RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	STK3	Q13188	491 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	IQCB1	Q15051	598 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	BRMS1	Q9HCU9	246 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	HYPK	Q9NX55	129 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	VPS18	Q9P253	973 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	USP32	Q8NFA0	1604 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	HAP1	P54257	671 aa	Predicted RBP	12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	KIDINS220	Q9ULH0	1771 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	YEATS2	Q9ULM3	1422 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	SMC2	O95347	1197 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	ME3	Q16798	604 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	ADCK5	Q3MIX3	580 aa		12.99	□□□□□ -0.33
PDCD6-210	ENST00000513582	POGZ	Q7Z3K3	1410 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	ACE	P12821	1306 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	IFT172	Q9UG01	1749 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	EIF3CL	B5ME19	914 aa	Known RBP	12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	GNAI2	P04899	355 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	GNAI3	P08754	354 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	TSGA10IP	Q3SY00	556 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	TMC6	Q7Z403	805 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	LEO1	Q8WVC0	666 aa	Predicted RBP	12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	EIF3C	Q99613	913 aa	Known RBP	12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	SRGAP3	O43295	1099 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	AOPEP	Q8N6M6	819 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	PLEKHG2	Q9H7P9	1386 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582	NPHP3	Q7Z494	1330 aa		12.98	□□□□□ -0.33
PDCD6-210	ENST00000513582		H3BQF6	201 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	ATP2B1	P20020	1258 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	EIF4A2	Q14240	407 aa	Known RBP	12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	PGBD1	Q96JS3	809 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	FMNL2	Q96PY5	1086 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	ADGRB1	O14514	1584 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	PNMA6E	A0A0J9YXQ4	647 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	ZNF853	P0CG23	659 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	MAGEA9	P43362	315 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	ARFGAP3	Q9NP61	516 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	MLH3	Q9UHC1	1453 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	PIP4K2A	P48426	406 aa	Predicted RBP	12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	ST3GAL1	Q11201	340 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	MCM6	Q14566	821 aa		12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	PRPF40B	Q6NWY9	871 aa	Known RBP	12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	COL3A1	P02461	1466 aa	Predicted RBP	12.97	□□□□□ -0.33
PDCD6-210	ENST00000513582	TADA3	O75528	432 aa		12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	HSP90B1	P14625	803 aa	Known RBP	12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	SFPQ	P23246	707 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	PSME1	Q06323	249 aa		12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	ESCO1	Q5FWF5	840 aa		12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	TTLL5	Q6EMB2	1281 aa		12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	SARM1	Q6SZW1	724 aa		12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	EXOC4	Q96A65	974 aa		12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	DDX11	Q96FC9	970 aa		12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	ZSWIM4	Q9H7M6	989 aa		12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	ZC3H13	Q5T200	1668 aa	Known RBP	12.96	□□□□□ -0.33
PDCD6-210	ENST00000513582	SSH2	Q76I76	1423 aa		12.96	□□□□□ -0.34
PDCD6-210	ENST00000513582	KIF24	Q5T7B8	1368 aa		12.96	□□□□□ -0.34
PDCD6-210	ENST00000513582	AATK	Q6ZMQ8	1374 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	ETF1	P62495	437 aa	Known RBP	12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	LARP1	Q6PKG0	1096 aa	Known RBP	12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	UBXN6	Q9BZV1	441 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	LRRC7	Q96NW7	1537 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	SGSM2	O43147	1006 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	CCDC172	P0C7W6	258 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	GSDMD	P57764	484 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	STX1A	Q16623	288 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	ARMCX5	Q6P1M9	558 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	CEP83	Q9Y592	693 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	GLI2	P10070	1586 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	SALL3	Q9BXA9	1300 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	PPL	O60437	1756 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	PHACTR2	O75167	634 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	CCDC158	Q5M9N0	1113 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	RBM43	Q6ZSC3	357 aa	Known RBP	12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	CNPY4	Q8N129	248 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	FAM212A	Q96EL1	285 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	LSG1	Q9H089	658 aa	Known RBP	12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	AMOTL2	Q9Y2J4	779 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	CYP46A1	Q9Y6A2	500 aa		12.95	□□□□□ -0.34
PDCD6-210	ENST00000513582	TTC21A	Q8NDW8	1320 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	ABCC3	O15438	1527 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	IVL	P07476	585 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	DHX40	Q8IX18	779 aa	Known RBP	12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	PDE11A	Q9HCR9	933 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	TPCN1	Q9ULQ1	816 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	MYL6B	P14649	208 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	ZC3H6	P61129	1189 aa	Known RBP	12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	MPRIP	Q6WCQ1	1025 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	NBPF11	Q86T75	865 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	PARD6B	Q9BYG5	372 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	TTC21B	Q7Z4L5	1316 aa		12.94	□□□□□ -0.34
PDCD6-210	ENST00000513582	EFCAB8	A8MWE9	144 aa		12.93	□□□□□ -0.34
PDCD6-210	ENST00000513582	MTHFSD	Q2M296	383 aa	Known RBP	12.93	□□□□□ -0.34
PDCD6-210	ENST00000513582	CXorf56	Q9H5V9	222 aa		12.93	□□□□□ -0.34
PDCD6-210	ENST00000513582	IFNK	Q9P0W0	207 aa		12.93	□□□□□ -0.34
PDCD6-210	ENST00000513582	TULP4	Q9NRJ4	1543 aa		12.93	□□□□□ -0.34
PDCD6-210	ENST00000513582	FANCG	O15287	622 aa		12.93	□□□□□ -0.34
PDCD6-210	ENST00000513582	NRDC	O43847	1150 aa		12.93	□□□□□ -0.34
PDCD6-210	ENST00000513582	COL9A3	Q14050	684 aa	Predicted RBP	12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms