RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 EGFRP00533 1210 aa9.03□□□□□ -0.96
SKP1-208ENST00000521216 MAP2K3P46734 347 aa9.03□□□□□ -0.96
SKP1-208ENST00000521216 NIF3L1Q9GZT8 377 aa9.03□□□□□ -0.96
SKP1-208ENST00000521216 C11orf16Q9NQ32 467 aa9.03□□□□□ -0.96
SKP1-208ENST00000521216 TMEM63CQ9P1W3 806 aa9.03□□□□□ -0.96
SKP1-208ENST00000521216 ZFATQ9P243 1243 aa9.03□□□□□ -0.96
SKP1-208ENST00000521216 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
SKP1-208ENST00000521216 PDE12Q6L8Q7 609 aaKnown RBP9.02□□□□□ -0.97
SKP1-208ENST00000521216 ASB16Q96NS5 453 aa9.02□□□□□ -0.97
SKP1-208ENST00000521216 CCDC9Q9Y3X0 531 aaKnown RBP9.02□□□□□ -0.97
SKP1-208ENST00000521216 ANKRD33BA6NCL7 494 aa9.01□□□□□ -0.97
SKP1-208ENST00000521216 NEURL1BA8MQ27 555 aa9.01□□□□□ -0.97
SKP1-208ENST00000521216 ADAMTS2O95450 1211 aa9.01□□□□□ -0.97
SKP1-208ENST00000521216 SRSF11Q05519 484 aaKnown RBP9.01□□□□□ -0.97
SKP1-208ENST00000521216 ZNF468Q5VIY5 522 aaPredicted RBP9.01□□□□□ -0.97
SKP1-208ENST00000521216 DMRTB1Q96MA1 342 aa9.01□□□□□ -0.97
SKP1-208ENST00000521216 FAM129BQ96TA1 746 aa9.01□□□□□ -0.97
SKP1-208ENST00000521216 ABI2Q9NYB9 513 aaPredicted RBP9.01□□□□□ -0.97
SKP1-208ENST00000521216 GPR182O15218 404 aa9□□□□□ -0.97
SKP1-208ENST00000521216 MMP20O60882 483 aa9□□□□□ -0.97
SKP1-208ENST00000521216 PLCB3Q01970 1234 aa9□□□□□ -0.97
SKP1-208ENST00000521216 UBE2OQ9C0C9 1292 aaKnown RBP9□□□□□ -0.97
SKP1-208ENST00000521216 FOXD3Q9UJU5 478 aaPredicted RBP9□□□□□ -0.97
SKP1-208ENST00000521216 GGA1Q9UJY5 639 aa9□□□□□ -0.97
SKP1-208ENST00000521216 PHACTR2O75167 634 aa8.99□□□□□ -0.97
SKP1-208ENST00000521216 TNFRSF21O75509 655 aa8.99□□□□□ -0.97
SKP1-208ENST00000521216 PSAPP07602 524 aa8.99□□□□□ -0.97
SKP1-208ENST00000521216 ARAFP10398 606 aa8.99□□□□□ -0.97
SKP1-208ENST00000521216 ADH6P28332 368 aa8.99□□□□□ -0.97
SKP1-208ENST00000521216 XKR5Q6UX68 686 aa8.99□□□□□ -0.97
SKP1-208ENST00000521216 OXCT2Q9BYC2 517 aaPredicted RBP8.99□□□□□ -0.97
SKP1-208ENST00000521216 EFCC1Q9HA90 598 aa8.99□□□□□ -0.97
SKP1-208ENST00000521216 MLLT1Q03111 559 aaPredicted RBP8.98□□□□□ -0.97
SKP1-208ENST00000521216 ORC1Q13415 861 aa8.98□□□□□ -0.97
SKP1-208ENST00000521216 DNAJC14Q6Y2X3 702 aaPredicted RBP8.98□□□□□ -0.97
SKP1-208ENST00000521216 DHX32Q7L7V1 743 aaKnown RBP8.98□□□□□ -0.97
SKP1-208ENST00000521216 C1orf127Q8N9H9 656 aa8.98□□□□□ -0.97
SKP1-208ENST00000521216 CNTN3Q9P232 1028 aa8.98□□□□□ -0.97
SKP1-208ENST00000521216 KLF15Q9UIH9 416 aa8.98□□□□□ -0.97
SKP1-208ENST00000521216 PHF20L1A8MW92 1017 aa8.97□□□□□ -0.97
SKP1-208ENST00000521216 SIN3BO75182 1162 aa8.97□□□□□ -0.97
SKP1-208ENST00000521216 MAP3K6O95382 1288 aa8.97□□□□□ -0.97
SKP1-208ENST00000521216 NEFLP07196 543 aa8.97□□□□□ -0.97
SKP1-208ENST00000521216 CES1P23141 567 aa8.97□□□□□ -0.97
SKP1-208ENST00000521216 MAPK8P45983 427 aa8.97□□□□□ -0.97
SKP1-208ENST00000521216 SNX29Q8TEQ0 813 aa8.97□□□□□ -0.97
SKP1-208ENST00000521216 NSUN5Q96P11 429 aaKnown RBP8.97□□□□□ -0.97
SKP1-208ENST00000521216 TLR7Q9NYK1 1049 aaKnown RBP8.97□□□□□ -0.97
SKP1-208ENST00000521216 TREHO43280 583 aa8.96□□□□□ -0.98
SKP1-208ENST00000521216 CYP2E1P05181 493 aaPredicted RBP8.96□□□□□ -0.98
SKP1-208ENST00000521216 PLAURQ03405 335 aa8.96□□□□□ -0.98
SKP1-208ENST00000521216 HFE2Q6ZVN8 426 aa8.96□□□□□ -0.98
SKP1-208ENST00000521216 GOLGA6L1Q8N7Z2 621 aa8.96□□□□□ -0.98
SKP1-208ENST00000521216 ACDQ96AP0 544 aa8.96□□□□□ -0.98
SKP1-208ENST00000521216 AVENQ9NQS1 362 aaPredicted RBP8.96□□□□□ -0.98
SKP1-208ENST00000521216 DNAJB12Q9NXW2 375 aaKnown RBP8.96□□□□□ -0.98
SKP1-208ENST00000521216 KANSL3Q9P2N6 904 aa8.96□□□□□ -0.98
SKP1-208ENST00000521216 GDF2Q9UK05 429 aaPredicted RBP8.96□□□□□ -0.98
SKP1-208ENST00000521216 IGHA2P01877 340 aa8.95□□□□□ -0.98
SKP1-208ENST00000521216 FCHSD1Q86WN1 690 aa8.95□□□□□ -0.98
SKP1-208ENST00000521216 OR13H1Q8NG92 308 aa8.95□□□□□ -0.98
SKP1-208ENST00000521216 POLR3DP05423 398 aaPredicted RBP8.94□□□□□ -0.98
SKP1-208ENST00000521216 ALAS2P22557 587 aa8.94□□□□□ -0.98
SKP1-208ENST00000521216 NCAPG2Q86XI2 1143 aa8.94□□□□□ -0.98
SKP1-208ENST00000521216 GALNT6Q8NCL4 622 aa8.94□□□□□ -0.98
SKP1-208ENST00000521216 ALKBH8Q96BT7 664 aaKnown RBP8.94□□□□□ -0.98
SKP1-208ENST00000521216 ZFYVE28Q9HCC9 887 aa8.94□□□□□ -0.98
SKP1-208ENST00000521216 J3QW42 95 aa8.93□□□□□ -0.98
SKP1-208ENST00000521216 EIF1AYO14602 144 aaKnown RBP8.93□□□□□ -0.98
SKP1-208ENST00000521216 EREGO14944 169 aa8.93□□□□□ -0.98
SKP1-208ENST00000521216 CPNE3O75131 537 aaKnown RBP8.93□□□□□ -0.98
SKP1-208ENST00000521216 ADH7P40394 386 aa8.93□□□□□ -0.98
SKP1-208ENST00000521216 DSC3Q14574 896 aa8.93□□□□□ -0.98
SKP1-208ENST00000521216 USPL1Q5W0Q7 1092 aa8.93□□□□□ -0.98
SKP1-208ENST00000521216 PMEPA1Q969W9 287 aa8.93□□□□□ -0.98
SKP1-208ENST00000521216 CSRNP1Q96S65 589 aa8.93□□□□□ -0.98
SKP1-208ENST00000521216 CHRDQ9H2X0 955 aa8.93□□□□□ -0.98
SKP1-208ENST00000521216 PNMA6FA0A0J9YX94 578 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 ZBTB42B2RXF5 422 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 P4HBP07237 508 aaKnown RBP8.92□□□□□ -0.98
SKP1-208ENST00000521216 SLURP2P0DP57 97 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 CPB1P15086 417 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 ERCC3P19447 782 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 HYAL2Q12891 473 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 PCSK7Q16549 785 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 LCE2AQ5TA79 106 aaPredicted RBP8.92□□□□□ -0.98
SKP1-208ENST00000521216 LYPD4Q6UWN0 246 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 SLCO4C1Q6ZQN7 724 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 FAM35AQ86V20 835 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 NPAS4Q8IUM7 802 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 EDARADDQ8WWZ3 215 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 TNFRSF25Q93038 417 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 SPACA7Q96KW9 195 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 AMOTL2Q9Y2J4 779 aa8.92□□□□□ -0.98
SKP1-208ENST00000521216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.92□□□□□ -0.98
SKP1-208ENST00000521216 ELOA3CA0A087WX78 387 aaPredicted RBP8.91□□□□□ -0.98
SKP1-208ENST00000521216 LOC102724428A0A0B4J2F2 783 aa8.91□□□□□ -0.98
SKP1-208ENST00000521216 ELOA3DA6NLF2 546 aaPredicted RBP8.91□□□□□ -0.98
SKP1-208ENST00000521216 CELA2BP08218 269 aaPredicted RBP8.91□□□□□ -0.98
SKP1-208ENST00000521216 BCRP11274 1271 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms