RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 UBE3BQ7Z3V4 1068 aa17.33■□□□□ 0.36
SNF8-206ENST00000509989 NMRK2Q9NPI5 230 aa17.33■□□□□ 0.36
SNF8-206ENST00000509989 LTBP3Q9NS15 1303 aa17.32■□□□□ 0.36
SNF8-206ENST00000509989 FKBP4Q02790 459 aaKnown RBP eCLIP17.32■□□□□ 0.36
SNF8-206ENST00000509989 LTBP1Q14766 1721 aa17.32■□□□□ 0.36
SNF8-206ENST00000509989 CDHR2Q9BYE9 1310 aa17.31■□□□□ 0.36
SNF8-206ENST00000509989 NEXNQ0ZGT2 675 aa17.31■□□□□ 0.36
SNF8-206ENST00000509989 GRAPQ13588 217 aa17.31■□□□□ 0.36
SNF8-206ENST00000509989 DDX46Q7L014 1031 aaKnown RBP17.31■□□□□ 0.36
SNF8-206ENST00000509989 LINS1Q8NG48 757 aa17.31■□□□□ 0.36
SNF8-206ENST00000509989 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
SNF8-206ENST00000509989 KIF3CO14782 793 aa17.3■□□□□ 0.36
SNF8-206ENST00000509989 PDE8AO60658 829 aa17.3■□□□□ 0.36
SNF8-206ENST00000509989 SLC4A10Q6U841 1118 aa17.3■□□□□ 0.36
SNF8-206ENST00000509989 GPBP1L1Q9HC44 474 aaPredicted RBP17.3■□□□□ 0.36
SNF8-206ENST00000509989 ATP6V0A2Q9Y487 856 aa17.3■□□□□ 0.36
SNF8-206ENST00000509989 EPHA10Q5JZY3 1008 aa17.29■□□□□ 0.36
SNF8-206ENST00000509989 TTLL11Q8NHH1 800 aa17.29■□□□□ 0.36
SNF8-206ENST00000509989 TNNQ9UQP3 1299 aa17.29■□□□□ 0.36
SNF8-206ENST00000509989 WTIPA6NIX2 430 aaPredicted RBP17.28■□□□□ 0.36
SNF8-206ENST00000509989 SOGA3Q5TF21 947 aa17.28■□□□□ 0.36
SNF8-206ENST00000509989 RTKN2Q8IZC4 609 aa17.28■□□□□ 0.36
SNF8-206ENST00000509989 GPR101Q96P66 508 aaPredicted RBP17.28■□□□□ 0.36
SNF8-206ENST00000509989 GREM2Q9H772 168 aa17.28■□□□□ 0.36
SNF8-206ENST00000509989 SMC4Q9NTJ3 1288 aa17.28■□□□□ 0.36
SNF8-206ENST00000509989 ZNF541Q9H0D2 1346 aa17.27■□□□□ 0.36
SNF8-206ENST00000509989 BBOX1O75936 387 aa17.27■□□□□ 0.36
SNF8-206ENST00000509989 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.36
SNF8-206ENST00000509989 CTSWP56202 376 aa17.27■□□□□ 0.36
SNF8-206ENST00000509989 SP8Q8IXZ3 490 aa17.27■□□□□ 0.36
SNF8-206ENST00000509989 A0A1B0GUL6 1792 aa17.27■□□□□ 0.35
SNF8-206ENST00000509989 POTECB2RU33 542 aa17.26■□□□□ 0.35
SNF8-206ENST00000509989 RARSP54136 660 aaKnown RBP17.26■□□□□ 0.35
SNF8-206ENST00000509989 GPSM2P81274 684 aa17.26■□□□□ 0.35
SNF8-206ENST00000509989 FOXO4P98177 505 aa17.26■□□□□ 0.35
SNF8-206ENST00000509989 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
SNF8-206ENST00000509989 PSMD1Q99460 953 aa17.26■□□□□ 0.35
SNF8-206ENST00000509989 RRAGCQ9HB90 399 aa17.26■□□□□ 0.35
SNF8-206ENST00000509989 WDR90Q96KV7 1748 aa17.25■□□□□ 0.35
SNF8-206ENST00000509989 BCAR3O75815 825 aa17.25■□□□□ 0.35
SNF8-206ENST00000509989 DDNO94850 711 aaPredicted RBP17.25■□□□□ 0.35
SNF8-206ENST00000509989 RPS8P62241 208 aaKnown RBP17.25■□□□□ 0.35
SNF8-206ENST00000509989 KAZALD1Q96I82 304 aa17.25■□□□□ 0.35
SNF8-206ENST00000509989 NOB1Q9ULX3 412 aaKnown RBP17.25■□□□□ 0.35
SNF8-206ENST00000509989 GLTPD2A6NH11 291 aa17.24■□□□□ 0.35
SNF8-206ENST00000509989 NBPF7P0C2Y1 421 aaPredicted RBP17.24■□□□□ 0.35
SNF8-206ENST00000509989 AOC3Q16853 763 aa17.24■□□□□ 0.35
SNF8-206ENST00000509989 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
SNF8-206ENST00000509989 CC2D2BQ6DHV5 1058 aa17.24■□□□□ 0.35
SNF8-206ENST00000509989 MPNDQ8N594 471 aa17.24■□□□□ 0.35
SNF8-206ENST00000509989 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
SNF8-206ENST00000509989 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
SNF8-206ENST00000509989 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
SNF8-206ENST00000509989 PLA2G12BQ9BX93 195 aa17.23■□□□□ 0.35
SNF8-206ENST00000509989 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
SNF8-206ENST00000509989 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
SNF8-206ENST00000509989 POLLQ9UGP5 575 aa17.23■□□□□ 0.35
SNF8-206ENST00000509989 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
SNF8-206ENST00000509989 GRM8O00222 908 aa17.22■□□□□ 0.35
SNF8-206ENST00000509989 CSF1RP07333 972 aa17.22■□□□□ 0.35
SNF8-206ENST00000509989 DPP8Q6V1X1 898 aaPredicted RBP17.22■□□□□ 0.35
SNF8-206ENST00000509989 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
SNF8-206ENST00000509989 PTPRCP08575 1304 aa17.21■□□□□ 0.35
SNF8-206ENST00000509989 PPIP5K2O43314 1243 aa17.21■□□□□ 0.35
SNF8-206ENST00000509989 ALDH1L1O75891 902 aa17.21■□□□□ 0.35
SNF8-206ENST00000509989 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.34
SNF8-206ENST00000509989 FZD9O00144 591 aa17.2■□□□□ 0.34
SNF8-206ENST00000509989 RIMBP2O15034 1052 aa17.2■□□□□ 0.34
SNF8-206ENST00000509989 ITGA6P23229 1130 aa17.2■□□□□ 0.34
SNF8-206ENST00000509989 C1QTNF8P60827 252 aa17.2■□□□□ 0.34
SNF8-206ENST00000509989 LMBR1LQ6UX01 489 aa17.2■□□□□ 0.34
SNF8-206ENST00000509989 LARGE2Q8N3Y3 721 aa17.2■□□□□ 0.34
SNF8-206ENST00000509989 ZNF594Q96JF6 807 aaPredicted RBP17.2■□□□□ 0.34
SNF8-206ENST00000509989 USP44Q9H0E7 712 aa17.2■□□□□ 0.34
SNF8-206ENST00000509989 RTL9Q8NET4 1388 aa17.19■□□□□ 0.34
SNF8-206ENST00000509989 CT47B1P0C2W7 299 aaPredicted RBP17.19■□□□□ 0.34
SNF8-206ENST00000509989 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
SNF8-206ENST00000509989 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
SNF8-206ENST00000509989 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
SNF8-206ENST00000509989 TBC1D16Q8TBP0 767 aa17.19■□□□□ 0.34
SNF8-206ENST00000509989 KCNQ5Q9NR82 932 aa17.19■□□□□ 0.34
SNF8-206ENST00000509989 C9orf78Q9NZ63 289 aaPredicted RBP17.19■□□□□ 0.34
SNF8-206ENST00000509989 UTYO14607 1347 aa17.19■□□□□ 0.34
SNF8-206ENST00000509989 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
SNF8-206ENST00000509989 YDJCA8MPS7 323 aa17.18■□□□□ 0.34
SNF8-206ENST00000509989 SNAP23O00161 211 aa17.18■□□□□ 0.34
SNF8-206ENST00000509989 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
SNF8-206ENST00000509989 ANKRD44Q8N8A2 993 aa17.18■□□□□ 0.34
SNF8-206ENST00000509989 ZNF646O15015 1829 aaPredicted RBP17.18■□□□□ 0.34
SNF8-206ENST00000509989 SCN4AP35499 1836 aa17.17■□□□□ 0.34
SNF8-206ENST00000509989 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
SNF8-206ENST00000509989 KIAA2012Q0VF49 1180 aa17.17■□□□□ 0.34
SNF8-206ENST00000509989 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
SNF8-206ENST00000509989 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
SNF8-206ENST00000509989 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
SNF8-206ENST00000509989 DOK7Q18PE1 504 aa17.16■□□□□ 0.34
SNF8-206ENST00000509989 TMC4Q7Z404 712 aa17.16■□□□□ 0.34
SNF8-206ENST00000509989 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
SNF8-206ENST00000509989 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
SNF8-206ENST00000509989 DBNDD1Q9H9R9 158 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms