RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 TMEM88BA6NKF7 163 aa16.32■□□□□ 0.2
KDM3B-206ENST00000509468 AOC3Q16853 763 aa16.32■□□□□ 0.2
KDM3B-206ENST00000509468 CCDC30Q5VVM6 783 aa16.32■□□□□ 0.2
KDM3B-206ENST00000509468 DDX58O95786 925 aaKnown RBP16.31■□□□□ 0.2
KDM3B-206ENST00000509468 USP50Q70EL3 339 aaPredicted RBP16.31■□□□□ 0.2
KDM3B-206ENST00000509468 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
KDM3B-206ENST00000509468 TAF1P21675 1872 aa16.31■□□□□ 0.2
KDM3B-206ENST00000509468 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
KDM3B-206ENST00000509468 CXCL9Q07325 125 aa16.3■□□□□ 0.2
KDM3B-206ENST00000509468 KIAA2012Q0VF49 1180 aa16.3■□□□□ 0.2
KDM3B-206ENST00000509468 TNIP1Q15025 636 aa16.3■□□□□ 0.2
KDM3B-206ENST00000509468 CCDC27Q2M243 656 aa16.3■□□□□ 0.2
KDM3B-206ENST00000509468 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
KDM3B-206ENST00000509468 ZBTB38Q8NAP3 1195 aaPredicted RBP16.3■□□□□ 0.2
KDM3B-206ENST00000509468 CCDC191Q8NCU4 936 aa16.3■□□□□ 0.2
KDM3B-206ENST00000509468 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
KDM3B-206ENST00000509468 PHAXQ9H814 394 aaKnown RBP16.3■□□□□ 0.2
KDM3B-206ENST00000509468 DDX60Q8IY21 1712 aaKnown RBP16.3■□□□□ 0.2
KDM3B-206ENST00000509468 COL4A5P29400 1685 aa16.3■□□□□ 0.2
KDM3B-206ENST00000509468 ADAMTSL1Q8N6G6 1762 aa16.29■□□□□ 0.2
KDM3B-206ENST00000509468 EPS15P42566 896 aa16.29■□□□□ 0.2
KDM3B-206ENST00000509468 SCNN1DP51172 638 aa16.29■□□□□ 0.2
KDM3B-206ENST00000509468 MAP1SQ66K74 1059 aaPredicted RBP16.29■□□□□ 0.2
KDM3B-206ENST00000509468 MKRN1Q9UHC7 482 aaKnown RBP16.29■□□□□ 0.2
KDM3B-206ENST00000509468 RPS8P62241 208 aaKnown RBP16.28■□□□□ 0.2
KDM3B-206ENST00000509468 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
KDM3B-206ENST00000509468 CIAPIN1Q6FI81 312 aa16.28■□□□□ 0.2
KDM3B-206ENST00000509468 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
KDM3B-206ENST00000509468 ADARB2Q9NS39 739 aaKnown RBP16.28■□□□□ 0.2
KDM3B-206ENST00000509468 GPRC5DQ9NZD1 345 aa16.28■□□□□ 0.2
KDM3B-206ENST00000509468 NSFL1CQ9UNZ2 370 aaKnown RBP16.28■□□□□ 0.2
KDM3B-206ENST00000509468 WASHC4Q2M389 1173 aa16.27■□□□□ 0.2
KDM3B-206ENST00000509468 CCDC184Q52MB2 194 aa16.27■□□□□ 0.2
KDM3B-206ENST00000509468 CELF1Q92879 486 aaKnown RBP16.27■□□□□ 0.2
KDM3B-206ENST00000509468 MYD88Q99836 296 aa16.27■□□□□ 0.2
KDM3B-206ENST00000509468 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.2
KDM3B-206ENST00000509468 CWC25Q9NXE8 425 aaPredicted RBP16.27■□□□□ 0.2
KDM3B-206ENST00000509468 ANP32CO43423 234 aa16.26■□□□□ 0.19
KDM3B-206ENST00000509468 HSPA1AP0DMV8 641 aaKnown RBP16.26■□□□□ 0.19
KDM3B-206ENST00000509468 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
KDM3B-206ENST00000509468 WWC1Q8IX03 1113 aa16.26■□□□□ 0.19
KDM3B-206ENST00000509468 BCL2L13Q9BXK5 485 aa16.26■□□□□ 0.19
KDM3B-206ENST00000509468 STK31Q9BXU1 1019 aa16.26■□□□□ 0.19
KDM3B-206ENST00000509468 CNTNAP1P78357 1384 aa16.26■□□□□ 0.19
KDM3B-206ENST00000509468 CDHR2Q9BYE9 1310 aa16.25■□□□□ 0.19
KDM3B-206ENST00000509468 ZNF316A6NFI3 1004 aaPredicted RBP16.25■□□□□ 0.19
KDM3B-206ENST00000509468 C6orf229H3BNL8 230 aa16.25■□□□□ 0.19
KDM3B-206ENST00000509468 PDE8AO60658 829 aa16.25■□□□□ 0.19
KDM3B-206ENST00000509468 PCCAP05165 728 aaPredicted RBP16.25■□□□□ 0.19
KDM3B-206ENST00000509468 DEFB115Q30KQ5 88 aa16.25■□□□□ 0.19
KDM3B-206ENST00000509468 CCDC152Q4G0S7 254 aa16.25■□□□□ 0.19
KDM3B-206ENST00000509468 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
KDM3B-206ENST00000509468 KSR2Q6VAB6 950 aa16.25■□□□□ 0.19
KDM3B-206ENST00000509468 EYA3Q99504 573 aa16.25■□□□□ 0.19
KDM3B-206ENST00000509468 LTBP1Q14766 1721 aa16.25■□□□□ 0.19
KDM3B-206ENST00000509468 IL16Q14005 1332 aa16.24■□□□□ 0.19
KDM3B-206ENST00000509468 RAD17O75943 681 aa16.24■□□□□ 0.19
KDM3B-206ENST00000509468 GMPSP49915 693 aaPredicted RBP16.24■□□□□ 0.19
KDM3B-206ENST00000509468 TSPYL6Q8N831 410 aa16.24■□□□□ 0.19
KDM3B-206ENST00000509468 MRS2Q9HD23 443 aa16.24■□□□□ 0.19
KDM3B-206ENST00000509468 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
KDM3B-206ENST00000509468 PCNTO95613 3336 aa16.24■□□□□ 0.19
KDM3B-206ENST00000509468 LRRC37AA6NMS7 1700 aa16.23■□□□□ 0.19
KDM3B-206ENST00000509468 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
KDM3B-206ENST00000509468 H7C1D1 291 aa16.23■□□□□ 0.19
KDM3B-206ENST00000509468 VEGFBP49765 207 aa16.23■□□□□ 0.19
KDM3B-206ENST00000509468 NEXNQ0ZGT2 675 aa16.23■□□□□ 0.19
KDM3B-206ENST00000509468 TWISTNBQ3B726 338 aaPredicted RBP16.23■□□□□ 0.19
KDM3B-206ENST00000509468 ZC3H15Q8WU90 426 aaKnown RBP16.23■□□□□ 0.19
KDM3B-206ENST00000509468 TSR2Q969E8 191 aaKnown RBP16.23■□□□□ 0.19
KDM3B-206ENST00000509468 ZC3H12CQ9C0D7 883 aaKnown RBP16.23■□□□□ 0.19
KDM3B-206ENST00000509468 PI4KAP2A4QPH2 592 aa16.22■□□□□ 0.19
KDM3B-206ENST00000509468 RIMBP2O15034 1052 aa16.22■□□□□ 0.19
KDM3B-206ENST00000509468 GPSM2P81274 684 aa16.22■□□□□ 0.19
KDM3B-206ENST00000509468 PI4KAP1Q8N8J0 262 aa16.22■□□□□ 0.19
KDM3B-206ENST00000509468 DPF2Q92785 391 aa16.22■□□□□ 0.19
KDM3B-206ENST00000509468 POLLQ9UGP5 575 aa16.22■□□□□ 0.19
KDM3B-206ENST00000509468 PGAP2Q9UHJ9 254 aa16.22■□□□□ 0.19
KDM3B-206ENST00000509468 CNOT7Q9UIV1 285 aaKnown RBP16.22■□□□□ 0.19
KDM3B-206ENST00000509468 ABT1Q9ULW3 272 aaKnown RBP16.22■□□□□ 0.19
KDM3B-206ENST00000509468 TRPM7Q96QT4 1865 aa16.21■□□□□ 0.19
KDM3B-206ENST00000509468 YDJCA8MPS7 323 aa16.21■□□□□ 0.19
KDM3B-206ENST00000509468 G3V3G9 751 aa16.21■□□□□ 0.19
KDM3B-206ENST00000509468 SLC4A2P04920 1241 aa16.21■□□□□ 0.19
KDM3B-206ENST00000509468 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.19
KDM3B-206ENST00000509468 WDR63Q8IWG1 891 aa16.21■□□□□ 0.19
KDM3B-206ENST00000509468 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.19
KDM3B-206ENST00000509468 PODXL2Q9NZ53 605 aa16.21■□□□□ 0.19
KDM3B-206ENST00000509468 ANKIB1Q9P2G1 1089 aa16.21■□□□□ 0.19
KDM3B-206ENST00000509468 CACNA1FO60840 1977 aa16.2■□□□□ 0.18
KDM3B-206ENST00000509468 TNS4Q8IZW8 715 aa16.2■□□□□ 0.18
KDM3B-206ENST00000509468 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
KDM3B-206ENST00000509468 AIDAQ96BJ3 306 aa16.2■□□□□ 0.18
KDM3B-206ENST00000509468 DBNDD1Q9H9R9 158 aa16.2■□□□□ 0.18
KDM3B-206ENST00000509468 SEC31BQ9NQW1 1179 aa16.2■□□□□ 0.18
KDM3B-206ENST00000509468 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
KDM3B-206ENST00000509468 RPS12P25398 132 aaKnown RBP16.19■□□□□ 0.18
KDM3B-206ENST00000509468 ANKRD18AQ8IVF6 992 aa16.19■□□□□ 0.18
KDM3B-206ENST00000509468 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
KDM3B-206ENST00000509468 WDR33Q9C0J8 1336 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms