RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 ZNF277Q9NRM2 450 aaPredicted RBP20.23■□□□□ 0.83
DDX41-214ENST00000512334 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
DDX41-214ENST00000512334 TAF1P21675 1872 aa20.22■□□□□ 0.83
DDX41-214ENST00000512334 TIAM2Q8IVF5 1701 aa20.22■□□□□ 0.83
DDX41-214ENST00000512334 CCDC85AQ96PX6 553 aaPredicted RBP20.22■□□□□ 0.83
DDX41-214ENST00000512334 SMC4Q9NTJ3 1288 aa20.22■□□□□ 0.83
DDX41-214ENST00000512334 ATP6V0A2Q9Y487 856 aa20.22■□□□□ 0.83
DDX41-214ENST00000512334 ZC3H4Q9UPT8 1303 aaKnown RBP20.22■□□□□ 0.83
DDX41-214ENST00000512334 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
DDX41-214ENST00000512334 CCDC152Q4G0S7 254 aa20.21■□□□□ 0.83
DDX41-214ENST00000512334 GRIPAP1Q4V328 841 aa20.21■□□□□ 0.83
DDX41-214ENST00000512334 DICER1Q9UPY3 1922 aaKnown RBP20.2■□□□□ 0.82
DDX41-214ENST00000512334 H7C1W4 665 aa20.2■□□□□ 0.82
DDX41-214ENST00000512334 ALDH1L2Q3SY69 923 aa20.2■□□□□ 0.82
DDX41-214ENST00000512334 BEND3Q5T5X7 828 aa20.2■□□□□ 0.82
DDX41-214ENST00000512334 CELF1Q92879 486 aaKnown RBP20.2■□□□□ 0.82
DDX41-214ENST00000512334 CTSWP56202 376 aa20.19■□□□□ 0.82
DDX41-214ENST00000512334 SP8Q8IXZ3 490 aa20.19■□□□□ 0.82
DDX41-214ENST00000512334 PSMD1Q99460 953 aa20.19■□□□□ 0.82
DDX41-214ENST00000512334 PTPRCP08575 1304 aa20.19■□□□□ 0.82
DDX41-214ENST00000512334 KDM2BQ8NHM5 1336 aa20.19■□□□□ 0.82
DDX41-214ENST00000512334 IARSP41252 1262 aaKnown RBP20.18■□□□□ 0.82
DDX41-214ENST00000512334 TMC4Q7Z404 712 aa20.18■□□□□ 0.82
DDX41-214ENST00000512334 SEC31BQ9NQW1 1179 aa20.18■□□□□ 0.82
DDX41-214ENST00000512334 SNED1Q8TER0 1413 aa20.18■□□□□ 0.82
DDX41-214ENST00000512334 RPS8P62241 208 aaKnown RBP20.17■□□□□ 0.82
DDX41-214ENST00000512334 DPP8Q6V1X1 898 aaPredicted RBP20.17■□□□□ 0.82
DDX41-214ENST00000512334 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
DDX41-214ENST00000512334 MYH3P11055 1940 aa20.17■□□□□ 0.82
DDX41-214ENST00000512334 GLTPD2A6NH11 291 aa20.16■□□□□ 0.82
DDX41-214ENST00000512334 ALDH1L1O75891 902 aa20.16■□□□□ 0.82
DDX41-214ENST00000512334 DPY19L2Q6NUT2 758 aa20.16■□□□□ 0.82
DDX41-214ENST00000512334 MPNDQ8N594 471 aa20.16■□□□□ 0.82
DDX41-214ENST00000512334 NMRK2Q9NPI5 230 aa20.16■□□□□ 0.82
DDX41-214ENST00000512334 CASP7P55210 303 aa20.15■□□□□ 0.82
DDX41-214ENST00000512334 TTLL11Q8NHH1 800 aa20.15■□□□□ 0.82
DDX41-214ENST00000512334 C9orf78Q9NZ63 289 aaPredicted RBP20.15■□□□□ 0.82
DDX41-214ENST00000512334 COL4A1P02462 1669 aa20.15■□□□□ 0.82
DDX41-214ENST00000512334 ZBED9Q6R2W3 1325 aa20.14■□□□□ 0.81
DDX41-214ENST00000512334 GRM8O00222 908 aa20.14■□□□□ 0.81
DDX41-214ENST00000512334 ANKRD18AQ8IVF6 992 aa20.14■□□□□ 0.81
DDX41-214ENST00000512334 LARGE2Q8N3Y3 721 aa20.14■□□□□ 0.81
DDX41-214ENST00000512334 SUPT20HQ8NEM7 779 aa20.14■□□□□ 0.81
DDX41-214ENST00000512334 JDP2Q8WYK2 163 aa20.14■□□□□ 0.81
DDX41-214ENST00000512334 GREM2Q9H772 168 aa20.14■□□□□ 0.81
DDX41-214ENST00000512334 PPIP5K2O43314 1243 aa20.13■□□□□ 0.81
DDX41-214ENST00000512334 RARSP54136 660 aaKnown RBP20.13■□□□□ 0.81
DDX41-214ENST00000512334 CDC5LQ99459 802 aaKnown RBP20.13■□□□□ 0.81
DDX41-214ENST00000512334 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
DDX41-214ENST00000512334 RRAGCQ9HB90 399 aa20.13■□□□□ 0.81
DDX41-214ENST00000512334 NSFL1CQ9UNZ2 370 aaKnown RBP20.13■□□□□ 0.81
DDX41-214ENST00000512334 KIF3CO14782 793 aa20.12■□□□□ 0.81
DDX41-214ENST00000512334 AOC3Q16853 763 aa20.12■□□□□ 0.81
DDX41-214ENST00000512334 NOB1Q9ULX3 412 aaKnown RBP20.12■□□□□ 0.81
DDX41-214ENST00000512334 LRRC37AA6NMS7 1700 aa20.12■□□□□ 0.81
DDX41-214ENST00000512334 RTFDC1Q9BY42 306 aaPredicted RBP20.11■□□□□ 0.81
DDX41-214ENST00000512334 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
DDX41-214ENST00000512334 DDNO94850 711 aaPredicted RBP20.1■□□□□ 0.81
DDX41-214ENST00000512334 C1QTNF8P60827 252 aa20.1■□□□□ 0.81
DDX41-214ENST00000512334 GPSM2P81274 684 aa20.1■□□□□ 0.81
DDX41-214ENST00000512334 FAM161AQ3B820 660 aa20.1■□□□□ 0.81
DDX41-214ENST00000512334 NIM1KQ8IY84 436 aa20.1■□□□□ 0.81
DDX41-214ENST00000512334 C16orf71Q8IYS4 520 aaPredicted RBP20.1■□□□□ 0.81
DDX41-214ENST00000512334 RTL9Q8NET4 1388 aa20.09■□□□□ 0.81
DDX41-214ENST00000512334 ZNF541Q9H0D2 1346 aa20.09■□□□□ 0.81
DDX41-214ENST00000512334 C6orf229H3BNL8 230 aa20.09■□□□□ 0.81
DDX41-214ENST00000512334 ITGA6P23229 1130 aa20.09■□□□□ 0.81
DDX41-214ENST00000512334 API5Q9BZZ5 524 aaKnown RBP20.09■□□□□ 0.81
DDX41-214ENST00000512334 ANKIB1Q9P2G1 1089 aa20.09■□□□□ 0.81
DDX41-214ENST00000512334 SPEF2Q9C093 1822 aa20.09■□□□□ 0.81
DDX41-214ENST00000512334 KIF16BQ96L93 1317 aa20.08■□□□□ 0.81
DDX41-214ENST00000512334 COL4A5P29400 1685 aa20.08■□□□□ 0.81
DDX41-214ENST00000512334 FZD9O00144 591 aa20.08■□□□□ 0.81
DDX41-214ENST00000512334 CSF1RP07333 972 aa20.08■□□□□ 0.81
DDX41-214ENST00000512334 IGHMBP2P38935 993 aaKnown RBP20.08■□□□□ 0.81
DDX41-214ENST00000512334 BRPF1P55201 1214 aaPredicted RBP20.08■□□□□ 0.81
DDX41-214ENST00000512334 EIF6P56537 245 aaKnown RBP20.08■□□□□ 0.81
DDX41-214ENST00000512334 FOXO4P98177 505 aa20.08■□□□□ 0.81
DDX41-214ENST00000512334 VPS33BQ9H267 617 aa20.08■□□□□ 0.81
DDX41-214ENST00000512334 VEGFAP15692 232 aaPredicted RBP20.07■□□□□ 0.8
DDX41-214ENST00000512334 KIAA2012Q0VF49 1180 aa20.07■□□□□ 0.8
DDX41-214ENST00000512334 LMBR1LQ6UX01 489 aa20.07■□□□□ 0.8
DDX41-214ENST00000512334 DUOX1Q9NRD9 1551 aa20.07■□□□□ 0.8
DDX41-214ENST00000512334 ANKRD18BA2A2Z9 1011 aa20.06■□□□□ 0.8
DDX41-214ENST00000512334 NBPF7P0C2Y1 421 aaPredicted RBP20.06■□□□□ 0.8
DDX41-214ENST00000512334 IFIT5Q13325 482 aaKnown RBP20.06■□□□□ 0.8
DDX41-214ENST00000512334 WASHC4Q2M389 1173 aa20.06■□□□□ 0.8
DDX41-214ENST00000512334 FRAT1Q92837 279 aaPredicted RBP20.06■□□□□ 0.8
DDX41-214ENST00000512334 SUCLG2Q96I99 432 aa20.06■□□□□ 0.8
DDX41-214ENST00000512334 WDR90Q96KV7 1748 aa20.06■□□□□ 0.8
DDX41-214ENST00000512334 EYA3Q99504 573 aa20.06■□□□□ 0.8
DDX41-214ENST00000512334 MPHOSPH8Q99549 860 aa20.06■□□□□ 0.8
DDX41-214ENST00000512334 BSDC1Q9NW68 430 aaPredicted RBP20.06■□□□□ 0.8
DDX41-214ENST00000512334 POLLQ9UGP5 575 aa20.06■□□□□ 0.8
DDX41-214ENST00000512334 GJA3Q9Y6H8 435 aa20.06■□□□□ 0.8
DDX41-214ENST00000512334 RIMBP2O15034 1052 aa20.05■□□□□ 0.8
DDX41-214ENST00000512334 BCAR3O75815 825 aa20.05■□□□□ 0.8
DDX41-214ENST00000512334 TOMM70O94826 608 aa20.05■□□□□ 0.8
DDX41-214ENST00000512334 UFL1O94874 794 aa20.05■□□□□ 0.8
DDX41-214ENST00000512334 CCT4P50991 539 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms