RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CCDC152Q4G0S7 254 aa30.2■■■□□ 2.42
PVT1-212ENST00000521951 CEP85Q6P2H3 762 aa30.2■■■□□ 2.42
PVT1-212ENST00000521951 CHMP3Q9Y3E7 222 aa30.2■■■□□ 2.42
PVT1-212ENST00000521951 ATP8B2P98198 1209 aa30.19■■■□□ 2.42
PVT1-212ENST00000521951 MTX1Q13505 466 aa30.19■■■□□ 2.42
PVT1-212ENST00000521951 PCDHB15Q9Y5E8 787 aa30.19■■■□□ 2.42
PVT1-212ENST00000521951 GREM2Q9H772 168 aa30.18■■■□□ 2.42
PVT1-212ENST00000521951 FAM161AQ3B820 660 aa30.17■■■□□ 2.42
PVT1-212ENST00000521951 RPAP2Q8IXW5 612 aaPredicted RBP30.17■■■□□ 2.42
PVT1-212ENST00000521951 PPP1R1BQ9UD71 204 aaPredicted RBP30.17■■■□□ 2.42
PVT1-212ENST00000521951 CD2APQ9Y5K6 639 aa30.17■■■□□ 2.42
PVT1-212ENST00000521951 C2CD5Q86YS7 1000 aa30.17■■■□□ 2.42
PVT1-212ENST00000521951 PDZRN3Q9UPQ7 1066 aa30.17■■■□□ 2.42
PVT1-212ENST00000521951 RTL9Q8NET4 1388 aa30.16■■■□□ 2.42
PVT1-212ENST00000521951 PNMA6EA0A0J9YXQ4 647 aa30.16■■■□□ 2.42
PVT1-212ENST00000521951 H0YIN7 160 aa30.16■■■□□ 2.42
PVT1-212ENST00000521951 SRGNP10124 158 aa30.16■■■□□ 2.42
PVT1-212ENST00000521951 SIRT2Q8IXJ6 389 aa30.16■■■□□ 2.42
PVT1-212ENST00000521951 KLHL34Q8N239 644 aa30.16■■■□□ 2.42
PVT1-212ENST00000521951 COL11A2P13942 1736 aaPredicted RBP30.16■■■□□ 2.42
PVT1-212ENST00000521951 SRGAP3O43295 1099 aa30.15■■■□□ 2.42
PVT1-212ENST00000521951 CHRNA5P30532 468 aa30.15■■■□□ 2.42
PVT1-212ENST00000521951 RPGRQ92834 1020 aaKnown RBP30.15■■■□□ 2.42
PVT1-212ENST00000521951 SEC31BQ9NQW1 1179 aa30.15■■■□□ 2.42
PVT1-212ENST00000521951 TAF1P21675 1872 aa30.14■■■□□ 2.42
PVT1-212ENST00000521951 ITGA6P23229 1130 aa30.14■■■□□ 2.42
PVT1-212ENST00000521951 HOXA10P31260 410 aaPredicted RBP30.13■■■□□ 2.41
PVT1-212ENST00000521951 TGFB2P61812 414 aa30.13■■■□□ 2.41
PVT1-212ENST00000521951 IFIT5Q13325 482 aaKnown RBP30.13■■■□□ 2.41
PVT1-212ENST00000521951 CCDC57Q2TAC2 916 aa30.13■■■□□ 2.41
PVT1-212ENST00000521951 DDX46Q7L014 1031 aaKnown RBP30.13■■■□□ 2.41
PVT1-212ENST00000521951 NPR1P16066 1061 aa30.12■■■□□ 2.41
PVT1-212ENST00000521951 SSH3Q8TE77 659 aa30.12■■■□□ 2.41
PVT1-212ENST00000521951 MASTLQ96GX5 879 aa30.12■■■□□ 2.41
PVT1-212ENST00000521951 RBM17Q96I25 401 aaKnown RBP30.12■■■□□ 2.41
PVT1-212ENST00000521951 KIAA1551Q9HCM1 1747 aa30.12■■■□□ 2.41
PVT1-212ENST00000521951 ANKRD18BA2A2Z9 1011 aa30.12■■■□□ 2.41
PVT1-212ENST00000521951 RFX5P48382 616 aaPredicted RBP30.12■■■□□ 2.41
PVT1-212ENST00000521951 POLA2Q14181 598 aa30.12■■■□□ 2.41
PVT1-212ENST00000521951 A0A0G2JLW4 131 aa30.11■■■□□ 2.41
PVT1-212ENST00000521951 DPEP1P16444 411 aa30.11■■■□□ 2.41
PVT1-212ENST00000521951 ERICH6BQ5W0A0 696 aa30.11■■■□□ 2.41
PVT1-212ENST00000521951 ZNF622Q969S3 477 aaKnown RBP eCLIP30.1■■■□□ 2.412e-7■■■■□ 24.3
PVT1-212ENST00000521951 CRAMP1Q96RY5 1269 aa30.1■■■□□ 2.41
PVT1-212ENST00000521951 STYK1Q6J9G0 422 aa30.09■■■□□ 2.41
PVT1-212ENST00000521951 ZNF594Q96JF6 807 aaPredicted RBP30.09■■■□□ 2.41
PVT1-212ENST00000521951 FHDC1Q9C0D6 1143 aaPredicted RBP30.09■■■□□ 2.41
PVT1-212ENST00000521951 COL4A1P02462 1669 aa30.09■■■□□ 2.41
PVT1-212ENST00000521951 DLEC1Q9Y238 1755 aa30.08■■■□□ 2.41
PVT1-212ENST00000521951 HMMRO75330 724 aa30.08■■■□□ 2.41
PVT1-212ENST00000521951 KCNA3P22001 575 aa30.08■■■□□ 2.41
PVT1-212ENST00000521951 KLHDC4Q8TBB5 520 aa30.08■■■□□ 2.41
PVT1-212ENST00000521951 CELF1Q92879 486 aaKnown RBP30.08■■■□□ 2.41
PVT1-212ENST00000521951 LRP5O75197 1615 aa30.08■■■□□ 2.41
PVT1-212ENST00000521951 PTPN12Q05209 780 aaKnown RBP30.07■■■□□ 2.4
PVT1-212ENST00000521951 CDC5LQ99459 802 aaKnown RBP30.07■■■□□ 2.4
PVT1-212ENST00000521951 GRAPQ13588 217 aa30.06■■■□□ 2.4
PVT1-212ENST00000521951 GRAPLQ8TC17 118 aaPredicted RBP30.06■■■□□ 2.4
PVT1-212ENST00000521951 PA2G4Q9UQ80 394 aaKnown RBP30.06■■■□□ 2.4
PVT1-212ENST00000521951 ALDH1B1P30837 517 aa30.06■■■□□ 2.4
PVT1-212ENST00000521951 RPS8P62241 208 aaKnown RBP30.06■■■□□ 2.4
PVT1-212ENST00000521951 TAF7LQ5H9L4 462 aa30.06■■■□□ 2.4
PVT1-212ENST00000521951 NLGN2Q8NFZ4 835 aa30.06■■■□□ 2.4
PVT1-212ENST00000521951 ANKRD18AQ8IVF6 992 aa30.05■■■□□ 2.4
PVT1-212ENST00000521951 COPRSQ9NQ92 184 aa30.05■■■□□ 2.4
PVT1-212ENST00000521951 CNKSR1Q969H4 720 aa30.04■■■□□ 2.4
PVT1-212ENST00000521951 SPEF2Q9C093 1822 aa30.03■■■□□ 2.4
PVT1-212ENST00000521951 IGHMBP2P38935 993 aaKnown RBP30.03■■■□□ 2.4
PVT1-212ENST00000521951 HDAC1Q13547 482 aaPredicted RBP30.03■■■□□ 2.4
PVT1-212ENST00000521951 CACNA1SQ13698 1873 aa30.03■■■□□ 2.4
PVT1-212ENST00000521951 BBOX1O75936 387 aa30.02■■■□□ 2.4
PVT1-212ENST00000521951 SYT17Q9BSW7 474 aa30.02■■■□□ 2.4
PVT1-212ENST00000521951 LDHAL6AQ6ZMR3 332 aa30.01■■■□□ 2.4
PVT1-212ENST00000521951 PUS3Q9BZE2 481 aaKnown RBP30.01■■■□□ 2.4
PVT1-212ENST00000521951 RWDD1Q9H446 243 aaPredicted RBP30.01■■■□□ 2.4
PVT1-212ENST00000521951 MPHOSPH8Q99549 860 aa30.01■■■□□ 2.39
PVT1-212ENST00000521951 SIL1Q9H173 461 aa30.01■■■□□ 2.39
PVT1-212ENST00000521951 PIM2Q9P1W9 311 aa30.01■■■□□ 2.39
PVT1-212ENST00000521951 SLX4Q8IY92 1834 aa30.01■■■□□ 2.39
PVT1-212ENST00000521951 BRCA1P38398 1863 aaKnown RBP30■■■□□ 2.39
PVT1-212ENST00000521951 SURF6O75683 361 aaKnown RBP30■■■□□ 2.39
PVT1-212ENST00000521951 IGHDP01880 384 aa30■■■□□ 2.39
PVT1-212ENST00000521951 TTLL6Q8N841 843 aa30■■■□□ 2.39
PVT1-212ENST00000521951 BSDC1Q9NW68 430 aaPredicted RBP30■■■□□ 2.39
PVT1-212ENST00000521951 NOP58Q9Y2X3 529 aaKnown RBP30■■■□□ 2.39
PVT1-212ENST00000521951 EYA2O00167 538 aa29.99■■■□□ 2.39
PVT1-212ENST00000521951 LRRC24Q50LG9 513 aa29.99■■■□□ 2.39
PVT1-212ENST00000521951 PRPF40BQ6NWY9 871 aaKnown RBP29.98■■■□□ 2.39
PVT1-212ENST00000521951 CNNM1Q9NRU3 951 aa29.98■■■□□ 2.39
PVT1-212ENST00000521951 FBXO3Q9UK99 471 aa29.98■■■□□ 2.39
PVT1-212ENST00000521951 PPEF1O14829 653 aaPredicted RBP29.97■■■□□ 2.39
PVT1-212ENST00000521951 DCTPP1Q9H773 170 aa29.97■■■□□ 2.39
PVT1-212ENST00000521951 PPP4R2Q9NY27 417 aa29.97■■■□□ 2.39
PVT1-212ENST00000521951 EXOC6BQ9Y2D4 811 aa29.97■■■□□ 2.39
PVT1-212ENST00000521951 RIPOR2Q9Y4F9 1068 aa29.97■■■□□ 2.39
PVT1-212ENST00000521951 G3BP1Q13283 466 aaKnown RBP eCLIP29.96■■■□□ 2.39
PVT1-212ENST00000521951 ATG9AQ7Z3C6 839 aa29.96■■■□□ 2.39
PVT1-212ENST00000521951 CIAO1O76071 339 aa29.96■■■□□ 2.39
PVT1-212ENST00000521951 TMC4Q7Z404 712 aa29.96■■■□□ 2.39
PVT1-212ENST00000521951 WWC3Q9ULE0 1092 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms