RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 SIK1P57059 783 aa31.23■■■□□ 2.59
COL13A1-214ENST00000522165 RASEFQ8IZ41 740 aa31.23■■■□□ 2.59
COL13A1-214ENST00000522165 EDC3Q96F86 508 aaKnown RBP31.23■■■□□ 2.59
COL13A1-214ENST00000522165 CCDC87Q9NVE4 849 aa31.23■■■□□ 2.59
COL13A1-214ENST00000522165 BCL9LQ86UU0 1499 aa31.23■■■□□ 2.59
COL13A1-214ENST00000522165 CCDC171Q6TFL3 1326 aa31.23■■■□□ 2.59
COL13A1-214ENST00000522165 ZNF609O15014 1411 aa31.23■■■□□ 2.59
COL13A1-214ENST00000522165 A0A0D9SFI3 127 aa31.22■■■□□ 2.59
COL13A1-214ENST00000522165 VPS72Q15906 364 aa31.22■■■□□ 2.59
COL13A1-214ENST00000522165 SYNE4Q8N205 404 aa31.22■■■□□ 2.59
COL13A1-214ENST00000522165 NGLY1Q96IV0 654 aa31.22■■■□□ 2.59
COL13A1-214ENST00000522165 NEUROD6Q96NK8 337 aa31.22■■■□□ 2.59
COL13A1-214ENST00000522165 C8orf37Q96NL8 207 aa31.22■■■□□ 2.59
COL13A1-214ENST00000522165 CICQ96RK0 1608 aaPredicted RBP31.22■■■□□ 2.59
COL13A1-214ENST00000522165 RFX7Q2KHR2 1363 aa31.21■■■□□ 2.59
COL13A1-214ENST00000522165 CRKLP46109 303 aaKnown RBP31.21■■■□□ 2.59
COL13A1-214ENST00000522165 TIMM10P62072 90 aa31.21■■■□□ 2.59
COL13A1-214ENST00000522165 FAM98CQ17RN3 349 aaKnown RBP31.21■■■□□ 2.59
COL13A1-214ENST00000522165 KCNB2Q92953 911 aa31.21■■■□□ 2.59
COL13A1-214ENST00000522165 ZGPATQ8N5A5 531 aaKnown RBP31.2■■■□□ 2.59
COL13A1-214ENST00000522165 RREB1Q92766 1687 aa31.2■■■□□ 2.58
COL13A1-214ENST00000522165 PALLDQ8WX93 1383 aa31.19■■■□□ 2.58
COL13A1-214ENST00000522165 MED23Q9ULK4 1368 aa31.19■■■□□ 2.58
COL13A1-214ENST00000522165 IFIT5Q13325 482 aaKnown RBP31.19■■■□□ 2.58
COL13A1-214ENST00000522165 ITPK1Q13572 414 aa31.19■■■□□ 2.58
COL13A1-214ENST00000522165 ZNF34Q8IZ26 560 aa31.19■■■□□ 2.58
COL13A1-214ENST00000522165 DNAJC2Q99543 621 aaKnown RBP31.19■■■□□ 2.58
COL13A1-214ENST00000522165 CEP126Q9P2H0 1117 aa31.19■■■□□ 2.58
COL13A1-214ENST00000522165 CUL4AQ13619 759 aa31.18■■■□□ 2.58
COL13A1-214ENST00000522165 MAP4K1Q92918 833 aa31.18■■■□□ 2.58
COL13A1-214ENST00000522165 GBP4Q96PP9 640 aa31.18■■■□□ 2.58
COL13A1-214ENST00000522165 CCDC85AQ96PX6 553 aaPredicted RBP31.18■■■□□ 2.58
COL13A1-214ENST00000522165 TRMT112Q9UI30 125 aaKnown RBP31.18■■■□□ 2.58
COL13A1-214ENST00000522165 NDUFB9Q9Y6M9 179 aa31.18■■■□□ 2.58
COL13A1-214ENST00000522165 DDX11L8A8MPP1 907 aa31.18■■■□□ 2.58
COL13A1-214ENST00000522165 SSFA2P28290 1259 aa31.18■■■□□ 2.58
COL13A1-214ENST00000522165 NECTIN1Q15223 517 aa31.18■■■□□ 2.58
COL13A1-214ENST00000522165 SMARCC1Q92922 1105 aaPredicted RBP31.18■■■□□ 2.58
COL13A1-214ENST00000522165 UBN2Q6ZU65 1347 aa31.17■■■□□ 2.58
COL13A1-214ENST00000522165 NUCB2P80303 420 aa31.17■■■□□ 2.58
COL13A1-214ENST00000522165 TTLL11Q8NHH1 800 aa31.17■■■□□ 2.58
COL13A1-214ENST00000522165 A0A1B0GUL7 405 aa31.17■■■□□ 2.58
COL13A1-214ENST00000522165 IRS4O14654 1257 aaPredicted RBP31.17■■■□□ 2.58
COL13A1-214ENST00000522165 KCNQ2O43526 872 aa31.17■■■□□ 2.58
COL13A1-214ENST00000522165 PRPF40BQ6NWY9 871 aaKnown RBP31.17■■■□□ 2.58
COL13A1-214ENST00000522165 CTSWP56202 376 aa31.16■■■□□ 2.58
COL13A1-214ENST00000522165 TAF7LQ5H9L4 462 aa31.16■■■□□ 2.58
COL13A1-214ENST00000522165 RBM8AQ9Y5S9 174 aaKnown RBP31.16■■■□□ 2.58
COL13A1-214ENST00000522165 FNBP4Q8N3X1 1017 aaPredicted RBP31.15■■■□□ 2.58
COL13A1-214ENST00000522165 TTC14Q96N46 770 aa31.15■■■□□ 2.58
COL13A1-214ENST00000522165 CYP2E1P05181 493 aaPredicted RBP31.15■■■□□ 2.58
COL13A1-214ENST00000522165 CLEC17AQ6ZS10 378 aa31.14■■■□□ 2.58
COL13A1-214ENST00000522165 MYH3P11055 1940 aa31.14■■■□□ 2.58
COL13A1-214ENST00000522165 NOL8Q76FK4 1167 aaKnown RBP31.13■■■□□ 2.57
COL13A1-214ENST00000522165 AKAP2Q9Y2D5 859 aa31.13■■■□□ 2.57
COL13A1-214ENST00000522165 DDX46Q7L014 1031 aaKnown RBP31.13■■■□□ 2.57
COL13A1-214ENST00000522165 ZNF589Q86UQ0 364 aaPredicted RBP31.13■■■□□ 2.57
COL13A1-214ENST00000522165 KBTBD3Q8NAB2 608 aa31.13■■■□□ 2.57
COL13A1-214ENST00000522165 INTS4Q96HW7 963 aaKnown RBP31.13■■■□□ 2.57
COL13A1-214ENST00000522165 GREM2Q9H772 168 aa31.13■■■□□ 2.57
COL13A1-214ENST00000522165 MYH14Q7Z406 1995 aaKnown RBP31.13■■■□□ 2.57
COL13A1-214ENST00000522165 PDE8AO60658 829 aa31.12■■■□□ 2.57
COL13A1-214ENST00000522165 ITGA6P23229 1130 aa31.12■■■□□ 2.57
COL13A1-214ENST00000522165 TM6SF1Q9BZW5 370 aa31.12■■■□□ 2.57
COL13A1-214ENST00000522165 CREB3L3Q68CJ9 461 aa31.12■■■□□ 2.57
COL13A1-214ENST00000522165 PAG1Q9NWQ8 432 aa31.11■■■□□ 2.57
COL13A1-214ENST00000522165 CAMTA2O94983 1202 aa31.1■■■□□ 2.57
COL13A1-214ENST00000522165 ZKSCAN1P17029 563 aaPredicted RBP31.1■■■□□ 2.57
COL13A1-214ENST00000522165 CASTP20810 708 aaKnown RBP31.1■■■□□ 2.57
COL13A1-214ENST00000522165 KCNJ4P48050 445 aa31.1■■■□□ 2.57
COL13A1-214ENST00000522165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.1■■■□□ 2.57
COL13A1-214ENST00000522165 ANKRD18BA2A2Z9 1011 aa31.1■■■□□ 2.57
COL13A1-214ENST00000522165 TICAM2Q86XR7 235 aa31.1■■■□□ 2.57
COL13A1-214ENST00000522165 RIPOR2Q9Y4F9 1068 aa31.1■■■□□ 2.57
COL13A1-214ENST00000522165 TAF5LO75529 589 aa31.09■■■□□ 2.57
COL13A1-214ENST00000522165 PKP1Q13835 747 aa31.09■■■□□ 2.57
COL13A1-214ENST00000522165 ADCK5Q3MIX3 580 aa31.09■■■□□ 2.57
COL13A1-214ENST00000522165 JAKMIP1Q96N16 626 aaKnown RBP31.09■■■□□ 2.57
COL13A1-214ENST00000522165 SPATA31A6Q5VVP1 1343 aa31.09■■■□□ 2.57
COL13A1-214ENST00000522165 GOLIM4O00461 696 aa31.09■■■□□ 2.57
COL13A1-214ENST00000522165 ZSWIM6Q9HCJ5 1215 aa31.09■■■□□ 2.57
COL13A1-214ENST00000522165 ZNF831Q5JPB2 1677 aa31.08■■■□□ 2.57
COL13A1-214ENST00000522165 RIC1Q4ADV7 1423 aa31.08■■■□□ 2.57
COL13A1-214ENST00000522165 SLC27A2O14975 620 aa31.08■■■□□ 2.57
COL13A1-214ENST00000522165 TRAK2O60296 914 aa31.08■■■□□ 2.57
COL13A1-214ENST00000522165 IFIT1P09914 478 aaKnown RBP31.08■■■□□ 2.57
COL13A1-214ENST00000522165 AK2P54819 239 aa31.08■■■□□ 2.57
COL13A1-214ENST00000522165 AK7Q96M32 723 aa31.08■■■□□ 2.57
COL13A1-214ENST00000522165 COL5A3P25940 1745 aaPredicted RBP31.07■■■□□ 2.56
COL13A1-214ENST00000522165 LDHAL6AQ6ZMR3 332 aa31.07■■■□□ 2.56
COL13A1-214ENST00000522165 SUSD4Q5VX71 490 aa31.07■■■□□ 2.56
COL13A1-214ENST00000522165 XAGE2Q96GT9 111 aa31.07■■■□□ 2.56
COL13A1-214ENST00000522165 SPEF2Q9C093 1822 aa31.06■■■□□ 2.56
COL13A1-214ENST00000522165 CHGBP05060 677 aa31.06■■■□□ 2.56
COL13A1-214ENST00000522165 MCMDC2Q4G0Z9 681 aa31.06■■■□□ 2.56
COL13A1-214ENST00000522165 CPA1P15085 419 aa31.05■■■□□ 2.56
COL13A1-214ENST00000522165 ADORA1P30542 326 aa31.05■■■□□ 2.56
COL13A1-214ENST00000522165 RNF20Q5VTR2 975 aa31.05■■■□□ 2.56
COL13A1-214ENST00000522165 USP21Q9UK80 565 aa31.05■■■□□ 2.56
COL13A1-214ENST00000522165 BAG4O95429 457 aaKnown RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms