2-207ENST00000522911 ECE2O60344 883 aa12.16□□□□□ -0.46
SDC2-207ENST00000522911 PDE8AO60658 829 aa12.16□□□□□ -0.46
SDC2-207ENST00000522911 CCDC152Q4G0S7 254 aa12.16□□□□□ -0.46
SDC2-207ENST00000522911 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
SDC2-207ENST00000522911 AGBL3Q8NEM8 1001 aa12.16□□□□□ -0.46
SDC2-207ENST00000522911 ZC3H12CQ9C0D7 883 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms