RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 NLRP13Q86W25 1043 aa11.34□□□□□ -0.59
NPM1-204ENST00000517671 RNF135Q8IUD6 432 aa11.34□□□□□ -0.59
NPM1-204ENST00000517671 KLF16Q9BXK1 252 aaPredicted RBP11.34□□□□□ -0.59
NPM1-204ENST00000517671 ALG2Q9H553 416 aa11.34□□□□□ -0.59
NPM1-204ENST00000517671 ZFAND3Q9H8U3 227 aa11.34□□□□□ -0.59
NPM1-204ENST00000517671 BRD4O60885 1362 aaPredicted RBP11.33□□□□□ -0.6
NPM1-204ENST00000517671 KIAA0232Q92628 1395 aa11.33□□□□□ -0.6
NPM1-204ENST00000517671 BRWD3Q6RI45 1802 aa11.33□□□□□ -0.6
NPM1-204ENST00000517671 PLSCR1O15162 318 aa11.33□□□□□ -0.6
NPM1-204ENST00000517671 TRAK2O60296 914 aa11.33□□□□□ -0.6
NPM1-204ENST00000517671 FAM182BQ5T319 152 aa11.33□□□□□ -0.6
NPM1-204ENST00000517671 TMPRSS4Q9NRS4 437 aa11.33□□□□□ -0.6
NPM1-204ENST00000517671 PLCH1Q4KWH8 1693 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 NINLQ9Y2I6 1382 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 RGPD1P0DJD0 1748 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 ATP7BP35670 1465 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 TULP4Q9NRJ4 1543 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 UPP2O95045 317 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
NPM1-204ENST00000517671 ABTB2Q8N961 1025 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 DCAF11Q8TEB1 546 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
NPM1-204ENST00000517671 PCDHB11Q9Y5F2 797 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 PRR36Q9H6K5 1346 aa11.32□□□□□ -0.6
NPM1-204ENST00000517671 CPDO75976 1380 aa11.31□□□□□ -0.6
NPM1-204ENST00000517671 WIPF1O43516 503 aa11.31□□□□□ -0.6
NPM1-204ENST00000517671 USP35Q9P2H5 1018 aa11.31□□□□□ -0.6
NPM1-204ENST00000517671 STK17AQ9UEE5 414 aa11.31□□□□□ -0.6
NPM1-204ENST00000517671 IFT172Q9UG01 1749 aa11.3□□□□□ -0.6
NPM1-204ENST00000517671 CHRNA2Q15822 529 aa11.3□□□□□ -0.6
NPM1-204ENST00000517671 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
NPM1-204ENST00000517671 CALR3Q96L12 384 aaKnown RBP11.3□□□□□ -0.6
NPM1-204ENST00000517671 CDK19Q9BWU1 502 aa11.3□□□□□ -0.6
NPM1-204ENST00000517671 POLR3AO14802 1390 aaPredicted RBP11.3□□□□□ -0.6
NPM1-204ENST00000517671 SCARF1Q14162 830 aa11.29□□□□□ -0.6
NPM1-204ENST00000517671 DOLKQ9UPQ8 538 aa11.29□□□□□ -0.6
NPM1-204ENST00000517671 THSD7AQ9UPZ6 1657 aa11.28□□□□□ -0.6
NPM1-204ENST00000517671 SSH2Q76I76 1423 aa11.28□□□□□ -0.6
NPM1-204ENST00000517671 ACEP12821 1306 aa11.28□□□□□ -0.6
NPM1-204ENST00000517671 GCP02774 474 aa11.28□□□□□ -0.6
NPM1-204ENST00000517671 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
NPM1-204ENST00000517671 PHTF2Q8N3S3 785 aa11.28□□□□□ -0.6
NPM1-204ENST00000517671 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
NPM1-204ENST00000517671 CYLDQ9NQC7 956 aa11.28□□□□□ -0.6
NPM1-204ENST00000517671 NRAPQ86VF7 1730 aa11.27□□□□□ -0.6
NPM1-204ENST00000517671 ADGRB1O14514 1584 aa11.27□□□□□ -0.61
NPM1-204ENST00000517671 MYCP01106 439 aaPredicted RBP11.27□□□□□ -0.61
NPM1-204ENST00000517671 MAP7D1Q3KQU3 841 aa11.27□□□□□ -0.61
NPM1-204ENST00000517671 CC2D2BQ6DHV5 1058 aa11.27□□□□□ -0.61
NPM1-204ENST00000517671 MRPL14Q6P1L8 145 aaKnown RBP11.27□□□□□ -0.61
NPM1-204ENST00000517671 LARP1Q6PKG0 1096 aaKnown RBP11.27□□□□□ -0.61
NPM1-204ENST00000517671 GLMNQ92990 594 aa11.27□□□□□ -0.61
NPM1-204ENST00000517671 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
NPM1-204ENST00000517671 USP4Q13107 963 aa11.26□□□□□ -0.61
NPM1-204ENST00000517671 CBLBQ13191 982 aa11.26□□□□□ -0.61
NPM1-204ENST00000517671 DDB1Q16531 1140 aa11.26□□□□□ -0.61
NPM1-204ENST00000517671 CCDC85AQ96PX6 553 aaPredicted RBP11.26□□□□□ -0.61
NPM1-204ENST00000517671 TSEN34Q9BSV6 310 aaKnown RBP11.26□□□□□ -0.61
NPM1-204ENST00000517671 ALS2Q96Q42 1657 aa11.26□□□□□ -0.61
NPM1-204ENST00000517671 ABCA3Q99758 1704 aa11.25□□□□□ -0.61
NPM1-204ENST00000517671 USP19O94966 1318 aa11.25□□□□□ -0.61
NPM1-204ENST00000517671 SKIP12755 728 aa11.25□□□□□ -0.61
NPM1-204ENST00000517671 Q6ZVU0 165 aa11.25□□□□□ -0.61
NPM1-204ENST00000517671 MEIOBQ8N635 442 aa11.25□□□□□ -0.61
NPM1-204ENST00000517671 SENP2Q9HC62 589 aa11.25□□□□□ -0.61
NPM1-204ENST00000517671 OVOS2A0A0G2JMS6 1433 aa11.24□□□□□ -0.61
NPM1-204ENST00000517671 OVOS2A0A0J9YW53 1432 aa11.24□□□□□ -0.61
NPM1-204ENST00000517671 OVOS2Q6IE36 1432 aa11.24□□□□□ -0.61
NPM1-204ENST00000517671 BMP1P13497 986 aa11.24□□□□□ -0.61
NPM1-204ENST00000517671 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
NPM1-204ENST00000517671 OXLD1Q5BKU9 147 aa11.24□□□□□ -0.61
NPM1-204ENST00000517671 NUTM2GQ5VZR2 741 aa11.24□□□□□ -0.61
NPM1-204ENST00000517671 PLPP7Q8NBV4 271 aa11.24□□□□□ -0.61
NPM1-204ENST00000517671 ADAMTS19Q8TE59 1207 aa11.24□□□□□ -0.61
NPM1-204ENST00000517671 CRB1P82279 1406 aa11.24□□□□□ -0.61
NPM1-204ENST00000517671 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
NPM1-204ENST00000517671 RGPD8O14715 1765 aaPredicted RBP11.23□□□□□ -0.61
NPM1-204ENST00000517671 LILRA1O75019 489 aa11.23□□□□□ -0.61
NPM1-204ENST00000517671 BMP2P12643 396 aa11.23□□□□□ -0.61
NPM1-204ENST00000517671 ADD1P35611 737 aaKnown RBP11.23□□□□□ -0.61
NPM1-204ENST00000517671 ERVK-9P63128 1117 aa11.23□□□□□ -0.61
NPM1-204ENST00000517671 SRPK2P78362 688 aaKnown RBP11.23□□□□□ -0.61
NPM1-204ENST00000517671 TSGA10IPQ3SY00 556 aa11.23□□□□□ -0.61
NPM1-204ENST00000517671 C6orf118Q5T5N4 469 aa11.23□□□□□ -0.61
NPM1-204ENST00000517671 NFATC2IPQ8NCF5 419 aa11.23□□□□□ -0.61
NPM1-204ENST00000517671 KCNH5Q8NCM2 988 aa11.23□□□□□ -0.61
NPM1-204ENST00000517671 BCL9O00512 1426 aa11.23□□□□□ -0.61
NPM1-204ENST00000517671 TERTO14746 1132 aaKnown RBP11.22□□□□□ -0.61
NPM1-204ENST00000517671 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
NPM1-204ENST00000517671 TOM1L2Q6ZVM7 507 aa11.22□□□□□ -0.61
NPM1-204ENST00000517671 LINC00528Q8N1L1 170 aa11.22□□□□□ -0.61
NPM1-204ENST00000517671 TRIM47Q96LD4 638 aa11.22□□□□□ -0.61
NPM1-204ENST00000517671 PURBQ96QR8 312 aaKnown RBP11.22□□□□□ -0.61
NPM1-204ENST00000517671 STK32BQ9NY57 414 aa11.22□□□□□ -0.61
NPM1-204ENST00000517671 PIK3CDO00329 1044 aa11.21□□□□□ -0.61
NPM1-204ENST00000517671 EXOC5O00471 708 aa11.21□□□□□ -0.61
NPM1-204ENST00000517671 ADH1AP07327 375 aa11.21□□□□□ -0.61
NPM1-204ENST00000517671 LCE2CQ5TA81 110 aa11.21□□□□□ -0.61
NPM1-204ENST00000517671 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
NPM1-204ENST00000517671 KIFC2Q96AC6 838 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms