RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 ANKRD44Q8N8A2 993 aa8.51□□□□□ -1.05
CDH12-208ENST00000522262 TTLL11Q8NHH1 800 aa8.51□□□□□ -1.05
CDH12-208ENST00000522262 C7orf43Q8WVR3 580 aa8.51□□□□□ -1.05
CDH12-208ENST00000522262 CELF1Q92879 486 aaKnown RBP8.51□□□□□ -1.05
CDH12-208ENST00000522262 PLA2G12BQ9BX93 195 aa8.51□□□□□ -1.05
CDH12-208ENST00000522262 FER1L6Q2WGJ9 1857 aa8.5□□□□□ -1.05
CDH12-208ENST00000522262 DUOX1Q9NRD9 1551 aa8.5□□□□□ -1.05
CDH12-208ENST00000522262 NPHP1O15259 732 aa8.5□□□□□ -1.05
CDH12-208ENST00000522262 GTF2E1P29083 439 aaPredicted RBP8.5□□□□□ -1.05
CDH12-208ENST00000522262 HOXA10P31260 410 aaPredicted RBP8.5□□□□□ -1.05
CDH12-208ENST00000522262 PDE6BP35913 854 aa8.5□□□□□ -1.05
CDH12-208ENST00000522262 SF3B3Q15393 1217 aaKnown RBP8.5□□□□□ -1.05
CDH12-208ENST00000522262 GREM2Q9H772 168 aa8.5□□□□□ -1.05
CDH12-208ENST00000522262 CTSWP56202 376 aa8.5□□□□□ -1.05
CDH12-208ENST00000522262 H0YIN7 160 aa8.49□□□□□ -1.05
CDH12-208ENST00000522262 CSF1RP07333 972 aa8.49□□□□□ -1.05
CDH12-208ENST00000522262 RRP1P56182 461 aaKnown RBP8.49□□□□□ -1.05
CDH12-208ENST00000522262 FAM161AQ3B820 660 aa8.49□□□□□ -1.05
CDH12-208ENST00000522262 PRPF40BQ6NWY9 871 aaKnown RBP8.49□□□□□ -1.05
CDH12-208ENST00000522262 DZIP1LQ8IYY4 767 aaKnown RBP8.49□□□□□ -1.05
CDH12-208ENST00000522262 MASTLQ96GX5 879 aa8.49□□□□□ -1.05
CDH12-208ENST00000522262 BICC1Q9H694 974 aaKnown RBP8.49□□□□□ -1.05
CDH12-208ENST00000522262 COL4A5P29400 1685 aa8.49□□□□□ -1.05
CDH12-208ENST00000522262 PDE8AO60658 829 aa8.49□□□□□ -1.05
CDH12-208ENST00000522262 CCT4P50991 539 aaKnown RBP8.49□□□□□ -1.05
CDH12-208ENST00000522262 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDH12-208ENST00000522262 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
CDH12-208ENST00000522262 WTIPA6NIX2 430 aaPredicted RBP8.48□□□□□ -1.05
CDH12-208ENST00000522262 ZBTB7BO15156 539 aaPredicted RBP8.48□□□□□ -1.05
CDH12-208ENST00000522262 NPR1P16066 1061 aa8.48□□□□□ -1.05
CDH12-208ENST00000522262 RABL6Q3YEC7 729 aaPredicted RBP8.48□□□□□ -1.05
CDH12-208ENST00000522262 STYK1Q6J9G0 422 aa8.48□□□□□ -1.05
CDH12-208ENST00000522262 C1orf115Q9H7X2 142 aa8.48□□□□□ -1.05
CDH12-208ENST00000522262 PIM2Q9P1W9 311 aa8.48□□□□□ -1.05
CDH12-208ENST00000522262 BCS1LQ9Y276 419 aa8.48□□□□□ -1.05
CDH12-208ENST00000522262 SBF1O95248 1867 aa8.48□□□□□ -1.05
CDH12-208ENST00000522262 IPO8O15397 1037 aaKnown RBP8.48□□□□□ -1.05
CDH12-208ENST00000522262 C9orf78Q9NZ63 289 aaPredicted RBP8.48□□□□□ -1.05
CDH12-208ENST00000522262 ZNF219Q9P2Y4 722 aaPredicted RBP8.48□□□□□ -1.05
CDH12-208ENST00000522262 COG6Q9Y2V7 657 aa8.48□□□□□ -1.05
CDH12-208ENST00000522262 LRRFIP2Q9Y608 721 aaKnown RBP8.48□□□□□ -1.05
CDH12-208ENST00000522262 NFKBIEO00221 500 aa8.47□□□□□ -1.05
CDH12-208ENST00000522262 C21orf2O43822 256 aa8.47□□□□□ -1.05
CDH12-208ENST00000522262 LMBR1LQ6UX01 489 aa8.47□□□□□ -1.05
CDH12-208ENST00000522262 TTLL6Q8N841 843 aa8.47□□□□□ -1.05
CDH12-208ENST00000522262 KLHDC4Q8TBB5 520 aa8.47□□□□□ -1.05
CDH12-208ENST00000522262 CCDC88AQ3V6T2 1871 aa8.47□□□□□ -1.05
CDH12-208ENST00000522262 RTL9Q8NET4 1388 aa8.47□□□□□ -1.05
CDH12-208ENST00000522262 RFX5P48382 616 aaPredicted RBP8.47□□□□□ -1.05
CDH12-208ENST00000522262 DALRD3Q5D0E6 543 aaKnown RBP8.47□□□□□ -1.05
CDH12-208ENST00000522262 ITPRIPQ8IWB1 547 aa8.47□□□□□ -1.05
CDH12-208ENST00000522262 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
CDH12-208ENST00000522262 CRAMP1Q96RY5 1269 aa8.47□□□□□ -1.05
CDH12-208ENST00000522262 ITGA6P23229 1130 aa8.46□□□□□ -1.05
CDH12-208ENST00000522262 RASSF7Q02833 373 aa8.46□□□□□ -1.05
CDH12-208ENST00000522262 GRAPQ13588 217 aa8.46□□□□□ -1.05
CDH12-208ENST00000522262 MVPQ14764 893 aaKnown RBP8.46□□□□□ -1.05
CDH12-208ENST00000522262 FTSJ3Q8IY81 847 aaKnown RBP8.46□□□□□ -1.05
CDH12-208ENST00000522262 GRAPLQ8TC17 118 aaPredicted RBP8.46□□□□□ -1.05
CDH12-208ENST00000522262 RPGRQ92834 1020 aaKnown RBP8.46□□□□□ -1.05
CDH12-208ENST00000522262 SUPT16HQ9Y5B9 1047 aaKnown RBP8.46□□□□□ -1.05
CDH12-208ENST00000522262 PNMA6EA0A0J9YXQ4 647 aa8.46□□□□□ -1.06
CDH12-208ENST00000522262 PPEF1O14829 653 aaPredicted RBP8.46□□□□□ -1.06
CDH12-208ENST00000522262 KCNA4P22459 653 aa8.46□□□□□ -1.06
CDH12-208ENST00000522262 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.46□□□□□ -1.06
CDH12-208ENST00000522262 UBTFL1P0CB47 393 aaPredicted RBP8.45□□□□□ -1.06
CDH12-208ENST00000522262 CCDC152Q4G0S7 254 aa8.45□□□□□ -1.06
CDH12-208ENST00000522262 CNKSR1Q969H4 720 aa8.45□□□□□ -1.06
CDH12-208ENST00000522262 RBM17Q96I25 401 aaKnown RBP8.45□□□□□ -1.06
CDH12-208ENST00000522262 PUS3Q9BZE2 481 aaKnown RBP8.45□□□□□ -1.06
CDH12-208ENST00000522262 SNAP23O00161 211 aa8.45□□□□□ -1.06
CDH12-208ENST00000522262 PDE3AQ14432 1141 aa8.45□□□□□ -1.06
CDH12-208ENST00000522262 SIRT2Q8IXJ6 389 aa8.45□□□□□ -1.06
CDH12-208ENST00000522262 ZBTB40Q9NUA8 1239 aa8.45□□□□□ -1.06
CDH12-208ENST00000522262 PDZRN3Q9UPQ7 1066 aa8.45□□□□□ -1.06
CDH12-208ENST00000522262 GPR162Q16538 588 aa8.44□□□□□ -1.06
CDH12-208ENST00000522262 DDX46Q7L014 1031 aaKnown RBP8.44□□□□□ -1.06
CDH12-208ENST00000522262 GPR101Q96P66 508 aaPredicted RBP8.44□□□□□ -1.06
CDH12-208ENST00000522262 ATP6V0A2Q9Y487 856 aa8.44□□□□□ -1.06
CDH12-208ENST00000522262 ALDH1B1P30837 517 aa8.44□□□□□ -1.06
CDH12-208ENST00000522262 RPS8P62241 208 aaKnown RBP8.44□□□□□ -1.06
CDH12-208ENST00000522262 PTPN12Q05209 780 aaKnown RBP8.44□□□□□ -1.06
CDH12-208ENST00000522262 CRBNQ96SW2 442 aa8.44□□□□□ -1.06
CDH12-208ENST00000522262 PA2G4Q9UQ80 394 aaKnown RBP8.44□□□□□ -1.06
CDH12-208ENST00000522262 GPSM2P81274 684 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 MTX1Q13505 466 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 LRRC24Q50LG9 513 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 ZNF646O15015 1829 aaPredicted RBP8.43□□□□□ -1.06
CDH12-208ENST00000522262 TIAM2Q8IVF5 1701 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 CHD4Q14839 1912 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 DICER1Q9UPY3 1922 aaKnown RBP8.43□□□□□ -1.06
CDH12-208ENST00000522262 KLRK1P26718 216 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 IRX6P78412 446 aaPredicted RBP8.43□□□□□ -1.06
CDH12-208ENST00000522262 CEP85Q6P2H3 762 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 CHMP3Q9Y3E7 222 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 IRS2Q9Y4H2 1338 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 PCNTO95613 3336 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 POLLQ9UGP5 575 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 MINPP1Q9UNW1 487 aa8.43□□□□□ -1.06
CDH12-208ENST00000522262 SCN9AQ15858 1988 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms