RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 EGFL6Q8IUX8 553 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 CELF2-AS1Q8N7Q2 184 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 CFHR5Q9BXR6 569 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 AKAP2Q9Y2D5 859 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 CD2APQ9Y5K6 639 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 V9GY48 417 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 SFI1A8K8P3 1242 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 CCDC92Q53HC0 331 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 ANO1Q5XXA6 986 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 HDGFL2Q7Z4V5 671 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 NFATC2IPQ8NCF5 419 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 SMAD5Q99717 465 aaKnown RBP7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 NGRNQ9NPE2 291 aaKnown RBP7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 PCDH10Q9P2E7 1040 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 CEP126Q9P2H0 1117 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 IP6K2Q9UHH9 426 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 WASHC2CQ9Y4E1 1318 aa7.73□□□□□ -1.17
TRAPPC11-209ENST00000512476 KCNQ2O43526 872 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 EPHB1P54762 984 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 MEI1Q5TIA1 1274 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 PRPF38BQ5VTL8 546 aaKnown RBP7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 DGKHQ86XP1 1220 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 RELL1Q8IUW5 271 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 TPCN2Q8NHX9 752 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 HELQQ8TDG4 1101 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 GPRASP2Q96D09 838 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 RTFDC1Q9BY42 306 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 KMT5AQ9NQR1 393 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 SYNJ1O43426 1573 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 CBFA2T2O43439 604 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 VARSP26640 1264 aaKnown RBP7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 ANKRD42Q8N9B4 389 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 MKL1Q969V6 931 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 TRIM55Q9BYV6 548 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 CXorf56Q9H5V9 222 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 CD248Q9HCU0 757 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 IPPQ9Y573 584 aa7.72□□□□□ -1.17
TRAPPC11-209ENST00000512476 ATP5J2-PTCD1G3V325 749 aa7.71□□□□□ -1.18
TRAPPC11-209ENST00000512476 PGRP06401 933 aa7.71□□□□□ -1.18
TRAPPC11-209ENST00000512476 F6X3S4 739 aa7.71□□□□□ -1.18
TRAPPC11-209ENST00000512476 ADD2P35612 726 aa7.71□□□□□ -1.18
TRAPPC11-209ENST00000512476 CRELD1Q96HD1 420 aa7.71□□□□□ -1.18
TRAPPC11-209ENST00000512476 FEZ1Q99689 392 aa7.71□□□□□ -1.18
TRAPPC11-209ENST00000512476 ASPSCR1Q9BZE9 553 aa7.71□□□□□ -1.18
TRAPPC11-209ENST00000512476 TMEM260Q9NX78 707 aa7.71□□□□□ -1.18
TRAPPC11-209ENST00000512476 RABGAP1Q9Y3P9 1069 aa7.71□□□□□ -1.18
TRAPPC11-209ENST00000512476 ZBTB7BO15156 539 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 ZBTB24O43167 697 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 SSBP05455 408 aaKnown RBP eCLIP7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 NBPF6Q5VWK0 638 aa7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 CHCHD4Q8N4Q1 142 aa7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 NBPF4Q96M43 638 aa7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 GPR101Q96P66 508 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 PRKD2Q9BZL6 878 aa7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 AGR2O95994 175 aa7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 ARSHQ5FYA8 562 aa7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 KRT77Q7Z794 578 aa7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 CLASRPQ8N2M8 674 aaKnown RBP7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 TMEM87BQ96K49 555 aa7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 SAGE1Q9NXZ1 904 aa7.7□□□□□ -1.18
TRAPPC11-209ENST00000512476 RHOBTB3O94955 611 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 F2P00734 622 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 NAT2P11245 290 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 COL9A1P20849 921 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 PLCB3Q01970 1234 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 SETDB1Q15047 1291 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 LARP1BQ659C4 914 aaKnown RBP7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 LVRNQ6Q4G3 990 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 PLPP7Q8NBV4 271 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 CCDC8Q9H0W5 538 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 NOD1Q9Y239 953 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 LAMC3Q9Y6N6 1575 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 NESP48681 1621 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 MTA2O94776 668 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 CNGB1Q14028 1251 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 CCDC70Q6NSX1 233 aa7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 EIF2AK1Q9BQI3 630 aaKnown RBP7.69□□□□□ -1.18
TRAPPC11-209ENST00000512476 TOP2BQ02880 1626 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 PNMA6FA0A0J9YX94 578 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 PRRT4C9JH25 899 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 WASLO00401 505 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 TCEA3O75764 348 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 GJA5P36382 358 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 NASPP49321 788 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 SPECC1Q5M775 1068 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 SERINC2Q96SA4 455 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 SIRPGQ9P1W8 387 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 BIVM-ERCC5R4GMW8 1640 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 APPP05067 770 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 TNFAIP3P21580 790 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 CLK1P49759 484 aaKnown RBP7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 C16orf86Q6ZW13 317 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 HS2ST1Q7LGA3 356 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 THNSL2Q86YJ6 484 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 HOMER1Q86YM7 354 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 SKA1Q96BD8 255 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 PCDHGB3Q9Y5G1 929 aa7.68□□□□□ -1.18
TRAPPC11-209ENST00000512476 FDX1P10109 184 aa7.67□□□□□ -1.18
TRAPPC11-209ENST00000512476 GNA15P30679 374 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms