RNA–Protein interactions for RNA: ENST00000516316.1

RNU6-1299P-201, Transcript of RNA, U6 small nuclear 1299, pseudogene, humanhuman

BASIC

Gene RNU6-1299P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1299P-201ENST00000516316 QTRT2Q9H974 415 aaKnown RBP3.67□□□□□ -1.82
RNU6-1299P-201ENST00000516316 FAM196BA6NMK8 535 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L15C9J2P7 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L10C9JJH3 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L13C9JLJ4 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L12C9JPN9 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L11C9JVI0 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L21D6R901 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L18D6R9N7 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L22D6RA61 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L17D6RBQ6 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L19D6RCP7 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L20D6RJB6 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 DEAF1O75398 565 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 SASH3O75995 380 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 MICAL2O94851 1124 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 CPB1P15086 417 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 NOS3P29474 1203 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 GPLD1P80108 840 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 USP17L24Q0WX57 530 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 LRP8Q14114 963 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 PCSK7Q16549 785 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 DHX32Q7L7V1 743 aaKnown RBP3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 PROSER2Q86WR7 435 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 WFDC12Q8WWY7 111 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 TP53INP1Q96A56 240 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 MYO19Q96H55 970 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
RNU6-1299P-201ENST00000516316 FOXO3O43524 673 aa3.65□□□□□ -1.83
RNU6-1299P-201ENST00000516316 EGFRP00533 1210 aa3.65□□□□□ -1.83
RNU6-1299P-201ENST00000516316 EPB42P16452 691 aa3.65□□□□□ -1.83
RNU6-1299P-201ENST00000516316 ARSDP51689 593 aa3.65□□□□□ -1.83
RNU6-1299P-201ENST00000516316 DGKZQ13574 1117 aa3.65□□□□□ -1.83
RNU6-1299P-201ENST00000516316 C11orf91Q3C1V1 193 aa3.65□□□□□ -1.83
RNU6-1299P-201ENST00000516316 VRTNQ9H8Y1 702 aa3.65□□□□□ -1.83
RNU6-1299P-201ENST00000516316 USP21Q9UK80 565 aa3.65□□□□□ -1.83
RNU6-1299P-201ENST00000516316 LRFN2Q9ULH4 789 aa3.65□□□□□ -1.83
RNU6-1299P-201ENST00000516316 A6NJR5 290 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 DLL1O00548 723 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 RARAP10276 462 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 IREB2P48200 963 aaKnown RBP3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 NRLP54845 237 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 MLLT1Q03111 559 aaPredicted RBP3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 ELMSAN1Q6PJG2 1045 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 IGF2-ASQ6U949 168 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 KRT25Q7Z3Z0 450 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 WFDC8Q8IUA0 241 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 MEGF10Q96KG7 1140 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 CALR3Q96L12 384 aaKnown RBP3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 TLR7Q9NYK1 1049 aaKnown RBP3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 USP20Q9Y2K6 914 aa3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 RTCBQ9Y3I0 505 aaKnown RBP3.64□□□□□ -1.83
RNU6-1299P-201ENST00000516316 HOXD8P13378 290 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 LMOD1P29536 600 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 CFAP70Q5T0N1 1121 aa3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 HFE2Q6ZVN8 426 aa3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 KRTAP1-3Q8IUG1 177 aa3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 DZIP1LQ8IYY4 767 aaKnown RBP3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 TMEM130Q8N3G9 435 aa3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 SMG9Q9H0W8 520 aaKnown RBP3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 RNF112Q9ULX5 631 aa3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 KCNMB2Q9Y691 235 aa3.63□□□□□ -1.83
RNU6-1299P-201ENST00000516316 LOC102724428A0A0B4J2F2 783 aa3.62□□□□□ -1.83
RNU6-1299P-201ENST00000516316 J3QW42 95 aa3.62□□□□□ -1.83
RNU6-1299P-201ENST00000516316 MMP20O60882 483 aa3.62□□□□□ -1.83
RNU6-1299P-201ENST00000516316 SIK1P57059 783 aa3.62□□□□□ -1.83
RNU6-1299P-201ENST00000516316 COX20Q5RI15 118 aa3.62□□□□□ -1.83
RNU6-1299P-201ENST00000516316 PRR23CQ6ZRP0 262 aa3.62□□□□□ -1.83
RNU6-1299P-201ENST00000516316 NBPF11Q86T75 865 aa3.62□□□□□ -1.83
RNU6-1299P-201ENST00000516316 F8W735 103 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 TM4SF5O14894 197 aa3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 XYLBO75191 536 aa3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 ALX3O95076 343 aa3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 EIF2AK2P19525 551 aaKnown RBP3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 FKBP5Q13451 457 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 FAM26DQ5JW98 314 aa3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 Q6ZS46 218 aa3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 TREML1Q86YW5 311 aa3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 PLD4Q96BZ4 506 aa3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 AKTIPQ9H8T0 292 aa3.61□□□□□ -1.83
RNU6-1299P-201ENST00000516316 ARID4AP29374 1257 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 SOX18P35713 384 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 FAM69CQ0P6D2 419 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 SETDB1Q15047 1291 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 TRIP4Q15650 581 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 OCLNQ16625 522 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 SLC51AQ86UW1 340 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 ETFBKMTQ8IXQ9 262 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 RGL4Q8IZJ4 473 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 CMTR1Q8N1G2 835 aaKnown RBP3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 IL22RA1Q8N6P7 574 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 FAM200AQ8TCP9 573 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 VTI1AQ96AJ9 217 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 SAP130Q9H0E3 1048 aa3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 MRPL18Q9H0U6 180 aaKnown RBP3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.6□□□□□ -1.83
RNU6-1299P-201ENST00000516316 PSAPP07602 524 aa3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 FSTP19883 344 aa3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 TMEM132AQ24JP5 1023 aa3.59□□□□□ -1.83
RNU6-1299P-201ENST00000516316 CDCA8Q53HL2 280 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms