RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 FSD1Q9BTV5 496 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 PAPPAQ13219 1627 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 MEGF6O75095 1541 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 C1orf167Q5SNV9 1468 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 VPS37CA5D8V6 355 aaPredicted RBP7.93□□□□□ -1.14
CDH12-203ENST00000517378 TAF5LO75529 589 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 NEXNQ0ZGT2 675 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 COL9A3Q14050 684 aaPredicted RBP7.93□□□□□ -1.14
CDH12-203ENST00000517378 LARP1BQ659C4 914 aaKnown RBP7.93□□□□□ -1.14
CDH12-203ENST00000517378 ZNF589Q86UQ0 364 aaPredicted RBP7.93□□□□□ -1.14
CDH12-203ENST00000517378 NECAB1Q8N987 351 aa7.93□□□□□ -1.14
CDH12-203ENST00000517378 SCAND2PQ9GZW5 306 aaPredicted RBP7.93□□□□□ -1.14
CDH12-203ENST00000517378 CCDC8Q9H0W5 538 aaPredicted RBP7.93□□□□□ -1.14
CDH12-203ENST00000517378 ZNF609O15014 1411 aa7.92□□□□□ -1.14
CDH12-203ENST00000517378 TRHP20396 242 aaPredicted RBP7.92□□□□□ -1.14
CDH12-203ENST00000517378 HMGN5P82970 282 aaKnown RBP7.92□□□□□ -1.14
CDH12-203ENST00000517378 NOLC1Q14978 699 aaKnown RBP eCLIP7.92□□□□□ -1.14
CDH12-203ENST00000517378 DDX60Q8IY21 1712 aaKnown RBP7.92□□□□□ -1.14
CDH12-203ENST00000517378 PALLDQ8WX93 1383 aa7.92□□□□□ -1.14
CDH12-203ENST00000517378 AP5Z1O43299 807 aa7.92□□□□□ -1.14
CDH12-203ENST00000517378 KCNJ4P48050 445 aa7.92□□□□□ -1.14
CDH12-203ENST00000517378 EPHA10Q5JZY3 1008 aa7.92□□□□□ -1.14
CDH12-203ENST00000517378 RIC3Q7Z5B4 369 aa7.92□□□□□ -1.14
CDH12-203ENST00000517378 FAM200AQ8TCP9 573 aa7.92□□□□□ -1.14
CDH12-203ENST00000517378 ORAI2Q96SN7 254 aa7.92□□□□□ -1.14
CDH12-203ENST00000517378 BOLA2Q9H3K6 86 aa7.92□□□□□ -1.14
CDH12-203ENST00000517378 PHKG2P15735 406 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 MAP3K11Q16584 847 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 TNNI3KQ59H18 835 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 GTF3C6Q969F1 213 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 NUP62CLQ9H1M0 184 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 DDX19AQ9NUU7 478 aaKnown RBP7.91□□□□□ -1.14
CDH12-203ENST00000517378 DBNLQ9UJU6 430 aaKnown RBP7.91□□□□□ -1.14
CDH12-203ENST00000517378 MRVI1Q9Y6F6 885 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 TAF6LQ9Y6J9 622 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 FPGT-TNNI3KV9GXZ4 949 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 SH3TC1Q8TE82 1336 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 ZBTB7CA1YPR0 619 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 PTPN12Q05209 780 aaKnown RBP7.91□□□□□ -1.14
CDH12-203ENST00000517378 KIAA1524Q8TCG1 905 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 XAGE3Q8WTP9 111 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 HAUS7Q99871 368 aa7.91□□□□□ -1.14
CDH12-203ENST00000517378 TTC12Q9H892 705 aaPredicted RBP7.91□□□□□ -1.14
CDH12-203ENST00000517378 U3KPZ7 1027 aaPredicted RBP7.91□□□□□ -1.14
CDH12-203ENST00000517378 CASP7P55210 303 aa7.9□□□□□ -1.14
CDH12-203ENST00000517378 TYRO3Q06418 890 aa7.9□□□□□ -1.14
CDH12-203ENST00000517378 AIMP1Q12904 312 aaKnown RBP7.9□□□□□ -1.14
CDH12-203ENST00000517378 KCNF1Q9H3M0 494 aa7.9□□□□□ -1.14
CDH12-203ENST00000517378 CLSTN2Q9H4D0 955 aa7.9□□□□□ -1.14
CDH12-203ENST00000517378 DCCP43146 1447 aa7.9□□□□□ -1.14
CDH12-203ENST00000517378 LIG1P18858 919 aa7.9□□□□□ -1.15
CDH12-203ENST00000517378 RESTQ13127 1097 aa7.9□□□□□ -1.15
CDH12-203ENST00000517378 COPS6Q7L5N1 327 aa7.9□□□□□ -1.15
CDH12-203ENST00000517378 LEO1Q8WVC0 666 aaPredicted RBP7.9□□□□□ -1.15
CDH12-203ENST00000517378 RBM33Q96EV2 1170 aaKnown RBP7.9□□□□□ -1.15
CDH12-203ENST00000517378 MYD88Q99836 296 aa7.9□□□□□ -1.15
CDH12-203ENST00000517378 LLPHQ9BRT6 129 aaKnown RBP7.9□□□□□ -1.15
CDH12-203ENST00000517378 SIL1Q9H173 461 aa7.9□□□□□ -1.15
CDH12-203ENST00000517378 GOLGA6L6A8MZA4 724 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 SNRPA1P09661 255 aaKnown RBP7.89□□□□□ -1.15
CDH12-203ENST00000517378 ANKRD13DQ6ZTN6 518 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 KRT28Q7Z3Y7 464 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 SMARCC2Q8TAQ2 1214 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 KLHDC4Q8TBB5 520 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 SPATA32Q96LK8 384 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 ZNF830Q96NB3 372 aaPredicted RBP7.89□□□□□ -1.15
CDH12-203ENST00000517378 AGXT2Q9BYV1 514 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 CAVIN2O95810 425 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 RBM10P98175 930 aaKnown RBP7.89□□□□□ -1.15
CDH12-203ENST00000517378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.89□□□□□ -1.15
CDH12-203ENST00000517378 TDRD7Q8NHU6 1098 aaKnown RBP7.89□□□□□ -1.15
CDH12-203ENST00000517378 DDX54Q8TDD1 881 aaKnown RBP7.89□□□□□ -1.15
CDH12-203ENST00000517378 RAPGEF4Q8WZA2 1011 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 ZNF496Q96IT1 587 aaPredicted RBP7.89□□□□□ -1.15
CDH12-203ENST00000517378 NEK1Q96PY6 1258 aa7.89□□□□□ -1.15
CDH12-203ENST00000517378 ZSCAN16Q9H4T2 348 aaPredicted RBP7.89□□□□□ -1.15
CDH12-203ENST00000517378 HMGB1P09429 215 aaKnown RBP7.88□□□□□ -1.15
CDH12-203ENST00000517378 TATP17735 454 aaPredicted RBP7.88□□□□□ -1.15
CDH12-203ENST00000517378 TFCP2Q12800 502 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 SLC39A6Q13433 755 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 MCMDC2Q4G0Z9 681 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 DCAF5Q96JK2 942 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 TNMDQ9H2S6 317 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 GPR108Q9NPR9 543 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 DACT1Q9NYF0 836 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 FAM13BQ9NYF5 915 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 MYL6BP14649 208 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 FERMT3Q86UX7 667 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 PLA2G4DQ86XP0 818 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 IFNL2Q8IZJ0 200 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 KBTBD3Q8NAB2 608 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 EDC3Q96F86 508 aaKnown RBP7.88□□□□□ -1.15
CDH12-203ENST00000517378 PGBD1Q96JS3 809 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 TCEANC2Q96MN5 208 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 SALL1Q9NSC2 1324 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 PFKFB2O60825 505 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 CYP21A2P08686 494 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 CDC25BP30305 580 aa7.88□□□□□ -1.15
CDH12-203ENST00000517378 NAA16Q6N069 864 aaPredicted RBP7.88□□□□□ -1.15
CDH12-203ENST00000517378 FAM173BQ6P4H8 233 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms