RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 TSPYL6Q8N831 410 aa33.42■■■□□ 2.94
LAPTM4B-203ENST00000521545 EPHX2P34913 555 aa33.41■■■□□ 2.94
LAPTM4B-203ENST00000521545 NCBP3Q53F19 620 aaKnown RBP33.41■■■□□ 2.94
LAPTM4B-203ENST00000521545 MYD88Q99836 296 aa33.41■■■□□ 2.94
LAPTM4B-203ENST00000521545 IRS4O14654 1257 aaPredicted RBP33.4■■■□□ 2.94
LAPTM4B-203ENST00000521545 HSP90B1P14625 803 aaKnown RBP33.4■■■□□ 2.94
LAPTM4B-203ENST00000521545 SF3B3Q15393 1217 aaKnown RBP33.4■■■□□ 2.94
LAPTM4B-203ENST00000521545 AOC3Q16853 763 aa33.4■■■□□ 2.94
LAPTM4B-203ENST00000521545 PNMA8AQ86V59 439 aaPredicted RBP33.4■■■□□ 2.94
LAPTM4B-203ENST00000521545 RTFDC1Q9BY42 306 aaPredicted RBP33.4■■■□□ 2.94
LAPTM4B-203ENST00000521545 CLEC11AQ9Y240 323 aa33.4■■■□□ 2.94
LAPTM4B-203ENST00000521545 STK31Q9BXU1 1019 aa33.39■■■□□ 2.94
LAPTM4B-203ENST00000521545 IL16Q14005 1332 aa33.38■■■□□ 2.93
LAPTM4B-203ENST00000521545 LMOD1P29536 600 aaPredicted RBP33.38■■■□□ 2.93
LAPTM4B-203ENST00000521545 ZBTB38Q8NAP3 1195 aaPredicted RBP33.38■■■□□ 2.93
LAPTM4B-203ENST00000521545 COL4A5P29400 1685 aa33.38■■■□□ 2.93
LAPTM4B-203ENST00000521545 CCDC191Q8NCU4 936 aa33.37■■■□□ 2.93
LAPTM4B-203ENST00000521545 DDX60Q8IY21 1712 aaKnown RBP33.36■■■□□ 2.93
LAPTM4B-203ENST00000521545 TWISTNBQ3B726 338 aaPredicted RBP33.35■■■□□ 2.93
LAPTM4B-203ENST00000521545 JMYQ8N9B5 988 aa33.35■■■□□ 2.93
LAPTM4B-203ENST00000521545 METTL22Q9BUU2 404 aaPredicted RBP33.35■■■□□ 2.93
LAPTM4B-203ENST00000521545 CWC25Q9NXE8 425 aaPredicted RBP33.34■■■□□ 2.93
LAPTM4B-203ENST00000521545 ZNRF3Q9ULT6 936 aa33.34■■■□□ 2.93
LAPTM4B-203ENST00000521545 CELF1Q92879 486 aaKnown RBP33.33■■■□□ 2.93
LAPTM4B-203ENST00000521545 SALL2Q9Y467 1007 aaPredicted RBP33.33■■■□□ 2.93
LAPTM4B-203ENST00000521545 PCCAP05165 728 aaPredicted RBP33.32■■■□□ 2.92
LAPTM4B-203ENST00000521545 KIAA2012Q0VF49 1180 aa33.32■■■□□ 2.92
LAPTM4B-203ENST00000521545 CREBZFQ9NS37 354 aa33.32■■■□□ 2.92
LAPTM4B-203ENST00000521545 MAP3K2Q9Y2U5 619 aa33.32■■■□□ 2.92
LAPTM4B-203ENST00000521545 TAF1P21675 1872 aa33.31■■■□□ 2.92
LAPTM4B-203ENST00000521545 KSR2Q6VAB6 950 aa33.31■■■□□ 2.92
LAPTM4B-203ENST00000521545 WDR63Q8IWG1 891 aa33.3■■■□□ 2.92
LAPTM4B-203ENST00000521545 RPS8P62241 208 aaKnown RBP33.29■■■□□ 2.92
LAPTM4B-203ENST00000521545 NSFL1CQ9UNZ2 370 aaKnown RBP33.29■■■□□ 2.92
LAPTM4B-203ENST00000521545 PI4KAP2A4QPH2 592 aa33.28■■■□□ 2.92
LAPTM4B-203ENST00000521545 SCNN1DP51172 638 aa33.28■■■□□ 2.92
LAPTM4B-203ENST00000521545 CXCL9Q07325 125 aa33.28■■■□□ 2.92
LAPTM4B-203ENST00000521545 NEXNQ0ZGT2 675 aa33.28■■■□□ 2.92
LAPTM4B-203ENST00000521545 PI4KAP1Q8N8J0 262 aa33.28■■■□□ 2.92
LAPTM4B-203ENST00000521545 PASKQ96RG2 1323 aa33.28■■■□□ 2.92
LAPTM4B-203ENST00000521545 PDE8AO60658 829 aa33.27■■■□□ 2.92
LAPTM4B-203ENST00000521545 SLC4A2P04920 1241 aa33.27■■■□□ 2.92
LAPTM4B-203ENST00000521545 EPS15P42566 896 aa33.27■■■□□ 2.92
LAPTM4B-203ENST00000521545 CCDC152Q4G0S7 254 aa33.27■■■□□ 2.92
LAPTM4B-203ENST00000521545 ITGBL1O95965 494 aaPredicted RBP33.26■■■□□ 2.91
LAPTM4B-203ENST00000521545 CNTROBQ8N137 903 aa33.26■■■□□ 2.91
LAPTM4B-203ENST00000521545 JARID2Q92833 1246 aaPredicted RBP33.26■■■□□ 2.91
LAPTM4B-203ENST00000521545 TNIP1Q15025 636 aa33.25■■■□□ 2.91
LAPTM4B-203ENST00000521545 WASHC4Q2M389 1173 aa33.25■■■□□ 2.91
LAPTM4B-203ENST00000521545 MAP1SQ66K74 1059 aaPredicted RBP33.25■■■□□ 2.91
LAPTM4B-203ENST00000521545 CIAPIN1Q6FI81 312 aa33.25■■■□□ 2.91
LAPTM4B-203ENST00000521545 FAM9BQ8IZU0 186 aa33.25■■■□□ 2.91
LAPTM4B-203ENST00000521545 FANCIQ9NVI1 1328 aa33.25■■■□□ 2.91
LAPTM4B-203ENST00000521545 C6orf229H3BNL8 230 aa33.24■■■□□ 2.91
LAPTM4B-203ENST00000521545 USP50Q70EL3 339 aaPredicted RBP33.24■■■□□ 2.91
LAPTM4B-203ENST00000521545 SEC31BQ9NQW1 1179 aa33.23■■■□□ 2.91
LAPTM4B-203ENST00000521545 LRRC37AA6NMS7 1700 aa33.22■■■□□ 2.91
LAPTM4B-203ENST00000521545 ADAMTSL1Q8N6G6 1762 aa33.22■■■□□ 2.91
LAPTM4B-203ENST00000521545 RAD17O75943 681 aa33.22■■■□□ 2.91
LAPTM4B-203ENST00000521545 GPSM2P81274 684 aa33.22■■■□□ 2.91
LAPTM4B-203ENST00000521545 EYA3Q99504 573 aa33.22■■■□□ 2.91
LAPTM4B-203ENST00000521545 GPRC5DQ9NZD1 345 aa33.22■■■□□ 2.91
LAPTM4B-203ENST00000521545 TMEM88BA6NKF7 163 aa33.21■■■□□ 2.91
LAPTM4B-203ENST00000521545 IGKV5-2P06315 115 aa33.21■■■□□ 2.91
LAPTM4B-203ENST00000521545 G2E3Q7L622 706 aa33.21■■■□□ 2.91
LAPTM4B-203ENST00000521545 BCL2L13Q9BXK5 485 aa33.21■■■□□ 2.91
LAPTM4B-203ENST00000521545 CDHR2Q9BYE9 1310 aa33.21■■■□□ 2.91
LAPTM4B-203ENST00000521545 GMPSP49915 693 aaPredicted RBP33.2■■■□□ 2.91
LAPTM4B-203ENST00000521545 ADARB2Q9NS39 739 aaKnown RBP33.2■■■□□ 2.91
LAPTM4B-203ENST00000521545 MKRN1Q9UHC7 482 aaKnown RBP33.2■■■□□ 2.91
LAPTM4B-203ENST00000521545 LTBP1Q14766 1721 aa33.19■■■□□ 2.9
LAPTM4B-203ENST00000521545 RIMBP2O15034 1052 aa33.19■■■□□ 2.9
LAPTM4B-203ENST00000521545 CCDC85AQ96PX6 553 aaPredicted RBP33.19■■■□□ 2.9
LAPTM4B-203ENST00000521545 POLLQ9UGP5 575 aa33.19■■■□□ 2.9
LAPTM4B-203ENST00000521545 DUOX1Q9NRD9 1551 aa33.18■■■□□ 2.9
LAPTM4B-203ENST00000521545 FLIIQ13045 1269 aa33.18■■■□□ 2.9
LAPTM4B-203ENST00000521545 EXOSC9Q06265 439 aaKnown RBP33.17■■■□□ 2.9
LAPTM4B-203ENST00000521545 ANKIB1Q9P2G1 1089 aa33.17■■■□□ 2.9
LAPTM4B-203ENST00000521545 YDJCA8MPS7 323 aa33.16■■■□□ 2.9
LAPTM4B-203ENST00000521545 NEURL1BA8MQ27 555 aa33.16■■■□□ 2.9
LAPTM4B-203ENST00000521545 VAMP4O75379 141 aa33.16■■■□□ 2.9
LAPTM4B-203ENST00000521545 FKBP5Q13451 457 aaPredicted RBP33.16■■■□□ 2.9
LAPTM4B-203ENST00000521545 CWF19L2Q2TBE0 894 aaKnown RBP33.16■■■□□ 2.9
LAPTM4B-203ENST00000521545 ANKRD18AQ8IVF6 992 aa33.16■■■□□ 2.9
LAPTM4B-203ENST00000521545 TBC1D16Q8TBP0 767 aa33.16■■■□□ 2.9
LAPTM4B-203ENST00000521545 CTSWP56202 376 aa33.15■■■□□ 2.9
LAPTM4B-203ENST00000521545 IFFO2Q5TF58 517 aa33.15■■■□□ 2.9
LAPTM4B-203ENST00000521545 ZC3H12CQ9C0D7 883 aaKnown RBP33.15■■■□□ 2.9
LAPTM4B-203ENST00000521545 DBNDD1Q9H9R9 158 aa33.15■■■□□ 2.9
LAPTM4B-203ENST00000521545 PODXL2Q9NZ53 605 aa33.15■■■□□ 2.9
LAPTM4B-203ENST00000521545 COL4A1P02462 1669 aa33.14■■■□□ 2.9
LAPTM4B-203ENST00000521545 MYH16Q9H6N6 1097 aa33.14■■■□□ 2.9
LAPTM4B-203ENST00000521545 CDC5LQ99459 802 aaKnown RBP33.13■■■□□ 2.89
LAPTM4B-203ENST00000521545 GGA1Q9UJY5 639 aa33.13■■■□□ 2.89
LAPTM4B-203ENST00000521545 CNTNAP1P78357 1384 aa33.12■■■□□ 2.89
LAPTM4B-203ENST00000521545 G3V3G9 751 aa33.12■■■□□ 2.89
LAPTM4B-203ENST00000521545 UFL1O94874 794 aa33.12■■■□□ 2.89
LAPTM4B-203ENST00000521545 DCAF8Q5TAQ9 597 aa33.12■■■□□ 2.89
LAPTM4B-203ENST00000521545 DNAAF4Q8WXU2 420 aa33.12■■■□□ 2.89
LAPTM4B-203ENST00000521545 H7C1D1 291 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms