RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 TTLL11Q8NHH1 800 aa12.26□□□□□ -0.45
SCARNA16-201ENST00000515981 RBM17Q96I25 401 aaKnown RBP12.26□□□□□ -0.45
SCARNA16-201ENST00000515981 MEIS3Q99687 375 aa12.26□□□□□ -0.45
SCARNA16-201ENST00000515981 PDZRN3Q9UPQ7 1066 aa12.26□□□□□ -0.45
SCARNA16-201ENST00000515981 SLX4Q8IY92 1834 aa12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 C21orf2O43822 256 aa12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 CTSWP56202 376 aa12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 PRPF40BQ6NWY9 871 aaKnown RBP12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 CELF1Q92879 486 aaKnown RBP12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 CNKSR1Q969H4 720 aa12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 PLA2G12BQ9BX93 195 aa12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 GREM2Q9H772 168 aa12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 RIC1Q4ADV7 1423 aa12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 LAMB2P55268 1798 aa12.25□□□□□ -0.45
SCARNA16-201ENST00000515981 UTYO14607 1347 aa12.24□□□□□ -0.45
SCARNA16-201ENST00000515981 CSF1RP07333 972 aa12.24□□□□□ -0.45
SCARNA16-201ENST00000515981 LMBR1LQ6UX01 489 aa12.24□□□□□ -0.45
SCARNA16-201ENST00000515981 ITPRIPQ8IWB1 547 aa12.24□□□□□ -0.45
SCARNA16-201ENST00000515981 CRAMP1Q96RY5 1269 aa12.24□□□□□ -0.45
SCARNA16-201ENST00000515981 BICC1Q9H694 974 aaKnown RBP12.24□□□□□ -0.45
SCARNA16-201ENST00000515981 CHMP3Q9Y3E7 222 aa12.24□□□□□ -0.45
SCARNA16-201ENST00000515981 COL4A1P02462 1669 aa12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 UBTFL1P0CB47 393 aaPredicted RBP12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 HSP90B1P14625 803 aaKnown RBP12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 ALDH1B1P30837 517 aa12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 FAM161AQ3B820 660 aa12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 CCDC152Q4G0S7 254 aa12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 ARHGAP27Q6ZUM4 889 aa12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 ANKRD44Q8N8A2 993 aa12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 C7orf43Q8WVR3 580 aa12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 COG6Q9Y2V7 657 aa12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 UTRNP46939 3433 aa12.23□□□□□ -0.45
SCARNA16-201ENST00000515981 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
SCARNA16-201ENST00000515981 GRAPQ13588 217 aa12.22□□□□□ -0.45
SCARNA16-201ENST00000515981 GRAPLQ8TC17 118 aaPredicted RBP12.22□□□□□ -0.45
SCARNA16-201ENST00000515981 C1orf115Q9H7X2 142 aa12.22□□□□□ -0.45
SCARNA16-201ENST00000515981 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
SCARNA16-201ENST00000515981 LRRFIP2Q9Y608 721 aaKnown RBP12.22□□□□□ -0.45
SCARNA16-201ENST00000515981 BRCA1P38398 1863 aaKnown RBP12.22□□□□□ -0.45
SCARNA16-201ENST00000515981 CACNA1SQ13698 1873 aa12.22□□□□□ -0.45
SCARNA16-201ENST00000515981 DLEC1Q9Y238 1755 aa12.21□□□□□ -0.45
SCARNA16-201ENST00000515981 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
SCARNA16-201ENST00000515981 ZBTB7BO15156 539 aaPredicted RBP12.21□□□□□ -0.45
SCARNA16-201ENST00000515981 BBOX1O75936 387 aa12.21□□□□□ -0.45
SCARNA16-201ENST00000515981 ITGA6P23229 1130 aa12.21□□□□□ -0.45
SCARNA16-201ENST00000515981 RPS8P62241 208 aaKnown RBP12.21□□□□□ -0.45
SCARNA16-201ENST00000515981 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
SCARNA16-201ENST00000515981 ZNF594Q96JF6 807 aaPredicted RBP12.21□□□□□ -0.45
SCARNA16-201ENST00000515981 DCAF8L1A6NGE4 600 aa12.2□□□□□ -0.46
SCARNA16-201ENST00000515981 MS4A1P11836 297 aa12.2□□□□□ -0.46
SCARNA16-201ENST00000515981 ANKRD18BA2A2Z9 1011 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 GRIN3BO60391 1043 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 GNAI3P08754 354 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 PRELPP51888 382 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 RASSF7Q02833 373 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 IFIT5Q13325 482 aaKnown RBP12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 PDE3AQ14432 1141 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 RABL6Q3YEC7 729 aaPredicted RBP12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 ANKRD18AQ8IVF6 992 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 KLHDC4Q8TBB5 520 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 ATP6V0A2Q9Y487 856 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 MYH3P11055 1940 aa12.19□□□□□ -0.46
SCARNA16-201ENST00000515981 WTIPA6NIX2 430 aaPredicted RBP12.18□□□□□ -0.46
SCARNA16-201ENST00000515981 NFKBIEO00221 500 aa12.18□□□□□ -0.46
SCARNA16-201ENST00000515981 GNAI2P04899 355 aa12.18□□□□□ -0.46
SCARNA16-201ENST00000515981 CCDC57Q2TAC2 916 aa12.18□□□□□ -0.46
SCARNA16-201ENST00000515981 SP8Q8IXZ3 490 aa12.18□□□□□ -0.46
SCARNA16-201ENST00000515981 PUS3Q9BZE2 481 aaKnown RBP12.18□□□□□ -0.46
SCARNA16-201ENST00000515981 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
SCARNA16-201ENST00000515981 GPSM2P81274 684 aa12.17□□□□□ -0.46
SCARNA16-201ENST00000515981 CCDC93Q567U6 631 aa12.17□□□□□ -0.46
SCARNA16-201ENST00000515981 GPR101Q96P66 508 aaPredicted RBP12.17□□□□□ -0.46
SCARNA16-201ENST00000515981 CRBNQ96SW2 442 aa12.17□□□□□ -0.46
SCARNA16-201ENST00000515981 CDC5LQ99459 802 aaKnown RBP12.17□□□□□ -0.46
SCARNA16-201ENST00000515981 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 IGHMBP2P38935 993 aaKnown RBP12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 IRX6P78412 446 aaPredicted RBP12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 TAF7LQ5H9L4 462 aa12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 HELBQ8NG08 1087 aaPredicted RBP12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 ZNF277Q9NRM2 450 aaPredicted RBP12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 BSDC1Q9NW68 430 aaPredicted RBP12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 DDX19BQ9UMR2 479 aa12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 PA2G4Q9UQ80 394 aaKnown RBP12.16□□□□□ -0.46
SCARNA16-201ENST00000515981 PNMA6EA0A0J9YXQ4 647 aa12.15□□□□□ -0.46
SCARNA16-201ENST00000515981 LRRC24Q50LG9 513 aa12.15□□□□□ -0.46
SCARNA16-201ENST00000515981 RTKN2Q8IZC4 609 aa12.15□□□□□ -0.46
SCARNA16-201ENST00000515981 MPNDQ8N594 471 aa12.15□□□□□ -0.46
SCARNA16-201ENST00000515981 MPHOSPH8Q99549 860 aa12.15□□□□□ -0.46
SCARNA16-201ENST00000515981 TMX4Q9H1E5 349 aaPredicted RBP12.15□□□□□ -0.46
SCARNA16-201ENST00000515981 ZBTB40Q9NUA8 1239 aa12.15□□□□□ -0.46
SCARNA16-201ENST00000515981 NSFL1CQ9UNZ2 370 aaKnown RBP12.15□□□□□ -0.46
SCARNA16-201ENST00000515981 HDAC5Q9UQL6 1122 aa12.15□□□□□ -0.46
SCARNA16-201ENST00000515981 SNAP23O00161 211 aa12.14□□□□□ -0.47
SCARNA16-201ENST00000515981 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
SCARNA16-201ENST00000515981 TAF5LO75529 589 aa12.14□□□□□ -0.47
SCARNA16-201ENST00000515981 ATP8B2P98198 1209 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 283.3 ms