RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 PDE8AO60658 829 aa28.51■■■□□ 2.15
SLIT3-204ENST00000518140 IL15P40933 162 aaPredicted RBP28.51■■■□□ 2.15
SLIT3-204ENST00000518140 IFIT5Q13325 482 aaKnown RBP28.51■■■□□ 2.15
SLIT3-204ENST00000518140 FAM196AQ6ZSG2 479 aa28.5■■■□□ 2.15
SLIT3-204ENST00000518140 DBNDD2Q9BQY9 259 aa28.5■■■□□ 2.15
SLIT3-204ENST00000518140 ESYT1Q9BSJ8 1104 aa28.5■■■□□ 2.15
SLIT3-204ENST00000518140 BRWD3Q6RI45 1802 aa28.5■■■□□ 2.15
SLIT3-204ENST00000518140 ITGA6P23229 1130 aa28.5■■■□□ 2.15
SLIT3-204ENST00000518140 BCL2L12Q9HB09 334 aa28.5■■■□□ 2.15
SLIT3-204ENST00000518140 SRP68Q9UHB9 627 aaKnown RBP28.5■■■□□ 2.15
SLIT3-204ENST00000518140 CIAO1O76071 339 aa28.49■■■□□ 2.15
SLIT3-204ENST00000518140 TRIM37O94972 964 aa28.49■■■□□ 2.15
SLIT3-204ENST00000518140 IL25Q9H293 177 aa28.49■■■□□ 2.15
SLIT3-204ENST00000518140 BOLA2Q9H3K6 86 aa28.49■■■□□ 2.15
SLIT3-204ENST00000518140 SH3TC1Q8TE82 1336 aa28.49■■■□□ 2.15
SLIT3-204ENST00000518140 TIMM10P62072 90 aa28.49■■■□□ 2.15
SLIT3-204ENST00000518140 PARP10Q53GL7 1025 aa28.49■■■□□ 2.15
SLIT3-204ENST00000518140 CNTROBQ8N137 903 aa28.49■■■□□ 2.15
SLIT3-204ENST00000518140 NTSR2O95665 410 aa28.48■■■□□ 2.15
SLIT3-204ENST00000518140 RBM6P78332 1123 aaKnown RBP28.48■■■□□ 2.15
SLIT3-204ENST00000518140 ZNF772Q68DY9 489 aaPredicted RBP28.48■■■□□ 2.15
SLIT3-204ENST00000518140 CLEC4GQ6UXB4 293 aa28.48■■■□□ 2.15
SLIT3-204ENST00000518140 ZNF652Q9Y2D9 606 aa28.47■■■□□ 2.15
SLIT3-204ENST00000518140 TAF7LQ5H9L4 462 aa28.47■■■□□ 2.15
SLIT3-204ENST00000518140 USPL1Q5W0Q7 1092 aa28.47■■■□□ 2.15
SLIT3-204ENST00000518140 LY75O60449 1722 aa28.47■■■□□ 2.15
SLIT3-204ENST00000518140 BICDL1Q6ZP65 573 aa28.46■■■□□ 2.15
SLIT3-204ENST00000518140 NEUROD6Q96NK8 337 aa28.46■■■□□ 2.15
SLIT3-204ENST00000518140 RTCBQ9Y3I0 505 aaKnown RBP28.46■■■□□ 2.15
SLIT3-204ENST00000518140 TBC1D9BQ66K14 1250 aa28.45■■■□□ 2.14
SLIT3-204ENST00000518140 ARHGEF1Q92888 912 aaKnown RBP28.45■■■□□ 2.14
SLIT3-204ENST00000518140 NARFQ9UHQ1 456 aa28.45■■■□□ 2.14
SLIT3-204ENST00000518140 TBC1D2Q9BYX2 928 aa28.44■■■□□ 2.14
SLIT3-204ENST00000518140 ANKRD18BA2A2Z9 1011 aa28.44■■■□□ 2.14
SLIT3-204ENST00000518140 REC8O95072 547 aa28.44■■■□□ 2.14
SLIT3-204ENST00000518140 GPR108Q9NPR9 543 aa28.44■■■□□ 2.14
SLIT3-204ENST00000518140 DAXXQ9UER7 740 aaPredicted RBP28.44■■■□□ 2.14
SLIT3-204ENST00000518140 EDC3Q96F86 508 aaKnown RBP28.43■■■□□ 2.14
SLIT3-204ENST00000518140 CEP126Q9P2H0 1117 aa28.43■■■□□ 2.14
SLIT3-204ENST00000518140 RIPOR2Q9Y4F9 1068 aa28.43■■■□□ 2.14
SLIT3-204ENST00000518140 NDUFB9Q9Y6M9 179 aa28.43■■■□□ 2.14
SLIT3-204ENST00000518140 BCORQ6W2J9 1755 aa28.42■■■□□ 2.14
SLIT3-204ENST00000518140 EIF5BO60841 1220 aaKnown RBP28.42■■■□□ 2.14
SLIT3-204ENST00000518140 PHF14O94880 888 aa28.42■■■□□ 2.14
SLIT3-204ENST00000518140 ATP5JP18859 108 aa28.42■■■□□ 2.14
SLIT3-204ENST00000518140 LDHAL6AQ6ZMR3 332 aa28.42■■■□□ 2.14
SLIT3-204ENST00000518140 EVI5LQ96CN4 794 aa28.42■■■□□ 2.14
SLIT3-204ENST00000518140 TAF1LQ8IZX4 1826 aa28.41■■■□□ 2.14
SLIT3-204ENST00000518140 AK7Q96M32 723 aa28.41■■■□□ 2.14
SLIT3-204ENST00000518140 FBXO3Q9UK99 471 aa28.41■■■□□ 2.14
SLIT3-204ENST00000518140 A0A1B0GUL7 405 aa28.41■■■□□ 2.14
SLIT3-204ENST00000518140 ZPR1O75312 459 aa28.4■■■□□ 2.14
SLIT3-204ENST00000518140 ERFEQ4G0M1 354 aa28.4■■■□□ 2.14
SLIT3-204ENST00000518140 SEC31BQ9NQW1 1179 aa28.4■■■□□ 2.14
SLIT3-204ENST00000518140 CWC27Q6UX04 472 aaKnown RBP28.39■■■□□ 2.14
SLIT3-204ENST00000518140 MYH3P11055 1940 aa28.39■■■□□ 2.14
SLIT3-204ENST00000518140 AK9Q5TCS8 1911 aa28.39■■■□□ 2.14
SLIT3-204ENST00000518140 BECN1Q14457 450 aa28.39■■■□□ 2.13
SLIT3-204ENST00000518140 ANO2Q9NQ90 1003 aa28.39■■■□□ 2.13
SLIT3-204ENST00000518140 ZNF609O15014 1411 aa28.38■■■□□ 2.13
SLIT3-204ENST00000518140 C4BP0C0L5 1744 aa28.38■■■□□ 2.13
SLIT3-204ENST00000518140 C3orf67Q6ZVT6 689 aa28.38■■■□□ 2.13
SLIT3-204ENST00000518140 CNNM1Q9NRU3 951 aa28.38■■■□□ 2.13
SLIT3-204ENST00000518140 SGSM2O43147 1006 aa28.37■■■□□ 2.13
SLIT3-204ENST00000518140 ADORA1P30542 326 aa28.37■■■□□ 2.13
SLIT3-204ENST00000518140 PROM2Q8N271 834 aa28.37■■■□□ 2.13
SLIT3-204ENST00000518140 METTL24Q5JXM2 366 aa28.36■■■□□ 2.13
SLIT3-204ENST00000518140 TRAPPC3LQ5T215 181 aa28.36■■■□□ 2.13
SLIT3-204ENST00000518140 RIC1Q4ADV7 1423 aa28.36■■■□□ 2.13
SLIT3-204ENST00000518140 RXRBP28702 533 aa28.35■■■□□ 2.13
SLIT3-204ENST00000518140 DIAPH3Q9NSV4 1193 aa28.35■■■□□ 2.13
SLIT3-204ENST00000518140 RGS17Q9UGC6 210 aaPredicted RBP28.35■■■□□ 2.13
SLIT3-204ENST00000518140 DDX60Q8IY21 1712 aaKnown RBP28.35■■■□□ 2.13
SLIT3-204ENST00000518140 RGL2O15211 777 aa28.34■■■□□ 2.13
SLIT3-204ENST00000518140 RFC4P35249 363 aa28.34■■■□□ 2.13
SLIT3-204ENST00000518140 DNAJC2Q99543 621 aaKnown RBP28.34■■■□□ 2.13
SLIT3-204ENST00000518140 HAUS7Q99871 368 aa28.34■■■□□ 2.13
SLIT3-204ENST00000518140 SCN7AQ01118 1682 aa28.34■■■□□ 2.13
SLIT3-204ENST00000518140 CD2BP2O95400 341 aaKnown RBP28.34■■■□□ 2.13
SLIT3-204ENST00000518140 SETDB2Q96T68 719 aa28.34■■■□□ 2.13
SLIT3-204ENST00000518140 CCDC152Q4G0S7 254 aa28.33■■■□□ 2.13
SLIT3-204ENST00000518140 VGLL2Q8N8G2 317 aa28.33■■■□□ 2.13
SLIT3-204ENST00000518140 XAGE2Q96GT9 111 aa28.33■■■□□ 2.13
SLIT3-204ENST00000518140 FAM227BQ96M60 508 aa28.33■■■□□ 2.13
SLIT3-204ENST00000518140 AKAP2Q9Y2D5 859 aa28.33■■■□□ 2.13
SLIT3-204ENST00000518140 CCDC24Q8N4L8 307 aa28.33■■■□□ 2.13
SLIT3-204ENST00000518140 HELBQ8NG08 1087 aaPredicted RBP28.33■■■□□ 2.13
SLIT3-204ENST00000518140 FSD1Q9BTV5 496 aa28.33■■■□□ 2.13
SLIT3-204ENST00000518140 SLC27A3Q5K4L6 730 aa28.32■■■□□ 2.12
SLIT3-204ENST00000518140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.31■■■□□ 2.12
SLIT3-204ENST00000518140 CHGBP05060 677 aa28.31■■■□□ 2.12
SLIT3-204ENST00000518140 NMIQ13287 307 aaPredicted RBP28.31■■■□□ 2.12
SLIT3-204ENST00000518140 PALD1Q9ULE6 856 aa28.31■■■□□ 2.12
SLIT3-204ENST00000518140 ATP2B3Q16720 1220 aa28.3■■■□□ 2.12
SLIT3-204ENST00000518140 TXNRD1Q16881 649 aa28.3■■■□□ 2.12
SLIT3-204ENST00000518140 DDX46Q7L014 1031 aaKnown RBP28.3■■■□□ 2.12
SLIT3-204ENST00000518140 LSG1Q9H089 658 aaKnown RBP28.3■■■□□ 2.12
SLIT3-204ENST00000518140 ABCC12Q96J65 1359 aa28.3■■■□□ 2.12
SLIT3-204ENST00000518140 GTF2E1P29083 439 aaPredicted RBP28.3■■■□□ 2.12
SLIT3-204ENST00000518140 HSP90B1P14625 803 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms